BDGP Sequence Production Resources |
Search the DGRC for RE60735
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 607 |
Well: | 35 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG12991-RA |
Protein status: | RE60735.pep: gold |
Sequenced Size: | 2374 |
Gene | Date | Evidence |
---|---|---|
CG12992 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12991 | 2002-04-26 | Blastp of sequenced clone |
CG12991 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12991 | 2008-04-29 | Release 5.5 accounting |
CG12991 | 2008-08-15 | Release 5.9 accounting |
CG12991 | 2008-12-18 | 5.12 accounting |
2374 bp (2374 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113530
> RE60735.complete ATAACGTTCGTGGATTTCGTGGGGAATAGCGGTCGACTCGCGCGGTCTCA TTTTTTTAACGTGCTTGTGTTGTGTGTGTGAATGTGTTTGGCGTGCGGCT AACACTGTTGTTGTCGAATTGTTGTTGTTGTTGGTAAAAACTTGCGCGCC ATTACTAACAGTAAATTAAAGGAGTATCACTGCAAAAAAAAAAAAAATTG AATACACGCAAATTTGAAAGCTGCGACCCAAAAAGTTGCATCTGAAGTGC AAGAAGGAAACAAATTAAATATTCACTAGGGCGGAATACTAAGGAAAACT CAAGCCACACACTGAGGAAATCAAAGTAGGAACAACTAAAACTCGTTTGG GAGCAGTCGTCGCAAAATCACAGAACGGGACGCATCATGACTTTCTACTG GTGGTCACACTGGTTCTGGATAACCCTGATCCTGAGTGTTAACTTGCTGT CCAGCCATGTCCACACATATCCCAGCCAGGAGGCGGAGTCACTGACCTCC AGCCCGCATACCCAATCCCAAACGCAGCCCGTGCGCACCACCAAGCTCTA CCAAACGACGGTCACCCAGATGTGGGGCCCAGCCACCCAGAGCAACATCA TGGACCTGACCCACCGACCCACCACCACACGGCCGGTGGTAACCCCCAGT TATGGTGGTGGCCCCCAATTGGCCCAGGTCCATGATGTTGAACAGGCAGT GGAGCTGCAGGAGGAGGATGAGGTGGTGGAGGAGGAGGAGCTGCCGCTCA ACGATCGTGACCAGCAGGAGCAGGATGAGATTCCCGATCAAGAGCGCCGG CAGGATGAGGCAGATGCAGATCCAGATGCGGATGCGGATATCGAGGACGC TGTAGCAAACGAGGAGCTGGCTCAATTCGAGTTCAAGCGATCGGCGGACT TCACCTCCGACCAGCTGAATAACTTTACGAATTTTAGCAGTAGCACTAGT ACAAATGGCAGCAGCAGCAGTAGCACCACCACAAAACCAGTTGCAATCAG CAGCAGTAGTCCGGCCAGCACAACAACCACCACCGCGAAAGTGTTGGCAA CATCGCCGGCAGCTGCAATAACACCACGGGCCGGAGGCAGTGCATCCACT TCCACGCCGGCTGGTTCCGCGGCTACGCCGTCCACGCCAAAGATCCACAC GGAATGGCTATCCGATGAGCTGCTGGCGGGTGCGACTGGTGGCCTGGGGT CAGCGGTCACGGTCGAGGGCGAAAAGGCGCCGTTCACCCTGGAAAATGCC AACAAGGAGGATGAACTTAGGCGTGCCGAAAGCGAGCATAGATCGCGAAA ATCGAAGGTTCTATCCGCGGAGTATAAGCACATCAATCGCTACATCAACT TCTCCGGCGACACCAAGAGTCTTCTGACCAGATCCGCCTCCGCGGCGCCC AGCGTGGCGGGGGGCGTGGCCGGATCCGGGTTCTACGACGGAGGCGTCGG CGACGAGGGCAATATCTCATCCGAGGCACTGGCCATTCAGCGAACGTACT TCCTGGATGCGGGTGCCATTTCGGCGATTTGCTTCACTGTCTTCGGCGTC TGCTGCACAGTGGGCACCATTGGGATCGTACTGTACCGTCGTCGGTATCT GAACAAACCGCAAGCGCTCAGCGAACCAGACTCGAGTGTCTATATCGATG ATAGCACGATGCGGGTGAGTGACAATTCGGATGAGATGTACAGCCTGGAC AACGACTCGTTTCTCAATTCGCTGGAGGCGATGACAATACAGAACTACTG GACGGATACGGTCAAACATACAAAGCTTTAATCTCCGGCCTTCCCCGTTG GAAGTCCAATCCCCTCTATCATTTATTGTACGTCTTTGGTTCGATTTCGA TTACGATTCTGTTTCGTTTCGCTGTTAAAATTCCATTCCTGATTTGACAA CCAGACATCATAATCATTAAGTAGCGTAGTTTTTAAGCGCGTGTATGTAT TTACTAATGTTAGGCAACCAAACGAGCAACTAGTTTAAGCCCAAAACTAC CAAAATTATGTTTAGTGTACGTGTAGATCCTAAGTGCGCAATGTTTTTGT TGGCCTTGACTGTTAGTTAAAGCCTTTCCCTAACAACTTCCCCACTAACC CGATTTTTGTAAACCAACCCATTGTACTCGTATCTGTTAGTTAATTATTA AACCTTATTTATATTGTTGACTATTTTATCGCCCTTCCCAACCCAAGTCT AATTTTAGAAAACACTATTTATTAAGTTTCCAACTTTGTGTCCAACAATT AAATGCAATCATTCCTTCCAGTTTAGCCTATAGAGCAACTTTACACTGTA ATTAATGTATTAAAAGCGAAGCAAGCAAACAACAATTAAAAGAAAACATC ACACAACCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12991-RA | 2470 | CG12991-RA | 22..2380 | 1..2359 | 11765 | 99.9 | Plus |
CG12991.a | 2754 | CG12991.a | 22..2380 | 1..2359 | 11765 | 99.9 | Plus |
CG12991-RB | 2262 | CG12991-RB | 132..2256 | 235..2359 | 10610 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 17487612..17488299 | 1671..2358 | 3440 | 100 | Plus |
chrX | 22417052 | chrX | 17486728..17487270 | 948..1490 | 2715 | 100 | Plus |
chrX | 22417052 | chrX | 17486153..17486664 | 438..949 | 2545 | 99.8 | Plus |
chrX | 22417052 | chrX | 17469207..17469441 | 1..235 | 1160 | 99.6 | Plus |
chrX | 22417052 | chrX | 17487352..17487535 | 1488..1671 | 905 | 99.5 | Plus |
chrX | 22417052 | chrX | 17478325..17478434 | 234..343 | 550 | 100 | Plus |
chrX | 22417052 | chrX | 17486001..17486099 | 344..442 | 480 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 17598268..17598956 | 1671..2359 | 3445 | 100 | Plus |
X | 23542271 | X | 17597384..17597926 | 948..1490 | 2715 | 100 | Plus |
X | 23542271 | X | 17596809..17597320 | 438..949 | 2560 | 100 | Plus |
X | 23542271 | X | 17579863..17580097 | 1..235 | 1160 | 99.6 | Plus |
X | 23542271 | X | 17598008..17598191 | 1488..1671 | 905 | 99.5 | Plus |
X | 23542271 | X | 17588986..17589095 | 234..343 | 550 | 100 | Plus |
X | 23542271 | X | 17596657..17596755 | 344..442 | 480 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 17606366..17607054 | 1671..2359 | 3445 | 100 | Plus |
X | 23527363 | X | 17605482..17606024 | 948..1490 | 2715 | 100 | Plus |
X | 23527363 | X | 17604907..17605418 | 438..949 | 2560 | 100 | Plus |
X | 23527363 | X | 17587961..17588195 | 1..235 | 1160 | 99.5 | Plus |
X | 23527363 | X | 17606106..17606289 | 1488..1671 | 905 | 99.4 | Plus |
X | 23527363 | X | 17597084..17597193 | 234..343 | 550 | 100 | Plus |
X | 23527363 | X | 17604755..17604853 | 344..442 | 480 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2329..2483 | 936..1083 | 191 | 61.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2323..2465 | 936..1086 | 178 | 60.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6896 | 936..1099 | 175 | 59.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6928 | 936..1080 | 169 | 61.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6756..6897 | 936..1076 | 166 | 63 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1056..1166 | 933..1039 | 166 | 64.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1074..1146 | 936..1008 | 157 | 71.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6822..6927 | 936..1038 | 126 | 60.4 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 978..1063 | 959..1036 | 122 | 67.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 17478327..17478434 | 236..343 | 100 | -> | Plus |
chrX | 17486001..17486095 | 344..438 | 100 | -> | Plus |
chrX | 17469207..17469441 | 1..235 | 99 | -> | Plus |
chrX | 17486154..17486664 | 439..949 | 99 | -> | Plus |
chrX | 17486730..17487270 | 950..1490 | 100 | -> | Plus |
chrX | 17487355..17487534 | 1491..1670 | 99 | -> | Plus |
chrX | 17487612..17488299 | 1671..2358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12991-RB | 1..1395 | 387..1781 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12991-RB | 1..1395 | 387..1781 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12991-RA | 1..1395 | 387..1781 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12991-RB | 1..1395 | 387..1781 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12991-RA | 1..1395 | 387..1781 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12991-RA | 6..2363 | 1..2358 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12991-RA | 6..2363 | 1..2358 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12991-RA | 3..2360 | 1..2358 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12991-RA | 6..2363 | 1..2358 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12991-RA | 3..2360 | 1..2358 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17579863..17580097 | 1..235 | 99 | -> | Plus |
X | 17588988..17589095 | 236..343 | 100 | -> | Plus |
X | 17596657..17596751 | 344..438 | 100 | -> | Plus |
X | 17596810..17597320 | 439..949 | 100 | -> | Plus |
X | 17597386..17597926 | 950..1490 | 100 | -> | Plus |
X | 17598011..17598190 | 1491..1670 | 99 | -> | Plus |
X | 17598268..17598955 | 1671..2358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17579863..17580097 | 1..235 | 99 | -> | Plus |
X | 17588988..17589095 | 236..343 | 100 | -> | Plus |
X | 17596657..17596751 | 344..438 | 100 | -> | Plus |
X | 17596810..17597320 | 439..949 | 100 | -> | Plus |
X | 17597386..17597926 | 950..1490 | 100 | -> | Plus |
X | 17598011..17598190 | 1491..1670 | 99 | -> | Plus |
X | 17598268..17598955 | 1671..2358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17579863..17580097 | 1..235 | 99 | -> | Plus |
X | 17588988..17589095 | 236..343 | 100 | -> | Plus |
X | 17596657..17596751 | 344..438 | 100 | -> | Plus |
X | 17596810..17597320 | 439..949 | 100 | -> | Plus |
X | 17597386..17597926 | 950..1490 | 100 | -> | Plus |
X | 17598011..17598190 | 1491..1670 | 99 | -> | Plus |
X | 17598268..17598955 | 1671..2358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 17473896..17474130 | 1..235 | 99 | -> | Plus |
arm_X | 17483021..17483128 | 236..343 | 100 | -> | Plus |
arm_X | 17490690..17490784 | 344..438 | 100 | -> | Plus |
arm_X | 17490843..17491353 | 439..949 | 100 | -> | Plus |
arm_X | 17491419..17491959 | 950..1490 | 100 | -> | Plus |
arm_X | 17492044..17492223 | 1491..1670 | 99 | -> | Plus |
arm_X | 17492301..17492988 | 1671..2358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17587961..17588195 | 1..235 | 99 | -> | Plus |
X | 17597086..17597193 | 236..343 | 100 | -> | Plus |
X | 17604755..17604849 | 344..438 | 100 | -> | Plus |
X | 17604908..17605418 | 439..949 | 100 | -> | Plus |
X | 17605484..17606024 | 950..1490 | 100 | -> | Plus |
X | 17606109..17606288 | 1491..1670 | 99 | -> | Plus |
X | 17606366..17607053 | 1671..2358 | 100 | Plus |
Translation from 386 to 1780
> RE60735.hyp MTFYWWSHWFWITLILSVNLLSSHVHTYPSQEAESLTSSPHTQSQTQPVR TTKLYQTTVTQMWGPATQSNIMDLTHRPTTTRPVVTPSYGGGPQLAQVHD VEQAVELQEEDEVVEEEELPLNDRDQQEQDEIPDQERRQDEADADPDADA DIEDAVANEELAQFEFKRSADFTSDQLNNFTNFSSSTSTNGSSSSSTTTK PVAISSSSPASTTTTTAKVLATSPAAAITPRAGGSASTSTPAGSAATPST PKIHTEWLSDELLAGATGGLGSAVTVEGEKAPFTLENANKEDELRRAESE HRSRKSKVLSAEYKHINRYINFSGDTKSLLTRSASAAPSVAGGVAGSGFY DGGVGDEGNISSEALAIQRTYFLDAGAISAICFTVFGVCCTVGTIGIVLY RRRYLNKPQALSEPDSSVYIDDSTMRVSDNSDEMYSLDNDSFLNSLEAMT IQNYWTDTVKHTKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12991-PF | 464 | CG12991-PF | 1..464 | 1..464 | 2385 | 100 | Plus |
CG12991-PB | 464 | CG12991-PB | 1..464 | 1..464 | 2385 | 100 | Plus |
CG12991-PA | 464 | CG12991-PA | 1..464 | 1..464 | 2385 | 100 | Plus |
CG12991-PE | 469 | CG12991-PE | 1..469 | 1..464 | 2364 | 98.7 | Plus |
CG12991-PD | 462 | CG12991-PD | 1..462 | 1..464 | 2364 | 99.6 | Plus |
Translation from 386 to 1780
> RE60735.pep MTFYWWSHWFWITLILSVNLLSSHVHTYPSQEAESLTSSPHTQSQTQPVR TTKLYQTTVTQMWGPATQSNIMDLTHRPTTTRPVVTPSYGGGPQLAQVHD VEQAVELQEEDEVVEEEELPLNDRDQQEQDEIPDQERRQDEADADPDADA DIEDAVANEELAQFEFKRSADFTSDQLNNFTNFSSSTSTNGSSSSSTTTK PVAISSSSPASTTTTTAKVLATSPAAAITPRAGGSASTSTPAGSAATPST PKIHTEWLSDELLAGATGGLGSAVTVEGEKAPFTLENANKEDELRRAESE HRSRKSKVLSAEYKHINRYINFSGDTKSLLTRSASAAPSVAGGVAGSGFY DGGVGDEGNISSEALAIQRTYFLDAGAISAICFTVFGVCCTVGTIGIVLY RRRYLNKPQALSEPDSSVYIDDSTMRVSDNSDEMYSLDNDSFLNSLEAMT IQNYWTDTVKHTKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22342-PA | 380 | GF22342-PA | 1..380 | 1..464 | 1202 | 61.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19120-PA | 463 | GG19120-PA | 1..463 | 1..464 | 2073 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12004-PA | 497 | GH12004-PA | 1..219 | 1..199 | 280 | 41.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12991-PF | 464 | CG12991-PF | 1..464 | 1..464 | 2385 | 100 | Plus |
CG12991-PB | 464 | CG12991-PB | 1..464 | 1..464 | 2385 | 100 | Plus |
CG12991-PA | 464 | CG12991-PA | 1..464 | 1..464 | 2385 | 100 | Plus |
CG12991-PE | 469 | CG12991-PE | 1..469 | 1..464 | 2364 | 98.7 | Plus |
CG12991-PD | 462 | CG12991-PD | 1..462 | 1..464 | 2364 | 99.6 | Plus |
CG12991-PC | 460 | CG12991-PC | 1..460 | 1..464 | 2349 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14634-PA | 468 | GI14634-PA | 1..468 | 1..464 | 1127 | 55.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13052-PA | 379 | GL13052-PA | 168..379 | 233..464 | 989 | 83.6 | Plus |
Dper\GL13052-PA | 379 | GL13052-PA | 1..74 | 1..79 | 252 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11960-PA | 446 | GA11960-PA | 1..446 | 1..464 | 1265 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13515-PA | 464 | GM13515-PA | 1..464 | 1..464 | 2410 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15673-PA | 464 | GD15673-PA | 1..464 | 1..464 | 2408 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19285-PA | 562 | GJ19285-PA | 112..562 | 1..464 | 1136 | 54.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19714-PA | 412 | GK19714-PA | 1..412 | 1..464 | 1179 | 59.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17672-PA | 473 | GE17672-PA | 1..473 | 1..464 | 1844 | 90.7 | Plus |