![]() | BDGP Sequence Production Resources |
Search the DGRC for RE59545
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 595 |
Well: | 45 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14812-RA |
Protein status: | RE59545.pep: gold |
Preliminary Size: | 684 |
Sequenced Size: | 716 |
Gene | Date | Evidence |
---|---|---|
CG14812 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14812 | 2002-04-26 | Blastp of sequenced clone |
CG14812 | 2008-04-29 | Release 5.5 accounting |
CG14812 | 2008-08-15 | Release 5.9 accounting |
CG14812 | 2008-12-18 | 5.12 accounting |
716 bp (716 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113514
> RE59545.complete GGTCCTGTTCTTGCTTTGTTTTTTCACTGCGGAAATAACGACGTCGTCCA TGGAGCAGCAACTGGAGAAAGTCCTAGCGGAAATCGCCGCACGGCAGGAC ACAGTGGGAGCTCTGCTGGCCAATCGCCAGGGATTGTGTTTGGGCACCAA AGGAGACATTGATCCGAACGTGTCCGGCATCGGAATGGCCATTTCCGAGC AGGTGGCCAAACTGGAGCTGAATGCCACGGCTCCTGCAACGATTTGCCTT TACAGCGGAAACAAACGCTGTGTCATCCAGAAGGACGGCGAGATCACAGG CGTTATCTTCAAGCAGCCGACGGGTACATCGGCGACCGCCCCCAGCAACT AACGAAAGTTGGGGCCTCAATCGCAACTCTCAGGCCAAATACGCAAGTCA AAATACGGATACGGATACAAAGCCAGATACAGATACTTATATCTTCCAAG TCGCGCCCGCTTCGCTCGATTCGCCCGATGGTAGCGCCTGTTACATTTGT CGCTCATTCTAACCGATAGCCATTACCATAAGCATTGTTTTGTACGACTC GCATAGCATAAGCATTACGGATTACGCATTAAGCACTGCTGTTACTTGAT CTTGTTTGTCTTAACCAGTCTAGCGTCATCAACATGTACATAAAGACTTT GTACGATTAAGCCCCAGAAAGTAAACACAATGTACACCAATTAAAAAAAG AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1751819..1752249 | 695..265 | 2155 | 100 | Minus |
chrX | 22417052 | chrX | 1752404..1752521 | 264..147 | 590 | 100 | Minus |
chrX | 22417052 | chrX | 1752711..1752794 | 84..1 | 405 | 98.8 | Minus |
chrX | 22417052 | chrX | 1752579..1752640 | 146..85 | 310 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 1857976..1858406 | 695..265 | 2155 | 100 | Minus |
X | 23542271 | X | 1858561..1858678 | 264..147 | 590 | 100 | Minus |
X | 23542271 | X | 1858868..1858951 | 84..1 | 405 | 98.8 | Minus |
X | 23542271 | X | 1858736..1858797 | 146..85 | 310 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 1866074..1866504 | 695..265 | 2155 | 100 | Minus |
X | 23527363 | X | 1866659..1866776 | 264..147 | 590 | 100 | Minus |
X | 23527363 | X | 1866966..1867049 | 84..1 | 405 | 98.8 | Minus |
X | 23527363 | X | 1866834..1866895 | 146..85 | 310 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1751812..1752249 | 265..700 | 99 | <- | Minus |
chrX | 1752404..1752521 | 147..264 | 100 | <- | Minus |
chrX | 1752579..1752640 | 85..146 | 100 | <- | Minus |
chrX | 1752711..1752794 | 1..84 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14812-RA | 1..303 | 50..352 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14812-RA | 1..303 | 50..352 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14812-RA | 1..303 | 50..352 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14812-RA | 1..303 | 50..352 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14812-RA | 1..303 | 50..352 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14812-RA | 1..699 | 1..700 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14812-RA | 1..699 | 1..700 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14812-RA | 46..744 | 1..700 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14812-RA | 1..699 | 1..700 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14812-RA | 21..719 | 1..700 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1857969..1858406 | 265..700 | 99 | <- | Minus |
X | 1858561..1858678 | 147..264 | 100 | <- | Minus |
X | 1858736..1858797 | 85..146 | 100 | <- | Minus |
X | 1858868..1858951 | 1..84 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1857969..1858406 | 265..700 | 99 | <- | Minus |
X | 1858561..1858678 | 147..264 | 100 | <- | Minus |
X | 1858736..1858797 | 85..146 | 100 | <- | Minus |
X | 1858868..1858951 | 1..84 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1857969..1858406 | 265..700 | 99 | <- | Minus |
X | 1858561..1858678 | 147..264 | 100 | <- | Minus |
X | 1858736..1858797 | 85..146 | 100 | <- | Minus |
X | 1858868..1858951 | 1..84 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1752002..1752439 | 265..700 | 99 | <- | Minus |
arm_X | 1752594..1752711 | 147..264 | 100 | <- | Minus |
arm_X | 1752769..1752830 | 85..146 | 100 | <- | Minus |
arm_X | 1752901..1752984 | 1..84 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1866067..1866504 | 265..700 | 99 | <- | Minus |
X | 1866659..1866776 | 147..264 | 100 | <- | Minus |
X | 1866834..1866895 | 85..146 | 100 | <- | Minus |
X | 1866966..1867049 | 1..84 | 98 | Minus |
Translation from 0 to 351
> RE59545.hyp VLFLLCFFTAEITTSSMEQQLEKVLAEIAARQDTVGALLANRQGLCLGTK GDIDPNVSGIGMAISEQVAKLELNATAPATICLYSGNKRCVIQKDGEITG VIFKQPTGTSATAPSN*
Translation from 49 to 351
> RE59545.pep MEQQLEKVLAEIAARQDTVGALLANRQGLCLGTKGDIDPNVSGIGMAISE QVAKLELNATAPATICLYSGNKRCVIQKDGEITGVIFKQPTGTSATAPSN *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21078-PA | 100 | GF21078-PA | 1..88 | 1..88 | 402 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12679-PA | 100 | GG12679-PA | 1..100 | 1..100 | 488 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17852-PA | 99 | GH17852-PA | 1..89 | 1..89 | 397 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14812-PB | 100 | CG14812-PB | 1..100 | 1..100 | 502 | 100 | Plus |
CG14812-PA | 100 | CG14812-PA | 1..100 | 1..100 | 502 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10992-PA | 107 | GI10992-PA | 1..89 | 1..89 | 396 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26868-PA | 103 | GL26868-PA | 1..97 | 1..91 | 342 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13265-PA | 103 | GA13265-PA | 1..97 | 1..91 | 342 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18952-PA | 100 | GM18952-PA | 1..100 | 1..100 | 491 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24627-PA | 100 | GD24627-PA | 1..100 | 1..100 | 491 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19104-PA | 99 | GJ19104-PA | 1..99 | 1..100 | 404 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19795-PA | 101 | GK19795-PA | 1..97 | 1..97 | 369 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16509-PA | 100 | GE16509-PA | 1..100 | 1..100 | 486 | 96 | Plus |