BDGP Sequence Production Resources |
Search the DGRC for RE59709
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 597 |
Well: | 9 |
Vector: | pFlc-1 |
Associated Gene/Transcript | RpL32-RC |
Protein status: | RE59709.pep: gold |
Sequenced Size: | 762 |
Gene | Date | Evidence |
---|---|---|
CG7939 | 2004-01-14 | Blastp of sequenced clone |
RpL32 | 2008-04-29 | Release 5.5 accounting |
RpL32 | 2008-08-15 | Release 5.9 accounting |
RpL32 | 2008-12-18 | 5.12 accounting |
762 bp (762 high quality bases) assembled on 2004-01-14
GenBank Submission: BT011442
> RE59709.complete GCGGCAAGGTATGTGCGTGATTTTGGGCCCACGTGTATTTCCATTAATTT TAAGCCGTAATTGTCGTTTTTGGCGGTTTCGAGTTGAACTGCGTTAGTCC GTGCGCTGTTCGCAAGTGTGCGGCTCGTATTTCGACCGAATTCGGATCGA TTCCTGTGAGAGTTCGCCAAATGGCTTCTGTTTGTGATGGGAATTCGTGG GGCGACACACCGGCAACTCAATGGATACTGCCCAAGAAGCTAGCCCAACC TGCTTCAAGATGACCATCCGCCCAGCATACAGGCCCAAGATCGTGAAGAA GCGCACCAAGCACTTCATCCGCCACCAGTCGGATCGATATGCTAAGCTGT CGCACAAATGGCGCAAGCCCAAGGGTATCGACAACAGAGTGCGTCGCCGC TTCAAGGGACAGTATCTGATGCCCAACATCGGTTACGGATCGAACAAGCG CACCCGCCACATGCTGCCCACCGGATTCAAGAAGTTCCTGGTGCACAACG TGCGCGAGCTGGAGGTCCTGCTCATGCAGAACCGCGTTTACTGCGGCGAG ATCGCCCACGGCGTCTCCTCCAAGAAGCGCAAGGAGATTGTCGAGCGCGC CAAGCAGCTGTCGGTCCGCCTCACCAACCCCAACGGTCGCCTGCGTTCTC AAGAGAACGAGTAAGCTTAAGATTCTTGAGAGTTCTTGTAACGTGGTCGG AATACACATTTGTAAACGTTAATATACCGGACTTTTAGTTAAAAAACGAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL32-RC | 830 | RpL32-RC | 1..745 | 2..746 | 3710 | 99.8 | Plus |
RpL32.d | 1032 | RpL32.d | 291..789 | 248..746 | 2480 | 99.7 | Plus |
RpL32-RD | 774 | RpL32-RD | 291..774 | 248..731 | 2405 | 99.7 | Plus |
RpL32.d | 1032 | RpL32.d | 17..267 | 2..252 | 1240 | 99.6 | Plus |
RpL32-RD | 774 | RpL32-RD | 17..267 | 2..252 | 1240 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 25867646..25868040 | 746..352 | 1975 | 100 | Minus |
chr3R | 27901430 | chr3R | 25868305..25868555 | 252..2 | 1240 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 25868102..25868202 | 352..252 | 505 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 30045231..30045625 | 746..352 | 1975 | 100 | Minus |
3R | 32079331 | 3R | 30045890..30046140 | 252..2 | 1240 | 99.6 | Minus |
3R | 32079331 | 3R | 30045687..30045787 | 352..252 | 505 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 29786062..29786456 | 746..352 | 1975 | 100 | Minus |
3R | 31820162 | 3R | 29786721..29786971 | 252..2 | 1240 | 99.6 | Minus |
3R | 31820162 | 3R | 29786518..29786618 | 352..252 | 505 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 25868102..25868201 | 253..352 | 100 | <- | Minus |
chr3R | 25868305..25868555 | 1..252 | 99 | Minus | |
chr3R | 25867644..25868039 | 353..748 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL32-RC | 1..444 | 221..664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL32-RC | 1..444 | 221..664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL32-RC | 1..444 | 221..664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL32-RC | 1..444 | 221..664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL32-RC | 1..444 | 221..664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL32-RC | 1..747 | 2..748 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL32-RC | 1..747 | 2..748 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL32-RC | 1..747 | 2..748 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL32-RC | 1..747 | 2..748 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL32-RC | 1..747 | 2..748 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30045229..30045624 | 353..748 | 99 | <- | Minus |
3R | 30045687..30045786 | 253..352 | 100 | <- | Minus |
3R | 30045890..30046140 | 1..252 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30045229..30045624 | 353..748 | 99 | <- | Minus |
3R | 30045687..30045786 | 253..352 | 100 | <- | Minus |
3R | 30045890..30046140 | 1..252 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30045229..30045624 | 353..748 | 99 | <- | Minus |
3R | 30045687..30045786 | 253..352 | 100 | <- | Minus |
3R | 30045890..30046140 | 1..252 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 25871409..25871508 | 253..352 | 100 | <- | Minus |
arm_3R | 25871612..25871862 | 1..252 | 99 | Minus | |
arm_3R | 25870951..25871346 | 353..748 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29786060..29786455 | 353..748 | 99 | <- | Minus |
3R | 29786518..29786617 | 253..352 | 100 | <- | Minus |
3R | 29786721..29786971 | 1..252 | 99 | Minus |
Translation from 220 to 663
> RE59709.hyp MDTAQEASPTCFKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKP KGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVL LMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQENE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL32-PC | 147 | CG7939-PC | 1..147 | 1..147 | 775 | 100 | Plus |
RpL32-PD | 134 | CG7939-PD | 1..134 | 14..147 | 705 | 100 | Plus |
RpL32-PA | 134 | CG7939-PA | 1..134 | 14..147 | 705 | 100 | Plus |
RpL32-PB | 134 | CG7939-PB | 1..134 | 14..147 | 705 | 100 | Plus |
Translation from 220 to 663
> RE59709.pep MDTAQEASPTCFKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKP KGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVL LMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQENE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23239-PA | 134 | GF23239-PA | 1..134 | 14..147 | 703 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11969-PA | 134 | GG11969-PA | 1..134 | 14..147 | 707 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18400-PA | 134 | GH18400-PA | 1..134 | 14..147 | 699 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL32-PC | 147 | CG7939-PC | 1..147 | 1..147 | 775 | 100 | Plus |
RpL32-PD | 134 | CG7939-PD | 1..134 | 14..147 | 705 | 100 | Plus |
RpL32-PA | 134 | CG7939-PA | 1..134 | 14..147 | 705 | 100 | Plus |
RpL32-PB | 134 | CG7939-PB | 1..134 | 14..147 | 705 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23390-PA | 134 | GI23390-PA | 1..134 | 14..147 | 707 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\RpL32-PA | 134 | GL13481-PA | 1..134 | 14..147 | 698 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\RpL32-PB | 134 | GA20704-PB | 1..134 | 14..147 | 700 | 97.8 | Plus |
Dpse\RpL32-PA | 134 | GA20704-PA | 1..134 | 14..147 | 700 | 97.8 | Plus |
Dpse\GA27885-PA | 87 | GA27885-PA | 1..87 | 14..147 | 375 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12186-PA | 134 | GM12186-PA | 1..134 | 14..147 | 707 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\RpL32-PA | 134 | GD17388-PA | 1..134 | 14..147 | 707 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\RpL32-PA | 134 | GJ10385-PA | 1..134 | 14..147 | 707 | 100 | Plus |
Dvir\GJ22904-PA | 124 | GJ22904-PA | 86..124 | 107..145 | 146 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\RpL32-PA | 134 | GK13422-PA | 1..134 | 14..147 | 693 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\RpL32-PA | 134 | GE23418-PA | 1..134 | 14..147 | 707 | 100 | Plus |