BDGP Sequence Production Resources |
Search the DGRC for RE61190
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 611 |
Well: | 90 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG10311-RA |
Protein status: | RE61190.pep: gold |
Preliminary Size: | 719 |
Sequenced Size: | 977 |
Gene | Date | Evidence |
---|---|---|
CG10311 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10311 | 2002-04-26 | Blastp of sequenced clone |
CG10311 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10311 | 2008-04-29 | Release 5.5 accounting |
CG10311 | 2008-08-15 | Release 5.9 accounting |
CG10311 | 2008-12-18 | 5.12 accounting |
977 bp (977 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113535
> RE61190.complete AGTCGCTCCGTGAAACCCGTCGCACTCACATCGAAATCGCGCGCAAGTCG TCGGATCCAAATCGCCTCGAAACGCTACGCACTTGGAGGAGGCAAATATC AAATATATGAGAATAATTAGTTAGGAGGCAGCCGAATCAGCGGAATCAAA TCGATTTCCCTCGACTGCATTTAGCAGTGCTGCACCATCAAATCAAAAAT AAATTAGAAAGTCTGGTAATCACAATATAGATTTGCCAAAATGCCGAAGC CACTGTTAAATTCGTGCTGTCTGTGCCAATCGACCCGGAATGGCTCCGTT ATCTCGGGCATACTGGCGATAGTCCTGTCGATCATCACCATCGTGGTGAT CTTCACGACGCGGGTGCACTTCAAGACGATAATCTTTGACTTCATCCCCA ATGACATTGTTAAGATAATTCTAGTCATCAATTTGTGCATGACGATCTTG ATATCGCTGCTCATGATCATTGGTGCCCTGAAGCGGAACCACTACCTGAT GGTTCCATGGGTGGTCCTCGGCATTATGATTGCCATCGGTCTGCTGATCT CCGTCATCTACACGGGCATCGTCTTCTTCATCGACGGCTACGTGCTGACG GGAGTCCTCTGGCTGATCTTCGGCCTAATTGTCTGCGCGATTATGACCTA TTGCTGGTGCGTGGTCTATAGTGAATACGCCAACCTGTCCGAGGAGAACG AGCGCGGTCGTTACAACAAGCAGCCGTACCGTCGCTAGAATCTCCAGGAG CACTATTCATCAGAAATTGCATTCAAGAAGCTGAATCCACCACCCACACA TCTTCATCCTAGCTTCCTATGTTCGTTTTTAGTGATTATGTCTAACTAAT AATTATAATTTAGTTGAGGCGAGCCAGCCCTTCGCTCACATCGAATTTAC GCGGCCCGTGGCATTAAGTGCAATGGAATTATGTATTTAACATTTAAATA AAACTTTAATCCAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 12175602..12175927 | 962..637 | 1615 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 12176786..12177044 | 483..225 | 1295 | 100 | Minus |
chr3R | 27901430 | chr3R | 12181491..12181702 | 212..1 | 1045 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 12176575..12176730 | 637..482 | 780 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 16350905..16351231 | 963..637 | 1635 | 100 | Minus |
3R | 32079331 | 3R | 16352089..16352359 | 483..213 | 1355 | 100 | Minus |
3R | 32079331 | 3R | 16356800..16357011 | 212..1 | 1060 | 100 | Minus |
3R | 32079331 | 3R | 16351878..16352033 | 637..482 | 780 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 16091736..16092062 | 963..637 | 1635 | 100 | Minus |
3R | 31820162 | 3R | 16092920..16093190 | 483..213 | 1355 | 100 | Minus |
3R | 31820162 | 3R | 16097631..16097842 | 212..1 | 1060 | 100 | Minus |
3R | 31820162 | 3R | 16092709..16092864 | 637..482 | 780 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 12175602..12175926 | 638..962 | 99 | <- | Minus |
chr3R | 12176575..12176728 | 484..637 | 100 | <- | Minus |
chr3R | 12176786..12177052 | 220..483 | 98 | <- | Minus |
chr3R | 12181487..12181702 | 1..219 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10311-RA | 1..498 | 241..738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10311-RA | 1..498 | 241..738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10311-RA | 1..498 | 241..738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10311-RA | 1..498 | 241..738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10311-RA | 1..498 | 241..738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10311-RA | 1..962 | 1..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10311-RA | 1..962 | 1..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10311-RA | 5..966 | 1..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10311-RA | 1..962 | 1..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10311-RA | 5..966 | 1..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16350906..16351230 | 638..962 | 100 | <- | Minus |
3R | 16351878..16352031 | 484..637 | 100 | <- | Minus |
3R | 16352089..16352359 | 213..483 | 100 | <- | Minus |
3R | 16356800..16357011 | 1..212 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16350906..16351230 | 638..962 | 100 | <- | Minus |
3R | 16351878..16352031 | 484..637 | 100 | <- | Minus |
3R | 16352089..16352359 | 213..483 | 100 | <- | Minus |
3R | 16356800..16357011 | 1..212 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16350906..16351230 | 638..962 | 100 | <- | Minus |
3R | 16351878..16352031 | 484..637 | 100 | <- | Minus |
3R | 16352089..16352359 | 213..483 | 100 | <- | Minus |
3R | 16356800..16357011 | 1..212 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 12182522..12182733 | 1..212 | 100 | Minus | |
arm_3R | 12176628..12176952 | 638..962 | 100 | <- | Minus |
arm_3R | 12177600..12177753 | 484..637 | 100 | <- | Minus |
arm_3R | 12177811..12178081 | 213..483 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16091737..16092061 | 638..962 | 100 | <- | Minus |
3R | 16092709..16092862 | 484..637 | 100 | <- | Minus |
3R | 16092920..16093190 | 213..483 | 100 | <- | Minus |
3R | 16097631..16097842 | 1..212 | 100 | Minus |
Translation from 240 to 737
> RE61190.pep MPKPLLNSCCLCQSTRNGSVISGILAIVLSIITIVVIFTTRVHFKTIIFD FIPNDIVKIILVINLCMTILISLLMIIGALKRNHYLMVPWVVLGIMIAIG LLISVIYTGIVFFIDGYVLTGVLWLIFGLIVCAIMTYCWCVVYSEYANLS EENERGRYNKQPYRR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16523-PA | 165 | GF16523-PA | 1..165 | 1..165 | 792 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20037-PA | 165 | GG20037-PA | 1..165 | 1..165 | 829 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14526-PA | 165 | GH14526-PA | 1..165 | 1..165 | 794 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10311-PB | 165 | CG10311-PB | 1..165 | 1..165 | 852 | 100 | Plus |
CG10311-PA | 165 | CG10311-PA | 1..165 | 1..165 | 852 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24648-PA | 165 | GI24648-PA | 1..165 | 1..165 | 724 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22247-PA | 165 | GL22247-PA | 1..165 | 1..165 | 803 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10238-PA | 165 | GA10238-PA | 1..165 | 1..165 | 803 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15442-PA | 165 | GM15442-PA | 1..165 | 1..165 | 826 | 98.2 | Plus |
Dsec\GM19763-PA | 72 | GM19763-PA | 1..46 | 96..141 | 171 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20297-PA | 165 | GD20297-PA | 1..165 | 1..165 | 833 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23470-PA | 165 | GJ23470-PA | 1..165 | 1..165 | 748 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13509-PA | 165 | GK13509-PA | 1..165 | 1..165 | 786 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26321-PA | 165 | GE26321-PA | 1..165 | 1..165 | 838 | 100 | Plus |
Translation from 240 to 737
> RE61190.hyp MPKPLLNSCCLCQSTRNGSVISGILAIVLSIITIVVIFTTRVHFKTIIFD FIPNDIVKIILVINLCMTILISLLMIIGALKRNHYLMVPWVVLGIMIAIG LLISVIYTGIVFFIDGYVLTGVLWLIFGLIVCAIMTYCWCVVYSEYANLS EENERGRYNKQPYRR*