BDGP Sequence Production Resources |
Search the DGRC for RE60807
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 608 |
Well: | 7 |
Vector: | pFlc-1 |
Associated Gene/Transcript | eIF2B-beta-RA |
Protein status: | RE60807.pep: gold |
Preliminary Size: | 1059 |
Sequenced Size: | 1281 |
Gene | Date | Evidence |
---|---|---|
CG2677 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2677 | 2003-01-01 | Sim4 clustering to Release 3 |
eIF2B-beta | 2008-04-29 | Release 5.5 accounting |
eIF2B-beta | 2008-08-15 | Release 5.9 accounting |
eIF2B-beta | 2008-12-18 | 5.12 accounting |
1281 bp (1281 high quality bases) assembled on 2005-10-12
GenBank Submission: BT023929
> RE60807.complete AGAATTCGCTTTCGCCTGCCGCCTATCGATAACATTGCTCGGTGTGGCGA TTTCGTAAATAGTTTTCTAACTGAATAATGGTAACAGTTGGCCACTTTAG TTGATAATTCATAATTGCAAAGACCAGAGACGCCAGGACACGATGAAGGA ACAGCCGCTAAAGGAGATCACACAGCTCATCCACGCCATCAAAGTGGGGC TGGTGGAGGGATCCTACAACATAACCAACAAGACGCTGGACATCTTCAAG TACATCATCATGAGCAAGAGCTGGCAGAACGCCGATGCTCTCATGCAGAT TGTGCGCGACCAGTGTAAGATCCTGCAGGCAGCTCTGCCCCAGGAGACGG TTACCTCGAACATTGCCAGGCGGATCCTCAAGCTGACTCGCGAGGAGTTC GATCTGTTGCACGCCAAGGTGCAACACTTCGCGGACGACTCACAGGCCTC GCTGTCGCTTCACAAGCTAGTCACGCAGACCAGCGAGAGCAACGTCAGCG TAGATTACTCGGTGCCCCAGCATGGATTGCGGGAAGCGCTGCTCGACCAC CTGCAGGAGGTGGAAACGGAGCTGGAGACCAGTTCGGAGAACATCTGCGT CCAGGCCGAGGAGCACATCCATTCGTCGGAGATCATCTTGACACTGGGAC ACTCGCGCAGCGTCGAGAATTTCCTCAAAAGGGCGATCAAAAAGCGTCAG TTTCTCACCATCATCGTAGCCGAATGTGCGCCAGCCTGCCGGGGTCACAA TTTGGCCGCCAGCTTGGCCAACGAGAAGAATGTGGAGATTGTTGTGATCC CAGATGCGGCCATCTTCGCTATGATGTCGCGCGTCAACAAGGTAATAATC GGTACGCACAGCGTGCTGGCTAATGGAGGACTCAGAGCGGCGTGTGGAGC GTATACAGTGGCCCTGGCCGCCAAGCATTACTCCGTGCCGGTCATTGTAC TGGCGCCCATGTACAAACTCTCACCATTGCATCTGTGCGAGCAGGACGCC TTCAATATGGTCGGCTGTGCGGAGGATGTGATACCCTACGATTCGATTCC AGCGCGCGAAGCCAAGGTATACAGTCCCATGTTCGACTACGTGCCTCCGG AACTGGTCACCCTTTTCATATCCAACACCGGTGGCCATGCCCCCTCGTAT GTGTACCGCCTCCTTACGGAACTGTATCATCCCGAAGATTTGGAGATTTG AAATCGTGTTTGTCTCGTTGTTTTAGCAATTCTACCAATAAAGTCTACAG TAAAGTAGCAAGCCCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF2B-beta-RA | 1285 | eIF2B-beta-RA | 1..1266 | 1..1266 | 6330 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 2598809..2599266 | 286..743 | 2290 | 100 | Plus |
chrX | 22417052 | chrX | 2599355..2599741 | 742..1128 | 1935 | 100 | Plus |
chrX | 22417052 | chrX | 2598392..2598590 | 1..199 | 995 | 100 | Plus |
chrX | 22417052 | chrX | 2599810..2599946 | 1129..1265 | 685 | 100 | Plus |
chrX | 22417052 | chrX | 2598652..2598739 | 198..285 | 440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 2704993..2705450 | 286..743 | 2290 | 100 | Plus |
X | 23542271 | X | 2705539..2705925 | 742..1128 | 1935 | 100 | Plus |
X | 23542271 | X | 2704576..2704774 | 1..199 | 995 | 100 | Plus |
X | 23542271 | X | 2705994..2706131 | 1129..1266 | 690 | 100 | Plus |
X | 23542271 | X | 2704836..2704923 | 198..285 | 440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 2713091..2713548 | 286..743 | 2290 | 100 | Plus |
X | 23527363 | X | 2713637..2714023 | 742..1128 | 1935 | 100 | Plus |
X | 23527363 | X | 2712674..2712872 | 1..199 | 995 | 100 | Plus |
X | 23527363 | X | 2714092..2714229 | 1129..1266 | 690 | 100 | Plus |
X | 23527363 | X | 2712934..2713021 | 198..285 | 440 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 2598653..2598739 | 199..285 | 100 | -> | Plus |
chrX | 2598809..2599265 | 286..742 | 100 | -> | Plus |
chrX | 2598392..2598589 | 1..198 | 100 | -> | Plus |
chrX | 2599356..2599741 | 743..1128 | 100 | -> | Plus |
chrX | 2599810..2599946 | 1129..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-beta-RA | 1..1059 | 143..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-beta-RA | 1..1059 | 143..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-beta-RA | 1..1059 | 143..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-beta-RA | 1..1059 | 143..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-beta-RA | 1..1059 | 143..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-beta-RA | 1..1201 | 1..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-beta-RA | 1..1265 | 1..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-beta-RA | 6..1270 | 1..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-beta-RA | 1..1201 | 1..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF2B-beta-RA | 6..1270 | 1..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2704576..2704773 | 1..198 | 100 | -> | Plus |
X | 2704837..2704923 | 199..285 | 100 | -> | Plus |
X | 2704993..2705449 | 286..742 | 100 | -> | Plus |
X | 2705540..2705925 | 743..1128 | 100 | -> | Plus |
X | 2705994..2706130 | 1129..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2704576..2704773 | 1..198 | 100 | -> | Plus |
X | 2704837..2704923 | 199..285 | 100 | -> | Plus |
X | 2704993..2705449 | 286..742 | 100 | -> | Plus |
X | 2705540..2705925 | 743..1128 | 100 | -> | Plus |
X | 2705994..2706130 | 1129..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2704576..2704773 | 1..198 | 100 | -> | Plus |
X | 2704837..2704923 | 199..285 | 100 | -> | Plus |
X | 2704993..2705449 | 286..742 | 100 | -> | Plus |
X | 2705540..2705925 | 743..1128 | 100 | -> | Plus |
X | 2705994..2706130 | 1129..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 2598609..2598806 | 1..198 | 100 | -> | Plus |
arm_X | 2598870..2598956 | 199..285 | 100 | -> | Plus |
arm_X | 2599026..2599482 | 286..742 | 100 | -> | Plus |
arm_X | 2599573..2599958 | 743..1128 | 100 | -> | Plus |
arm_X | 2600027..2600163 | 1129..1265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2713091..2713547 | 286..742 | 100 | -> | Plus |
X | 2713638..2714023 | 743..1128 | 100 | -> | Plus |
X | 2714092..2714228 | 1129..1265 | 100 | Plus | |
X | 2712674..2712871 | 1..198 | 100 | -> | Plus |
X | 2712935..2713021 | 199..285 | 100 | -> | Plus |
Translation from 142 to 1200
> RE60807.pep MKEQPLKEITQLIHAIKVGLVEGSYNITNKTLDIFKYIIMSKSWQNADAL MQIVRDQCKILQAALPQETVTSNIARRILKLTREEFDLLHAKVQHFADDS QASLSLHKLVTQTSESNVSVDYSVPQHGLREALLDHLQEVETELETSSEN ICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFLTIIVAECAPACR GHNLAASLANEKNVEIVVIPDAAIFAMMSRVNKVIIGTHSVLANGGLRAA CGAYTVALAAKHYSVPVIVLAPMYKLSPLHLCEQDAFNMVGCAEDVIPYD SIPAREAKVYSPMFDYVPPELVTLFISNTGGHAPSYVYRLLTELYHPEDL EI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22448-PA | 352 | GF22448-PA | 1..352 | 1..352 | 1830 | 97.4 | Plus |
Dana\GF16217-PA | 306 | GF16217-PA | 97..305 | 130..345 | 183 | 27.2 | Plus |
Dana\GF13053-PA | 655 | GF13053-PA | 424..633 | 124..327 | 154 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18621-PA | 352 | GG18621-PA | 1..352 | 1..352 | 1853 | 98.6 | Plus |
Dere\GG11983-PA | 306 | GG11983-PA | 97..305 | 130..345 | 184 | 27.6 | Plus |
Dere\GG22851-PA | 630 | GG22851-PA | 399..608 | 124..327 | 167 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12777-PA | 352 | GH12777-PA | 1..352 | 1..352 | 1744 | 91.8 | Plus |
Dgri\GH22202-PA | 306 | GH22202-PA | 97..305 | 130..345 | 182 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF2Bbeta-PA | 352 | CG2677-PA | 1..352 | 1..352 | 1787 | 100 | Plus |
eIF2Bdelta-PD | 576 | CG10315-PD | 306..554 | 89..327 | 183 | 23.2 | Plus |
eIF2Bdelta-PB | 576 | CG10315-PB | 306..554 | 89..327 | 183 | 23.2 | Plus |
eIF2Bdelta-PC | 576 | CG10315-PC | 306..554 | 89..327 | 183 | 23.2 | Plus |
eIF2Bdelta-PA | 626 | CG10315-PA | 356..604 | 89..327 | 183 | 23.2 | Plus |
eIF2Balpha-PA | 306 | CG7883-PA | 97..305 | 130..345 | 180 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15870-PA | 352 | GI15870-PA | 1..352 | 1..352 | 1739 | 92 | Plus |
Dmoj\GI21971-PA | 306 | GI21971-PA | 97..305 | 130..345 | 185 | 27 | Plus |
Dmoj\GI20509-PA | 643 | GI20509-PA | 412..621 | 124..327 | 163 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19913-PA | 352 | GL19913-PA | 1..352 | 1..352 | 1814 | 96 | Plus |
Dper\GL13494-PA | 306 | GL13494-PA | 110..305 | 143..345 | 179 | 27.6 | Plus |
Dper\GL16909-PA | 632 | GL16909-PA | 401..610 | 124..327 | 178 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15423-PA | 352 | GA15423-PA | 1..352 | 1..352 | 1814 | 96 | Plus |
Dpse\GA20657-PA | 306 | GA20657-PA | 110..305 | 143..345 | 179 | 27.6 | Plus |
Dpse\GA10239-PA | 572 | GA10239-PA | 341..550 | 124..327 | 177 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19241-PA | 352 | GM19241-PA | 1..352 | 1..352 | 1870 | 99.7 | Plus |
Dsec\GM12201-PA | 306 | GM12201-PA | 97..305 | 130..345 | 184 | 27.6 | Plus |
Dsec\GM16009-PA | 630 | GM16009-PA | 399..608 | 124..327 | 161 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16616-PA | 352 | GD16616-PA | 1..352 | 1..352 | 1870 | 99.7 | Plus |
Dsim\GD17524-PA | 306 | GD17524-PA | 97..305 | 130..345 | 184 | 27.6 | Plus |
Dsim\GD11760-PA | 630 | GD11760-PA | 399..608 | 124..327 | 164 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18516-PA | 352 | GJ18516-PA | 1..352 | 1..352 | 1740 | 91.8 | Plus |
Dvir\GJ14332-PA | 306 | GJ14332-PA | 97..305 | 130..345 | 188 | 27.6 | Plus |
Dvir\GJ22361-PA | 593 | GJ22361-PA | 363..571 | 125..327 | 152 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19802-PA | 352 | GK19802-PA | 1..352 | 1..352 | 1782 | 93.8 | Plus |
Dwil\GK14086-PA | 306 | GK14086-PA | 97..305 | 130..345 | 192 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16274-PA | 352 | GE16274-PA | 1..352 | 1..352 | 1861 | 98.9 | Plus |
Dyak\GE10409-PA | 306 | GE10409-PA | 97..305 | 130..345 | 183 | 27.6 | Plus |
Dyak\GE14287-PA | 636 | GE14287-PA | 405..614 | 124..327 | 167 | 27.2 | Plus |
Translation from 142 to 1200
> RE60807.hyp MKEQPLKEITQLIHAIKVGLVEGSYNITNKTLDIFKYIIMSKSWQNADAL MQIVRDQCKILQAALPQETVTSNIARRILKLTREEFDLLHAKVQHFADDS QASLSLHKLVTQTSESNVSVDYSVPQHGLREALLDHLQEVETELETSSEN ICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFLTIIVAECAPACR GHNLAASLANEKNVEIVVIPDAAIFAMMSRVNKVIIGTHSVLANGGLRAA CGAYTVALAAKHYSVPVIVLAPMYKLSPLHLCEQDAFNMVGCAEDVIPYD SIPAREAKVYSPMFDYVPPELVTLFISNTGGHAPSYVYRLLTELYHPEDL EI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF2B-beta-PA | 352 | CG2677-PA | 1..352 | 1..352 | 1787 | 100 | Plus |
eIF2B-delta-PD | 576 | CG10315-PD | 306..554 | 89..327 | 183 | 23.2 | Plus |
eIF2B-delta-PB | 576 | CG10315-PB | 306..554 | 89..327 | 183 | 23.2 | Plus |
eIF2B-delta-PC | 576 | CG10315-PC | 306..554 | 89..327 | 183 | 23.2 | Plus |
eIF2B-alpha-PA | 306 | CG7883-PA | 97..305 | 130..345 | 180 | 27.6 | Plus |