BDGP Sequence Production Resources |
Search the DGRC for RE61294
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 612 |
Well: | 94 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG8112-RB |
Protein status: | RE61294.pep: gold |
Preliminary Size: | 1885 |
Sequenced Size: | 2102 |
Gene | Date | Evidence |
---|---|---|
CG8112 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8112 | 2002-04-26 | Blastp of sequenced clone |
CG8112 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8112 | 2008-04-29 | Release 5.5 accounting |
CG8112 | 2008-08-15 | Release 5.9 accounting |
CG8112 | 2008-12-18 | 5.12 accounting |
2102 bp (2102 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113537
> RE61294.complete ATAGATTTCGCTTCGGTCCCGGTTTGTTTTGGTCAGCATTTACTCAACAT ATTTTAGGAATAATGAACCCCCTTTGCCTGAGACTCTGATGGTTTGCAGC ACAATCTTCGATGTTCGAATTCGGCGCCCCTGCTGATAAGTCAGCAAAGC GCCGTTATCGTCGCGGATTTGAAAACAACACAGCCGCACCAGCGACGCGT ACATTGTGCGAACTGACGTCCCCGGGGGCAGTCGCTGCTGTAAAATCCAC CAGTTGGATAGGATTGACATTAACACCAAAGGAACAGTTTCACTAGCAGA AGCGCACATAATTTGAGAACCAGACATGGCCGCTGAAAGGCAGGAGAAAC GAGGCGAGGAGGAGACGCAGCCCAGGTTGCCCGACCTCGGCTTTGTGCGC GACAAGCTTCAGAAGTTCCAGTCCAAGATGCTGACCGACTTCGAGCAGCG GCTGTCCTGCATGGTAGAGGATGTGCTGCAGGATCTGCGACAGCGCGAGT TGCGTGCCCACGAGTTCCCCAACTTCGAGAGATCCGATCGGAAGAGCACC TGGCACAATCGCGTGACCAGTCAAGCGCCAGCAGACGTCAGCGACTCCAC AAATGGCCATGCAAATGGCACGCATCCAAGGCCACCGATCCAAAGCGAAA CATCCGCTCGTAAGCAGCGACGACAACTGCCCGAAAAAGTGTTCGTTGCC CGGGAATCGTACCTCACCGCTCTGCTGCAGGTGGAGCACATGCGCACCAT CTACCACATCTTTTATATTATTCTGGTCATGTTCCTGCTGAACGTGATCT GCTACGATTACTTTGTTGATGGCCGCTTCGATCTGGGACTTGGCACCTTC CGCGGCGGACTGCGCCGCCTCCACTGGGTGATGGGCGTTTGGCTGCTGGA GCATGTCTTCGTCCTGGCGCTCTATTTCGCCTTCCGCGGATGGGCCTTGG TCAGGCACAAACTGAAACCGCACAGTTCTCTCCAGCGCTTTTGGTCGCAC AGCTGTCTCATCCTGTACATCAGCTCCCAGCTGGTCTTCTGTTTCGTGTC GACTTCGCTGTGCCTCAAGTTCAACCTGCCCTTTGTGAGTGCGTGTATCC TGTTGCTCGAGAGCACGCGACTGCTGATGAAGATGCACGCCTTTGTGAGG TACAATGCTGAGCGCGTTCTGAATGGCAAGGCCAAGAAGGAAGATGCGGA GGAGGAGAAAGAAGGCAGTGAGCGACCGTTTGTGCCGCCGCTGAGCTGTT ACACGTACTTTTTGTTTGCACCCACGCTTATCTACCGAGACAGCTACCCG CGCACCTCCCACATCCGCTGGAAGTTTGCCCTGAATCGACTGTTGGAGGT GGTGGCCATAGCCTTCCTGTACGCGTTCATCCATGAGCGGCACATCCACG AGCACTTCGGACAGTACGGACTGGAACCAATGGGACCCTCCCAGCTGATC CTCAAGCTGTTCGGCATGATGCTGCCCAGCGCGGTGATCTTTCTGTGCGG CTTCTACCTAATCCTGCACTCGTGGCTGAACTTCACGTCGGAGCTGCTAC GCTTCGGTGATCGAATGTTCTACAAGGACTGGTGGACGTCGCACACTTAC GATGGCTACTACAGAAACTGGAATGTCGTCGTGCACGACTGGCTGTACGA GTACGTGTACAAGGATATGTACACTCATGTGTTCCGAGGTTCCAAGGTGG CCGCCTCGCTGGCAGTGTTCATGATCTCCGCTGTGGTCCATGAGCAGGTT CTCGGCTTTGCCCTGCAAATGTTCTTCCCAGTGATGTTCTTCTTCTTTGG GGTCGTGGGTGTTGCCTTGGTATTCCTAATGCGGAGTGCTCCAAAAGTGA TGGGCAACATCTTTCTGTGGTTCTCTCTGATCCTGGGAAATGCCACGCTG ATCTCACTATACGCCATGGAGCATTACGCCCTAAAGAACTGCAACCTAAG CAACGAGAGTTGGACGTATCGCCTGCTGCCGGCGGTATGGCGCTGCTACA ATTAGTCAATTAGTTAAACACTACTTTTAAACTGTCTGTACACAGGGCGT ACGCTTCGATTTGTATTTTAGGTAAATAAACTTAATGAAATTAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 4540116..4541233 | 975..2092 | 5545 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 4538887..4539741 | 122..976 | 4260 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 4530392..4530478 | 35..121 | 420 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 8454977..8456096 | 975..2094 | 5585 | 99.9 | Plus |
3R | 31820162 | 3R | 8453749..8454603 | 122..976 | 4275 | 100 | Plus |
3R | 31820162 | 3R | 8445247..8445333 | 35..121 | 435 | 100 | Plus |
3R | 31820162 | 3R | 8441813..8441848 | 1..36 | 180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4526957..4526992 | 1..36 | 100 | -> | Plus |
chr3R | 4530394..4530478 | 37..121 | 98 | -> | Plus |
chr3R | 4538887..4539739 | 122..974 | 99 | -> | Plus |
chr3R | 4540116..4541233 | 975..2092 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8112-RA | 1..1680 | 326..2005 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8112-RA | 1..1680 | 326..2005 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8112-RB | 1..1680 | 326..2005 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8112-RA | 1..1680 | 326..2005 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8112-RB | 1..1680 | 326..2005 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8112-RA | 1..2092 | 1..2092 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8112-RA | 1..2092 | 1..2092 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8112-RB | 1..1956 | 137..2092 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8112-RA | 1..2092 | 1..2092 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8112-RB | 1..1956 | 137..2092 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8700982..8701017 | 1..36 | 100 | -> | Plus |
3R | 8704418..8704502 | 37..121 | 100 | -> | Plus |
3R | 8712918..8713770 | 122..974 | 100 | -> | Plus |
3R | 8714146..8715263 | 975..2092 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8700982..8701017 | 1..36 | 100 | -> | Plus |
3R | 8704418..8704502 | 37..121 | 100 | -> | Plus |
3R | 8712918..8713770 | 122..974 | 100 | -> | Plus |
3R | 8714146..8715263 | 975..2092 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8700982..8701017 | 1..36 | 100 | -> | Plus |
3R | 8704418..8704502 | 37..121 | 100 | -> | Plus |
3R | 8712918..8713770 | 122..974 | 100 | -> | Plus |
3R | 8714146..8715263 | 975..2092 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4526704..4526739 | 1..36 | 100 | -> | Plus |
arm_3R | 4530140..4530224 | 37..121 | 100 | -> | Plus |
arm_3R | 4538640..4539492 | 122..974 | 100 | -> | Plus |
arm_3R | 4539868..4540985 | 975..2092 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8453749..8454601 | 122..974 | 100 | -> | Plus |
3R | 8454977..8456094 | 975..2092 | 99 | Plus | |
3R | 8441813..8441848 | 1..36 | 100 | -> | Plus |
3R | 8445249..8445333 | 37..121 | 100 | -> | Plus |
Translation from 325 to 2004
> RE61294.pep MAAERQEKRGEEETQPRLPDLGFVRDKLQKFQSKMLTDFEQRLSCMVEDV LQDLRQRELRAHEFPNFERSDRKSTWHNRVTSQAPADVSDSTNGHANGTH PRPPIQSETSARKQRRQLPEKVFVARESYLTALLQVEHMRTIYHIFYIIL VMFLLNVICYDYFVDGRFDLGLGTFRGGLRRLHWVMGVWLLEHVFVLALY FAFRGWALVRHKLKPHSSLQRFWSHSCLILYISSQLVFCFVSTSLCLKFN LPFVSACILLLESTRLLMKMHAFVRYNAERVLNGKAKKEDAEEEKEGSER PFVPPLSCYTYFLFAPTLIYRDSYPRTSHIRWKFALNRLLEVVAIAFLYA FIHERHIHEHFGQYGLEPMGPSQLILKLFGMMLPSAVIFLCGFYLILHSW LNFTSELLRFGDRMFYKDWWTSHTYDGYYRNWNVVVHDWLYEYVYKDMYT HVFRGSKVAASLAVFMISAVVHEQVLGFALQMFFPVMFFFFGVVGVALVF LMRSAPKVMGNIFLWFSLILGNATLISLYAMEHYALKNCNLSNESWTYRL LPAVWRCYN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18181-PA | 555 | GF18181-PA | 4..555 | 6..559 | 2427 | 83 | Plus |
Dana\GF15369-PA | 570 | GF15369-PA | 298..542 | 297..529 | 327 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12153-PA | 557 | GG12153-PA | 2..557 | 4..559 | 2736 | 94.4 | Plus |
Dere\GG22776-PA | 611 | GG22776-PA | 347..591 | 291..529 | 333 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18571-PA | 567 | GH18571-PA | 2..567 | 10..559 | 2150 | 73 | Plus |
Dgri\GH13104-PA | 565 | GH13104-PA | 290..544 | 278..529 | 320 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8112-PB | 559 | CG8112-PB | 1..559 | 1..559 | 2986 | 100 | Plus |
CG8112-PD | 222 | CG8112-PD | 1..220 | 1..220 | 1149 | 98.6 | Plus |
CG8112-PC | 218 | CG8112-PC | 1..216 | 1..216 | 1144 | 100 | Plus |
mdy-PE | 565 | CG31991-PE | 297..545 | 281..529 | 350 | 35.8 | Plus |
mdy-PC | 565 | CG31991-PC | 297..545 | 281..529 | 350 | 35.8 | Plus |
mdy-PB | 565 | CG31991-PB | 297..545 | 281..529 | 350 | 35.8 | Plus |
mdy-PA | 565 | CG31991-PA | 297..545 | 281..529 | 350 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24769-PA | 569 | GI24769-PA | 2..569 | 3..559 | 2169 | 70.5 | Plus |
Dmoj\GI14192-PA | 561 | GI14192-PA | 298..542 | 291..529 | 315 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12471-PA | 563 | GL12471-PA | 6..563 | 4..559 | 2434 | 81.6 | Plus |
Dper\GL18793-PA | 558 | GL18793-PA | 317..538 | 311..529 | 318 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20833-PA | 565 | GA20833-PA | 12..565 | 8..559 | 2420 | 81.8 | Plus |
Dpse\GA16599-PA | 558 | GA16599-PA | 317..538 | 311..529 | 318 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23753-PA | 558 | GM23753-PA | 1..558 | 1..559 | 2925 | 97.9 | Plus |
Dsec\GM17212-PA | 607 | GM17212-PA | 339..587 | 281..529 | 339 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18564-PA | 305 | GD18564-PA | 1..302 | 1..302 | 1511 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22674-PA | 574 | GJ22674-PA | 1..574 | 1..559 | 2128 | 73.2 | Plus |
Dvir\GJ17509-PA | 565 | GJ17509-PA | 303..546 | 289..529 | 327 | 34.7 | Plus |
Translation from 325 to 2004
> RE61294.hyp MAAERQEKRGEEETQPRLPDLGFVRDKLQKFQSKMLTDFEQRLSCMVEDV LQDLRQRELRAHEFPNFERSDRKSTWHNRVTSQAPADVSDSTNGHANGTH PRPPIQSETSARKQRRQLPEKVFVARESYLTALLQVEHMRTIYHIFYIIL VMFLLNVICYDYFVDGRFDLGLGTFRGGLRRLHWVMGVWLLEHVFVLALY FAFRGWALVRHKLKPHSSLQRFWSHSCLILYISSQLVFCFVSTSLCLKFN LPFVSACILLLESTRLLMKMHAFVRYNAERVLNGKAKKEDAEEEKEGSER PFVPPLSCYTYFLFAPTLIYRDSYPRTSHIRWKFALNRLLEVVAIAFLYA FIHERHIHEHFGQYGLEPMGPSQLILKLFGMMLPSAVIFLCGFYLILHSW LNFTSELLRFGDRMFYKDWWTSHTYDGYYRNWNVVVHDWLYEYVYKDMYT HVFRGSKVAASLAVFMISAVVHEQVLGFALQMFFPVMFFFFGVVGVALVF LMRSAPKVMGNIFLWFSLILGNATLISLYAMEHYALKNCNLSNESWTYRL LPAVWRCYN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8112-PB | 559 | CG8112-PB | 1..559 | 1..559 | 2986 | 100 | Plus |
CG8112-PD | 222 | CG8112-PD | 1..220 | 1..220 | 1149 | 98.6 | Plus |
CG8112-PC | 218 | CG8112-PC | 1..216 | 1..216 | 1144 | 100 | Plus |
mdy-PE | 565 | CG31991-PE | 297..545 | 281..529 | 350 | 35.8 | Plus |
mdy-PC | 565 | CG31991-PC | 297..545 | 281..529 | 350 | 35.8 | Plus |