BDGP Sequence Production Resources |
Search the DGRC for RE61749
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 617 |
Well: | 49 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14667-RA |
Protein status: | RE61749.pep: wuzgold |
Preliminary Size: | 972 |
Sequenced Size: | 1286 |
Gene | Date | Evidence |
---|---|---|
CG14667 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14667 | 2002-04-26 | Blastp of sequenced clone |
CG14667 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14667 | 2008-04-29 | Release 5.5 accounting |
CG14667 | 2008-08-15 | Release 5.9 accounting |
CG14667 | 2008-12-18 | 5.12 accounting |
CG14667 | 2011-03-01 | Transcript Validation |
1286 bp (1286 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113543
> RE61749.complete AAGTTGATAAACAATGAACCTCGCCGACGTTTGCCGTATTTGCGCCAACA AAATTATGGGCCACCAGCGAGATCGCAACATATTCATTCACATGCGGGGA AAATATTTGGGTCAACTGAAGCTAATCACGGGAGTGGAGCTGACAAGAAA CCAGGGGCTGCCGGAGATTGTTTGCGAGCGCTGCTTCTCCGAGCTGGACC TGGCCACCAAGTTCCGCGAGCGGTGCATCTTCTCGCAAAAGTACCTGCTG GATATCATAAAGAAGACCAGTGATCAAAGCACTGTTCACGTTGAGCTTAG TTCCGAGCCGCTGGACGAGCAACTGATCGATGCGGATCAATTGGAGACGC ACTACGATGACGACCAGTACGTTTGTTATCAAGGCACGAAAGAGGAACAC CAAGACCTAGAGGAAATCGAGCTGGATGACGACCCCTCTGCCGCTGTGAT AGCGGCAGCAGAGGCGGCAGCAGAAGCGGCGCAGCAGGAGGATCTACAGG AGCAGGAAATGGAGCGGGCCGCCAAGAGGCGCAGTAACTTCTTTATCTGC GACGAGTGTGGAACCCTGTTCCACGATGCGTTCCTGTACACCGAGCATTT AAATGGGCACCAGAACCGGCGGGATATGAACCAGTTCTTCCCCTGCCCTG AGTGCCCACAGACTTTTAACAAGAAGGCGCTTCTCAAGCAGCATCGCACC CAGGTTCATTTAATTAACCGCAGGTTCCAGTGCACCATCTGCCACGAGGC TTTCGCGTCTCTGGGCGCTAAGTTGCGGCACGACAAGTAAGGAGGCTGGG AATTGAATGCTAGCGCAGCACTATATGCAACTTCCAATTTCATTTTAGAG CCCATAAGAACGAACGACCTTATCCATGCCTAGAATGCGGAATGATCTTC AGCAGCGTTTCCGAATTGCAGAACCACTTTTCGACACACTCAAAGCAAAT CCGAAAGTTCAGGTGTGAGCCTTGCAACATGGATTTTATAACTCGCCGAG GCTTGGTGGCCCATACAAAAACAGCACCGCATAAGCGCCTTGCCAAATAT ATGCAGGATGAATTCGATTTCATCGAATTGGCAACCTAACCCTCAATTAT TACCACCTTCTTTCTAAGTAAATGCTAAGGTCAAAAAAGTAAATCATAAT TGAGTAGTTCAGTTTACTACTTCGCTACCATAATATTCGACAATGGAGTA TCGGTTCAATGTTATTTTTTTATAAGTGTATTTTTAATTTATTGAAAATA AAATTCCTTCAGTTTTAAAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14667-RA | 1364 | CG14667-RA | 75..1338 | 4..1267 | 6305 | 99.9 | Plus |
CG14667.a | 1357 | CG14667.a | 74..856 | 4..786 | 3915 | 100 | Plus |
CG14667-RB | 1403 | CG14667-RB | 86..868 | 4..786 | 3915 | 100 | Plus |
CG14667-RB | 1403 | CG14667-RB | 869..1287 | 849..1267 | 2080 | 99.7 | Plus |
CG14667.a | 1357 | CG14667.a | 1021..1331 | 957..1267 | 1525 | 99.3 | Plus |
CG14667.a | 1357 | CG14667.a | 857..972 | 849..964 | 580 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1200935..1201761 | 138..964 | 4135 | 100 | Plus |
chr3R | 27901430 | chr3R | 1201810..1202120 | 957..1267 | 1525 | 99.4 | Plus |
chr3R | 27901430 | chr3R | 1200740..1200875 | 4..139 | 680 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
hopper | 1435 | hopper DMTRDNA 1435bp Derived from X80025 (g510507) (Rel. 44, Last updated, Version 11). | 168..220 | 1205..1258 | 132 | 74.1 | Plus |
McClintock | 6450 | McClintock McCLINTOCK 6450bp | 1094..1151 | 1266..1205 | 129 | 72.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1201816..1202061 | 963..1208 | 99 | <- | Plus |
chr3R | 1200937..1201247 | 140..450 | 100 | == | Plus |
chr3R | 1200737..1200875 | 1..139 | 99 | -> | Plus |
chr3R | 1201303..1201759 | 506..962 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14667-RA | 1..777 | 14..790 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14667-RA | 1..777 | 14..790 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14667-RA | 1..777 | 14..790 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14667-RA | 1..777 | 14..790 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14667-RB | 1..773 | 14..786 | 100 | == | Plus |
CG14667-RB | 774..1014 | 849..1089 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14667-RA | 9..1275 | 1..1267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14667-RA | 9..1275 | 1..1267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14667-RA | 9..1275 | 1..1267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14667-RA | 9..1275 | 1..1267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14667-RB | 57..842 | 1..786 | 99 | == | Plus |
CG14667-RB | 843..1260 | 849..1266 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5375078..5375216 | 1..139 | 99 | -> | Plus |
3R | 5375278..5376100 | 140..962 | 100 | -> | Plus |
3R | 5376157..5376461 | 963..1270 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5375078..5375216 | 1..139 | 99 | -> | Plus |
3R | 5375278..5376100 | 140..962 | 100 | -> | Plus |
3R | 5376157..5376461 | 963..1270 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5375078..5375216 | 1..139 | 99 | -> | Plus |
3R | 5375278..5376100 | 140..962 | 100 | -> | Plus |
3R | 5376157..5376461 | 963..1270 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1200800..1200938 | 1..139 | 99 | -> | Plus |
arm_3R | 1201000..1201822 | 140..962 | 100 | -> | Plus |
arm_3R | 1201879..1202183 | 963..1270 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5116109..5116931 | 140..962 | 100 | -> | Plus |
3R | 5116988..5117292 | 963..1270 | 98 | Plus | |
3R | 5115909..5116047 | 1..139 | 99 | -> | Plus |
Translation from 13 to 789
> RE61749.pep MNLADVCRICANKIMGHQRDRNIFIHMRGKYLGQLKLITGVELTRNQGLP EIVCERCFSELDLATKFRERCIFSQKYLLDIIKKTSDQSTVHVELSSEPL DEQLIDADQLETHYDDDQYVCYQGTKEEHQDLEEIELDDDPSAAVIAAAE AAAEAAQQEDLQEQEMERAAKRRSNFFICDECGTLFHDAFLYTEHLNGHQ NRRDMNQFFPCPECPQTFNKKALLKQHRTQVHLINRRFQCTICHEAFASL GAKLRHDK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17249-PA | 320 | GF17249-PA | 1..242 | 1..258 | 594 | 53.9 | Plus |
Dana\GF22028-PA | 370 | GF22028-PA | 6..202 | 7..240 | 187 | 27 | Plus |
Dana\GF18185-PA | 317 | GF18185-PA | 2..250 | 3..258 | 185 | 26.6 | Plus |
Dana\GF18255-PA | 627 | GF18255-PA | 183..477 | 7..257 | 181 | 23 | Plus |
Dana\GF18186-PA | 409 | GF18186-PA | 4..277 | 5..258 | 176 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12782-PA | 334 | GG12782-PA | 1..253 | 1..258 | 1032 | 75.2 | Plus |
Dere\GG12737-PA | 394 | GG12737-PA | 2..268 | 3..258 | 200 | 24.7 | Plus |
Dere\GG18034-PA | 334 | GG18034-PA | 4..264 | 3..258 | 169 | 24.4 | Plus |
Dere\GG17430-PA | 347 | GG17430-PA | 3..271 | 4..258 | 159 | 22.1 | Plus |
Dere\GG17429-PA | 418 | GG17429-PA | 8..327 | 2..258 | 158 | 22.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17845-PA | 350 | GH17845-PA | 7..265 | 2..257 | 443 | 41.1 | Plus |
Dgri\GH18577-PA | 386 | GH18577-PA | 2..276 | 3..258 | 174 | 24.6 | Plus |
Dgri\GH22380-PA | 579 | GH22380-PA | 186..442 | 5..255 | 170 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14667-PB | 337 | CG14667-PB | 1..258 | 1..258 | 1372 | 100 | Plus |
CG8159-PB | 399 | CG8159-PB | 2..268 | 3..258 | 224 | 24.9 | Plus |
M1BP-PA | 418 | CG9797-PA | 8..327 | 2..258 | 210 | 23.3 | Plus |
ranshi-PA | 346 | CG9793-PA | 5..272 | 6..258 | 198 | 23.7 | Plus |
CG31441-PA | 341 | CG31441-PA | 4..271 | 3..258 | 191 | 22.5 | Plus |
ouib-PA | 312 | CG11762-PA | 5..243 | 6..258 | 187 | 25.1 | Plus |
CG6813-PD | 256 | CG6813-PD | 6..220 | 7..258 | 184 | 24.6 | Plus |
CG6813-PB | 256 | CG6813-PB | 6..220 | 7..258 | 184 | 24.6 | Plus |
CG6813-PC | 294 | CG6813-PC | 6..220 | 7..258 | 184 | 24.6 | Plus |
CG1792-PA | 372 | CG1792-PA | 6..272 | 7..258 | 182 | 24.2 | Plus |
Odj-PA | 430 | CG7357-PA | 5..283 | 7..258 | 181 | 24.1 | Plus |
CG4854-PA | 319 | CG4854-PA | 12..254 | 7..258 | 149 | 20.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22549-PA | 338 | GI22549-PA | 3..256 | 2..258 | 511 | 45.9 | Plus |
Dmoj\GI22394-PA | 371 | GI22394-PA | 2..269 | 3..258 | 193 | 25.4 | Plus |
Dmoj\GI22393-PA | 359 | GI22393-PA | 2..281 | 3..258 | 172 | 24.4 | Plus |
Dmoj\GI23401-PA | 372 | GI23401-PA | 1..288 | 3..258 | 152 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21642-PA | 328 | GL21642-PA | 1..247 | 1..258 | 647 | 51.5 | Plus |
Dper\GL21707-PA | 294 | GL21707-PA | 5..209 | 6..258 | 206 | 27.3 | Plus |
Dper\GL12478-PA | 401 | GL12478-PA | 2..269 | 3..258 | 205 | 25.6 | Plus |
Dper\GL12613-PA | 364 | GL12613-PA | 5..271 | 7..258 | 196 | 24.4 | Plus |
Dper\GL12476-PA | 333 | GL12476-PA | 2..260 | 3..258 | 189 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26357-PB | 247 | GA26357-PB | 1..247 | 1..258 | 651 | 52.5 | Plus |
Dpse\GA26357-PA | 328 | GA26357-PA | 1..247 | 1..258 | 650 | 52.5 | Plus |
Dpse\GA19878-PB | 294 | GA19878-PB | 5..209 | 6..258 | 209 | 26.1 | Plus |
Dpse\GA19878-PA | 251 | GA19878-PA | 5..207 | 6..256 | 208 | 26.3 | Plus |
Dpse\GA20857-PA | 401 | GA20857-PA | 2..269 | 3..258 | 206 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10804-PA | 339 | GM10804-PA | 1..258 | 1..258 | 1145 | 88 | Plus |
Dsec\GM23759-PA | 399 | GM23759-PA | 2..268 | 3..258 | 204 | 25.5 | Plus |
Dsec\GM26088-PA | 256 | GM26088-PA | 6..215 | 7..253 | 183 | 24.7 | Plus |
Dsec\GM26322-PA | 346 | GM26322-PA | 1..267 | 6..258 | 162 | 24.8 | Plus |
Dsec\GM15334-PA | 321 | GM15334-PA | 10..246 | 7..258 | 159 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19784-PA | 339 | GD19784-PA | 1..258 | 1..258 | 1150 | 88.8 | Plus |
Dsim\GD18570-PA | 399 | GD18570-PA | 2..268 | 3..258 | 203 | 24.5 | Plus |
Dsim\GD20849-PA | 397 | GD20849-PA | 52..318 | 6..258 | 178 | 26.3 | Plus |
Dsim\GD18569-PA | 312 | GD18569-PA | 2..243 | 3..258 | 163 | 23.9 | Plus |
Dsim\GD20207-PA | 427 | GD20207-PA | 1..280 | 3..258 | 150 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11107-PA | 344 | GJ11107-PA | 7..263 | 2..258 | 519 | 43.7 | Plus |
Dvir\GJ22679-PA | 375 | GJ22679-PA | 2..277 | 3..258 | 228 | 25.8 | Plus |
Dvir\GJ10170-PA | 332 | GJ10170-PA | 8..245 | 1..258 | 158 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11848-PA | 340 | GK11848-PA | 1..262 | 1..258 | 473 | 44.2 | Plus |
Dwil\GK11276-PA | 396 | GK11276-PA | 2..299 | 3..258 | 164 | 22.7 | Plus |
Dwil\GK13271-PA | 363 | GK13271-PA | 1..287 | 3..258 | 163 | 22.6 | Plus |
Dwil\GK12137-PA | 319 | GK12137-PA | 1..237 | 3..258 | 162 | 25.3 | Plus |
Dwil\GK14008-PA | 675 | GK14008-PA | 204..487 | 7..258 | 162 | 21.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25465-PA | 336 | GE25465-PA | 1..255 | 1..258 | 957 | 73.4 | Plus |
Dyak\GE25903-PA | 398 | GE25903-PA | 2..268 | 3..258 | 195 | 24.6 | Plus |
Dyak\GE25902-PA | 306 | GE25902-PA | 2..232 | 3..258 | 172 | 24.6 | Plus |
Dyak\GE24830-PA | 418 | GE24830-PA | 8..327 | 2..258 | 164 | 22.7 | Plus |
Dyak\GE25242-PA | 436 | GE25242-PA | 5..290 | 7..258 | 162 | 23.1 | Plus |
Translation from 13 to 789
> RE61749.hyp MNLADVCRICANKIMGHQRDRNIFIHMRGKYLGQLKLITGVELTRNQGLP EIVCERCFSELDLATKFRERCIFSQKYLLDIIKKTSDQSTVHVELSSEPL DEQLIDADQLETHYDDDQYVCYQGTKEEHQDLEEIELDDDPSAAVIAAAE AAAEAAQQEDLQEQEMERAAKRRSNFFICDECGTLFHDAFLYTEHLNGHQ NRRDMNQFFPCPECPQTFNKKALLKQHRTQVHLINRRFQCTICHEAFASL GAKLRHDK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14667-PB | 337 | CG14667-PB | 1..258 | 1..258 | 1372 | 100 | Plus |
CG8159-PB | 399 | CG8159-PB | 2..268 | 3..258 | 224 | 24.9 | Plus |
M1BP-PA | 418 | CG9797-PA | 8..327 | 2..258 | 210 | 23.3 | Plus |
ranshi-PA | 346 | CG9793-PA | 5..272 | 6..258 | 198 | 23.7 | Plus |
CG11762-PA | 312 | CG11762-PA | 5..243 | 6..258 | 187 | 25.1 | Plus |