BDGP Sequence Production Resources |
Search the DGRC for RE59932
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 599 |
Well: | 32 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG12121-RA |
Protein status: | RE59932.pep: gold |
Sequenced Size: | 2965 |
Gene | Date | Evidence |
---|---|---|
CG12121 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12121 | 2002-04-26 | Blastp of sequenced clone |
CG12121 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12121 | 2008-04-29 | Release 5.5 accounting |
CG12121 | 2008-08-15 | Release 5.9 accounting |
CG12121 | 2008-12-18 | 5.12 accounting |
2965 bp (2965 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113517
> RE59932.complete GCTTATATCGAAGAACGATAGACTTCGATAGATCACCTTTTTTCCCCCAG CAAAAAAGTAAAATTCTTTGGGGTTTTTATCAAGGTGAGGTGTGAATAAT AGGAACTGTGACGGCGGTCGCGGCAAATCGATTGCCGCATCTTGGATCGC AGCTAGCGCGGAACTCTGCGCCGGAACGTTCCGCCCGGAATCGCGGGGCA AAAGTGCCACGAAACGTCGCCGAAGAATAGAAGCGGAAAATTTGGGGAAA ATACGGAAAGATGTGGGCTCCCGGCGGGGATGTTAAATCAATAGTGGTGC TGGCGGCACTGACGGCGCTTCTCTGGGCCCCACTTGAGGTCCTTGGGCGG AAGCACCATCTGGAAGTGAGGAATGACCGTCGCCAGTACATCGCACTCAG CACCTTTGGATTCTACACTAATGGCCATTTGGATGTGCAGCTCAGCAAAT TGACTTTTGACAATGAGCAGTCTACAGATTTGATGGGTCTGTCGCTGGAT AAGACCACTATTGACCAGCTTAATCCCTATTTGGACTCGCATCAAAACAA ATGCATTCTCGAGGAATCACCTAAATCCCAGATCAGCGGACCCATTCTCT TCTTCGTGCTGGACCTCAAGGAGCTTAAAGTTCGTGTTAAGTGCTCCCCC GAATGGCACAATATGCACATCTACAACCAAATCCCGTCCAGAACCAAGCG GCACTCACACATGGCCAAGGTCAGCGATTCGGTTCTGTTTCGCCAGACCC GCGCTGCCCAAGATTTCTCCGCCGAGGGGCCAGATGAGTCCATGGAGGAT CCCTTGGAGCAAGAACCGACGGATTTAAAGTCTTCCTCGCCTGCTGCGGT TGCAGGCAAAATTGAGCTGCCCAAAGATGAAGGTGCACCCAAGGTAGATG CTCCTGCCCAAAATGTTGATGCTGTCAAAGAGGAGTCTGTTCCCAAGCCA GAAGTGGCTGCCAATCAGAATATTTCTGACAAGCAGGAACTGCCTCCCCC ACCAAATGCCGCCCCTAAAGTGGAGGAAGCCGTTAAGAGTGAACAGAAGC AGGAGGAAGCCCCCGCTGAAAAGGATGAAACCCCTTCGAAAAAGGAGGAA ACCCCAGCAAAGCAAGTATCCGTAGAAGAGCCAAAAGTCGCAGCCCCACC ACTGGCCGTAAATAGCCCAGCAGCTGCTCCGTCCCTAGATGATACTGAAG TTGACAAGAAAAATGAAGCCACCGATACGGACGCAGCTCCCGGAAACCCT TTCCCCCACGAAGGCGATTCCGAAGAAGATTCATATGGACCCGACTCCTT TAAGCAATCGCAAGAAAACCTTTGCAAGGATTCGACCATGCCGCTGGTCA GGGAGACCATCAACAATGTACACTACTACAGCTTCAACTTCTCTATGATG GTGGCCACGCCCAGTGATGAGGGCTTGTACAACCTTTACTTCCACGCCTG TCCCAATTATCACACCTCAAAAATAATGTCCTTCAATGTGGACATCGAGG AGAACAACAATGGCAACTATTTGTCGGCTGGAGAAATGCCCCTGCCAGCC TTGTACTTCATGATGAGCCTGCTCTTCTTTCTCTCCGGCCTCTTTTGGGT TTTCATTTTGAAGAAGAGCAAGCACACTGTGTACAAAATCCATTATTTGA TGGCCGTGCTGGTGTTCCTCAAGTCCCTCTCGCTGATGTTCCATTCGATC AACTATCACTTCATCGAAAAGCGGGGCGAGCATGTGGAGACCTGGGCCAT CCTTTACTACATTGCCCACCTGCTGAAGGGCGCCGTGCTCTTCATCACCA TCGTTTTGATTGGCACCGGCTGGACTTTTATTAAGCACATTCTCTCTGAC AAGGACAAGAAGATTTTCATGATCGTAATTCCACTGCAGGTTCTGGCCAA CGTGGCCCAGATCATTACGGACGAGTCTGATCAGAGCGACGCCGAGTTCC GTACCTGGCACAACATCTTCTTCTTCGTGGATCTGCTGTGCTGCGGCGCC ATTCTCTTTCCAATCGTATGGTCCATCCGACATCTACATGAGGCCTCTGC GACAGATGGCAAGGCGGCGATCAATTTGCGCAAGTTGAAGCTGTTCCGTC AGTTCTACATCATGATCGTGTGCTATATCTACTTCACGCGGATCATCGTC GATCTGCTGCAGATGACGGTGGTGTTCCAATACGCCTGGCTAGACGAGAT GTTCCGTGAGATGGCCACATACGTGTTCTTCGTGCTGACTGGCTACAAGT TCCGTCCAGTATCCTCGCATCCATACTTCACCGTGCCGGACGAAGACGAG GATGACGACGAGGTGGAGGTGCTTACCGAATCTGGTCTCACGGAGACGGT GCACCGTGTGAAGCAGCTAAACCGAAACCACGGAAGCGGCTTGGGCGGAA TCACCATCATCGAGGGCAACGATGATGAGCGCGAGAACCTGATTGCAAAG CGGGAATCAAGCCATGAGTACGATTAGGCCCCATAATGGAAGCCAATTGA TCTGCATCACCAATATTCCCTGCATTAGTCCGTAGTCTATAGTCCCCGGA GTCTTGGATATAATGACTCAAATTCTGAGCTAGTACTTTACCATTACTTT AATATATTTGTTTTATGTTCAGCGCATCTTAAGAGAAATCAATAAGAAAA TCAAAAGCAAACGCGATGGCCATGGAGGGGATAATCTCAGCATATAAACT TGTATAGGGCAACGTCGGCACAACGTTTGGTGGGCACCAACTGCTCCTCC ACCACCTCCTCCAGTGCCCGTCCAGTCACCAGCCAAGGAACCCTTGTAAA TAAATAATGAATCCGCTTAACGGAATACTGAACGCTTGTGACACCCAGGC CCTATCCTTGGTTTAAGATATACATATACATATAAATAAATACACTTATG TAATTACCTATAATTTTATGAATATAACAAAGCTTTAATATGTAAACCCA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 9120628..9121690 | 2949..1887 | 5300 | 99.9 | Minus |
chrX | 22417052 | chrX | 9122529..9123390 | 1490..629 | 4160 | 98.8 | Minus |
chrX | 22417052 | chrX | 9123835..9124205 | 371..1 | 1840 | 99.7 | Minus |
chrX | 22417052 | chrX | 9122009..9122282 | 1891..1618 | 1355 | 99.6 | Minus |
chrX | 22417052 | chrX | 9123456..9123599 | 625..482 | 690 | 98.6 | Minus |
chrX | 22417052 | chrX | 9122339..9122473 | 1622..1488 | 660 | 99.3 | Minus |
chrX | 22417052 | chrX | 9123660..9123771 | 482..371 | 545 | 99.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 9228794..9229858 | 2951..1887 | 5310 | 99.9 | Minus |
X | 23542271 | X | 9230697..9231558 | 1490..629 | 4310 | 100 | Minus |
X | 23542271 | X | 9232003..9232373 | 371..1 | 1840 | 99.7 | Minus |
X | 23542271 | X | 9230177..9230450 | 1891..1618 | 1355 | 99.6 | Minus |
X | 23542271 | X | 9231621..9231767 | 628..482 | 735 | 100 | Minus |
X | 23542271 | X | 9230507..9230641 | 1622..1488 | 675 | 100 | Minus |
X | 23542271 | X | 9231828..9231939 | 482..371 | 560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 9236892..9237956 | 2951..1887 | 5310 | 99.9 | Minus |
X | 23527363 | X | 9238795..9239656 | 1490..629 | 4310 | 100 | Minus |
X | 23527363 | X | 9240101..9240471 | 371..1 | 1840 | 99.7 | Minus |
X | 23527363 | X | 9238275..9238548 | 1891..1618 | 1355 | 99.6 | Minus |
X | 23527363 | X | 9239719..9239865 | 628..482 | 735 | 100 | Minus |
X | 23527363 | X | 9238605..9238739 | 1622..1488 | 675 | 100 | Minus |
X | 23527363 | X | 9239926..9240037 | 482..371 | 560 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9120628..9121687 | 1890..2949 | 99 | <- | Minus |
chrX | 9122011..9122278 | 1622..1889 | 100 | <- | Minus |
chrX | 9122340..9122473 | 1488..1621 | 99 | <- | Minus |
chrX | 9122532..9123390 | 629..1487 | 98 | <- | Minus |
chrX | 9123453..9123598 | 483..628 | 97 | <- | Minus |
chrX | 9123660..9123770 | 372..482 | 99 | <- | Minus |
chrX | 9123835..9124205 | 1..371 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12121-RA | 1..2217 | 261..2477 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12121-RA | 1..2217 | 261..2477 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12121-RA | 1..2217 | 261..2477 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12121-RA | 1..2217 | 261..2477 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12121-RA | 1..2217 | 261..2477 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12121-RA | 1..2949 | 1..2949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12121-RA | 1..2949 | 1..2949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12121-RA | 6..2954 | 1..2949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12121-RA | 1..2949 | 1..2949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12121-RA | 6..2954 | 1..2949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9232003..9232373 | 1..371 | 99 | Minus | |
X | 9228796..9229855 | 1890..2949 | 99 | <- | Minus |
X | 9230179..9230446 | 1622..1889 | 100 | <- | Minus |
X | 9230508..9230641 | 1488..1621 | 100 | <- | Minus |
X | 9230700..9231558 | 629..1487 | 100 | <- | Minus |
X | 9231621..9231766 | 483..628 | 100 | <- | Minus |
X | 9231828..9231938 | 372..482 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9232003..9232373 | 1..371 | 99 | Minus | |
X | 9228796..9229855 | 1890..2949 | 99 | <- | Minus |
X | 9230179..9230446 | 1622..1889 | 100 | <- | Minus |
X | 9230508..9230641 | 1488..1621 | 100 | <- | Minus |
X | 9230700..9231558 | 629..1487 | 100 | <- | Minus |
X | 9231621..9231766 | 483..628 | 100 | <- | Minus |
X | 9231828..9231938 | 372..482 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9232003..9232373 | 1..371 | 99 | Minus | |
X | 9228796..9229855 | 1890..2949 | 99 | <- | Minus |
X | 9230179..9230446 | 1622..1889 | 100 | <- | Minus |
X | 9230508..9230641 | 1488..1621 | 100 | <- | Minus |
X | 9230700..9231558 | 629..1487 | 100 | <- | Minus |
X | 9231621..9231766 | 483..628 | 100 | <- | Minus |
X | 9231828..9231938 | 372..482 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9124212..9124479 | 1622..1889 | 100 | <- | Minus |
arm_X | 9124541..9124674 | 1488..1621 | 100 | <- | Minus |
arm_X | 9122829..9123888 | 1890..2949 | 99 | <- | Minus |
arm_X | 9124733..9125591 | 629..1487 | 100 | <- | Minus |
arm_X | 9125654..9125799 | 483..628 | 100 | <- | Minus |
arm_X | 9125861..9125971 | 372..482 | 100 | <- | Minus |
arm_X | 9126036..9126406 | 1..371 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9239719..9239864 | 483..628 | 100 | <- | Minus |
X | 9239926..9240036 | 372..482 | 100 | <- | Minus |
X | 9240101..9240471 | 1..371 | 99 | Minus | |
X | 9236894..9237953 | 1890..2949 | 99 | <- | Minus |
X | 9238277..9238544 | 1622..1889 | 100 | <- | Minus |
X | 9238606..9238739 | 1488..1621 | 100 | <- | Minus |
X | 9238798..9239656 | 629..1487 | 100 | <- | Minus |
Translation from 260 to 2476
> RE59932.pep MWAPGGDVKSIVVLAALTALLWAPLEVLGRKHHLEVRNDRRQYIALSTFG FYTNGHLDVQLSKLTFDNEQSTDLMGLSLDKTTIDQLNPYLDSHQNKCIL EESPKSQISGPILFFVLDLKELKVRVKCSPEWHNMHIYNQIPSRTKRHSH MAKVSDSVLFRQTRAAQDFSAEGPDESMEDPLEQEPTDLKSSSPAAVAGK IELPKDEGAPKVDAPAQNVDAVKEESVPKPEVAANQNISDKQELPPPPNA APKVEEAVKSEQKQEEAPAEKDETPSKKEETPAKQVSVEEPKVAAPPLAV NSPAAAPSLDDTEVDKKNEATDTDAAPGNPFPHEGDSEEDSYGPDSFKQS QENLCKDSTMPLVRETINNVHYYSFNFSMMVATPSDEGLYNLYFHACPNY HTSKIMSFNVDIEENNNGNYLSAGEMPLPALYFMMSLLFFLSGLFWVFIL KKSKHTVYKIHYLMAVLVFLKSLSLMFHSINYHFIEKRGEHVETWAILYY IAHLLKGAVLFITIVLIGTGWTFIKHILSDKDKKIFMIVIPLQVLANVAQ IITDESDQSDAEFRTWHNIFFFVDLLCCGAILFPIVWSIRHLHEASATDG KAAINLRKLKLFRQFYIMIVCYIYFTRIIVDLLQMTVVFQYAWLDEMFRE MATYVFFVLTGYKFRPVSSHPYFTVPDEDEDDDEVEVLTESGLTETVHRV KQLNRNHGSGLGGITIIEGNDDERENLIAKRESSHEYD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19098-PA | 612 | GF19098-PA | 25..539 | 24..523 | 1480 | 61.5 | Plus |
Dana\GF19098-PA | 612 | GF19098-PA | 509..612 | 634..738 | 444 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18990-PA | 748 | GG18990-PA | 1..748 | 1..738 | 3610 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12704-PA | 693 | GH12704-PA | 11..693 | 7..738 | 2475 | 69 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12121-PA | 738 | CG12121-PA | 1..738 | 1..738 | 3863 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14468-PA | 319 | GI14468-PA | 1..319 | 419..738 | 1504 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18285-PA | 772 | GL18285-PA | 18..772 | 7..738 | 2622 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28126-PA | 772 | GA28126-PA | 18..772 | 7..738 | 2614 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22360-PA | 776 | GM22360-PA | 218..776 | 179..738 | 2929 | 97.5 | Plus |
Dsec\GM22360-PA | 776 | GM22360-PA | 1..85 | 1..85 | 440 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16074-PA | 692 | GD16074-PA | 1..692 | 1..738 | 3581 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18803-PA | 728 | GJ18803-PA | 11..728 | 7..738 | 2508 | 68.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25796-PA | 674 | GK25796-PA | 7..674 | 3..738 | 2488 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15463-PA | 735 | GE15463-PA | 1..735 | 1..738 | 3594 | 92.8 | Plus |
Translation from 260 to 2476
> RE59932.hyp MWAPGGDVKSIVVLAALTALLWAPLEVLGRKHHLEVRNDRRQYIALSTFG FYTNGHLDVQLSKLTFDNEQSTDLMGLSLDKTTIDQLNPYLDSHQNKCIL EESPKSQISGPILFFVLDLKELKVRVKCSPEWHNMHIYNQIPSRTKRHSH MAKVSDSVLFRQTRAAQDFSAEGPDESMEDPLEQEPTDLKSSSPAAVAGK IELPKDEGAPKVDAPAQNVDAVKEESVPKPEVAANQNISDKQELPPPPNA APKVEEAVKSEQKQEEAPAEKDETPSKKEETPAKQVSVEEPKVAAPPLAV NSPAAAPSLDDTEVDKKNEATDTDAAPGNPFPHEGDSEEDSYGPDSFKQS QENLCKDSTMPLVRETINNVHYYSFNFSMMVATPSDEGLYNLYFHACPNY HTSKIMSFNVDIEENNNGNYLSAGEMPLPALYFMMSLLFFLSGLFWVFIL KKSKHTVYKIHYLMAVLVFLKSLSLMFHSINYHFIEKRGEHVETWAILYY IAHLLKGAVLFITIVLIGTGWTFIKHILSDKDKKIFMIVIPLQVLANVAQ IITDESDQSDAEFRTWHNIFFFVDLLCCGAILFPIVWSIRHLHEASATDG KAAINLRKLKLFRQFYIMIVCYIYFTRIIVDLLQMTVVFQYAWLDEMFRE MATYVFFVLTGYKFRPVSSHPYFTVPDEDEDDDEVEVLTESGLTETVHRV KQLNRNHGSGLGGITIIEGNDDERENLIAKRESSHEYD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12121-PA | 738 | CG12121-PA | 1..738 | 1..738 | 3863 | 100 | Plus |