BDGP Sequence Production Resources |
Search the DGRC for RE59650
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 596 |
Well: | 50 |
Vector: | pFlc-1 |
Associated Gene/Transcript | mRpS2-RA |
Protein status: | RE59650.pep: gold |
Preliminary Size: | 753 |
Sequenced Size: | 940 |
Gene | Date | Evidence |
---|---|---|
CG2937 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2937 | 2002-06-04 | Blastp of sequenced clone |
CG2937 | 2003-01-01 | Sim4 clustering to Release 3 |
mRpS2 | 2008-04-29 | Release 5.5 accounting |
mRpS2 | 2008-08-15 | Release 5.9 accounting |
mRpS2 | 2008-12-18 | 5.12 accounting |
940 bp (940 high quality bases) assembled on 2002-06-04
GenBank Submission: AY118630
> RE59650.complete AAAAATCGACGGAAAAGAAGAAGAACATAGGTTATGAAAACACGAGCCGC TCCAAAATGTTGAGAAAATCGTTTGCCAACCTACCCCGCTTTGGTCAGAT GTGCGGTCTGCCACGACGCCTGCAGAGCACACAGCCGGAGCAATCGGTGG AAACGGAACCGGAGGACATCGCCCTGGTGGAACAGCGGATTCTGAAGCAT CCGGACTACTTCCAAGTGCACAACCTGTTCACCGTGCGCGACCTCTTCAA TGCCCGAGTGCACTATGGCCACAAGGAGGGCTCCCTGGACGACCGAATGC GTCCGTACTTGTTCGGCAGTCGATTAGGTCATCTGATCTTCGATCTGGAC AAGACGGCATCACATCTGCGCGATGCCCTCAACTTTGCCGCACACATTGC CTTCCGAGATGGCATCATTCTGTTCTTCAACCGCAACGCCATGAACTCAC ATCTCGTGGAGCGAAAGGCCCAGGAGGCCGGTGAATTCTCGCACACTCGC TTTTGGCGCGGCGGCATCTTTACCAATGCCAATGTGCAATTCGATGCGGT CACCAGGCTGCCCGATCTTTGCATTTTCCTCAACACTCAAAACAACGTTA TGGCTCAGCACACGGCGGTTCGGGACGCCGCCAAAATGGCCATACCAACC ATTGGCATAGTGGACAGCAATTGCAATCCCAACCTGATCACCTATCCGGT GCCCGGCAACGATGACTCGCCGGCCGCAGTGGAGCTCTATTGCAACCTCT TCAAGGAAGCCATACTGCGTGGCAAGCGGGAACGACGCCAACTCCTTGGC CTTCCGCCTCTGGACGAATCCCAGCCGCGGCGCAGTCGCAAAACTAAGTA ATAGCCAAGTAGTAGTGTCAAGTTGATTTTGTTACATTTATCTTAATACA AATGCCAATGGCCGTCAATCCACGAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 4848556..4849398 | 82..924 | 99 | <- | Minus |
chr2L | 4849456..4849535 | 1..81 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS2-RA | 1..795 | 57..851 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS2-RA | 1..795 | 57..851 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS2-RA | 1..795 | 57..851 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS2-RA | 1..795 | 57..851 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS2-RA | 1..795 | 57..851 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS2-RA | 1..923 | 2..924 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS2-RA | 1..923 | 2..924 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS2-RA | 2..924 | 2..924 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS2-RA | 1..923 | 2..924 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS2-RA | 2..924 | 2..924 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4849439..4850281 | 82..924 | 99 | <- | Minus |
2L | 4850339..4850418 | 1..81 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4849439..4850281 | 82..924 | 99 | <- | Minus |
2L | 4850339..4850418 | 1..81 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4849439..4850281 | 82..924 | 99 | <- | Minus |
2L | 4850339..4850418 | 1..81 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 4849439..4850281 | 82..924 | 99 | <- | Minus |
arm_2L | 4850339..4850418 | 1..81 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4849439..4850281 | 82..924 | 99 | <- | Minus |
2L | 4850339..4850418 | 1..81 | 98 | Minus |
Translation from 2 to 850
> RE59650.hyp KSTEKKKNIGYENTSRSKMLRKSFANLPRFGQMCGLPRRLQSTQPEQSVE TEPEDIALVEQRILKHPDYFQVHNLFTVRDLFNARVHYGHKEGSLDDRMR PYLFGSRLGHLIFDLDKTASHLRDALNFAAHIAFRDGIILFFNRNAMNSH LVERKAQEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNTQNNVM AQHTAVRDAAKMAIPTIGIVDSNCNPNLITYPVPGNDDSPAAVELYCNLF KEAILRGKRERRQLLGLPPLDESQPRRSRKTK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpS2-PA | 264 | CG2937-PA | 1..264 | 19..282 | 1389 | 100 | Plus |
Translation from 56 to 850
> RE59650.pep MLRKSFANLPRFGQMCGLPRRLQSTQPEQSVETEPEDIALVEQRILKHPD YFQVHNLFTVRDLFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFDLDKT ASHLRDALNFAAHIAFRDGIILFFNRNAMNSHLVERKAQEAGEFSHTRFW RGGIFTNANVQFDAVTRLPDLCIFLNTQNNVMAQHTAVRDAAKMAIPTIG IVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRERRQLLGLP PLDESQPRRSRKTK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21552-PA | 265 | GF21552-PA | 1..264 | 1..264 | 1344 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24347-PA | 264 | GG24347-PA | 1..264 | 1..264 | 1382 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13663-PA | 267 | GH13663-PA | 1..258 | 1..261 | 1191 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpS2-PA | 264 | CG2937-PA | 1..264 | 1..264 | 1389 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21009-PA | 271 | GI21009-PA | 1..257 | 1..256 | 1216 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19496-PA | 278 | GL19496-PA | 1..269 | 1..261 | 1285 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15531-PA | 278 | GA15531-PA | 1..269 | 1..261 | 1285 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18067-PA | 265 | GM18067-PA | 1..264 | 1..264 | 1410 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22685-PA | 264 | GD22685-PA | 1..264 | 1..264 | 1415 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16130-PA | 271 | GJ16130-PA | 1..262 | 1..261 | 1213 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24593-PA | 275 | GK24593-PA | 1..275 | 1..264 | 1230 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14662-PA | 264 | GE14662-PA | 1..264 | 1..264 | 1405 | 99.2 | Plus |