BDGP Sequence Production Resources |
Search the DGRC for RE61993
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 619 |
Well: | 93 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11134-RA |
Protein status: | RE61993.pep: gold |
Preliminary Size: | 796 |
Sequenced Size: | 913 |
Gene | Date | Evidence |
---|---|---|
CG11134 | 2001-12-16 | Blastp of sequenced clone |
CG11134 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11134 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11134 | 2008-04-29 | Release 5.5 accounting |
CG11134 | 2008-08-15 | Release 5.9 accounting |
CG11134 | 2008-12-18 | 5.12 accounting |
913 bp (913 high quality bases) assembled on 2001-12-16
GenBank Submission: AY071553
> RE61993.complete ATTGTTTACATTCGTGATTTGTCGCTTTCAGAATCCCTTTATCTCCCGTT ATCAGTGTCGCACGGCGACGAAGATTACGTCCCACGAAAGTCACATTGTC AGCGAGATGGCCCTCTCGATCTTCAAAGACTTGCCGGCGGAGCATCCTCG CCACTTGATTCCCTCGCTATGCAGGCAATTCTATCATTTGGGATGGGTGA CCGGCACAGGAGGTGGCATGAGCATTAAGTACAACGATGAGATCTACATA GCACCGTCGGGCGTCCAGAAGGAGCGAATGCAGCCGGAGGATCTCTTCGT GCAGGATATAACCGGCAAGGATCTGCAACTGCCGCCTGAGATCAAGGGCC TGAAGAAGAGCCAATGTACGCCGCTCTTTATGCTGGCCTATCAGCATCGG CAGGCGGGAGCCGTCATCCACACCCATTCGCAGCACGCCGTAATGGCCAC GCTCCTGTGGCCAGGGAAAACCTTCCGCTGCACCCACTTGGAGATGATCA AGGGCGTCTACGATGAGGCGGACAAGCGATATTTGCGCTACGACGAGGAG CTCGTCGTACCGATCATCGAGAACACACCCTTTGAACGCGACCTGGCCGA CAGTATGTACGCCGCCATGATGGAGTATCCGGGCTGCAGTGCGATCCTGG TTCGACGACACGGCGTCTACGTTTGGGGACAGAACTGGGAGAAGGCCAAA ACCATGTCGGAATGCTATGACTATCTCTTCTCCATTGCCGTGGAAATGAA GAAGGCCGGAATCGATCCGGAAAAGTTCGAGAGCTCATAAGGAAGTGAAG CTGATACGAACGCACATTCTACTTGTCGTTTAACCCTATAAATTGATGCA TTTACTAACTGAAATCCATTGGTCAATGCAAAATAATAGTACTGAATAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11134-RA | 1081 | CG11134-RA | 131..1029 | 1..899 | 4495 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13629169..13629641 | 235..707 | 2350 | 99.8 | Plus |
chrX | 22417052 | chrX | 13628872..13629105 | 1..234 | 1170 | 100 | Plus |
chrX | 22417052 | chrX | 13629709..13629906 | 700..897 | 975 | 99.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13628872..13629105 | 1..234 | 100 | -> | Plus |
chrX | 13629169..13629639 | 235..705 | 99 | -> | Plus |
chrX | 13629715..13629906 | 706..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11134-RA | 1..684 | 107..790 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11134-RA | 1..684 | 107..790 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11134-RA | 1..684 | 107..790 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11134-RA | 1..684 | 107..790 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11134-RA | 1..684 | 107..790 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11134-RA | 1..897 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11134-RA | 1..897 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11134-RA | 5..901 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11134-RA | 1..897 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11134-RA | 5..901 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13738143..13738376 | 1..234 | 100 | -> | Plus |
X | 13738440..13738910 | 235..705 | 100 | -> | Plus |
X | 13738986..13739177 | 706..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13738143..13738376 | 1..234 | 100 | -> | Plus |
X | 13738440..13738910 | 235..705 | 100 | -> | Plus |
X | 13738986..13739177 | 706..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13738143..13738376 | 1..234 | 100 | -> | Plus |
X | 13738440..13738910 | 235..705 | 100 | -> | Plus |
X | 13738986..13739177 | 706..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13632176..13632409 | 1..234 | 100 | -> | Plus |
arm_X | 13632473..13632943 | 235..705 | 100 | -> | Plus |
arm_X | 13633019..13633210 | 706..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13746241..13746474 | 1..234 | 100 | -> | Plus |
X | 13746538..13747008 | 235..705 | 100 | -> | Plus |
X | 13747084..13747275 | 706..897 | 100 | Plus |
Translation from 0 to 789
> RE61993.hyp LFTFVICRFQNPFISRYQCRTATKITSHESHIVSEMALSIFKDLPAEHPR HLIPSLCRQFYHLGWVTGTGGGMSIKYNDEIYIAPSGVQKERMQPEDLFV QDITGKDLQLPPEIKGLKKSQCTPLFMLAYQHRQAGAVIHTHSQHAVMAT LLWPGKTFRCTHLEMIKGVYDEADKRYLRYDEELVVPIIENTPFERDLAD SMYAAMMEYPGCSAILVRRHGVYVWGQNWEKAKTMSECYDYLFSIAVEMK KAGIDPEKFESS*
Translation from 106 to 789
> RE61993.pep MALSIFKDLPAEHPRHLIPSLCRQFYHLGWVTGTGGGMSIKYNDEIYIAP SGVQKERMQPEDLFVQDITGKDLQLPPEIKGLKKSQCTPLFMLAYQHRQA GAVIHTHSQHAVMATLLWPGKTFRCTHLEMIKGVYDEADKRYLRYDEELV VPIIENTPFERDLADSMYAAMMEYPGCSAILVRRHGVYVWGQNWEKAKTM SECYDYLFSIAVEMKKAGIDPEKFESS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22600-PA | 227 | GF22600-PA | 1..227 | 1..227 | 1199 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17808-PA | 227 | GG17808-PA | 1..227 | 1..227 | 1229 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11851-PA | 230 | GH11851-PA | 1..225 | 1..225 | 1127 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11134-PB | 227 | CG11134-PB | 1..227 | 1..227 | 1221 | 100 | Plus |
CG11134-PA | 227 | CG11134-PA | 1..227 | 1..227 | 1221 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14333-PA | 227 | GI14333-PA | 1..227 | 1..227 | 1143 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19864-PA | 216 | GL19864-PA | 1..210 | 1..224 | 915 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10783-PA | 230 | GA10783-PA | 1..227 | 1..227 | 1111 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17635-PA | 227 | GM17635-PA | 1..227 | 1..227 | 1232 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17142-PA | 227 | GD17142-PA | 1..227 | 1..227 | 1232 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19387-PA | 230 | GJ19387-PA | 1..227 | 1..227 | 1170 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25216-PA | 228 | GK25216-PA | 1..227 | 1..227 | 1149 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17104-PA | 227 | GE17104-PA | 1..226 | 1..226 | 1218 | 99.1 | Plus |