Clone RE62235 Report

Search the DGRC for RE62235

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:622
Well:35
Vector:pFlc-1
Associated Gene/Transcriptsl-RA
Protein status:RE62235.pep: gold
Sequenced Size:5690

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4200 2003-01-01 Sim4 clustering to Release 3
sl 2008-04-29 Release 5.5 accounting
sl 2008-08-15 Release 5.9 accounting
sl 2008-12-18 5.12 accounting

Clone Sequence Records

RE62235.complete Sequence

5690 bp (5690 high quality bases) assembled on 2005-10-06

GenBank Submission: BT023880

> RE62235.complete
CGATCTGCTTCTGTGGTATTTTTTGGGTACAATTCGGATATTGCATTGTT
AATCTCGGTTTATTGAGTCCCAGTGGCCGTGATTTGTGCATCGACCAGTT
GGAAGAGAGGGAGCAGTTGATCTGCGAATAGTTCCACGCGCTGGCACCCA
TAGTTTGTATGCATTGCACTTAGTCTGGCGATCGGTTGGCGAGGCGAGAA
ACAACCTGTGGCAGCCAGCGGATGAGAACTGGATTCGATAGGAATCGACA
CGTTTGGACCGGACAGGATGAGCTGCTTTAGTGCGATGAGTGCCCCGCTG
CTGGGCGAGATGGAGCAGACCATTGGTATGCTGGAGCGCGGCACCATCGT
GACCAAGTTGTATGGGAAACAGCGTCGTCCGGATCGCCGCCACCTGATGC
TCATACGAGAGACACGACAGCTGCTCTGGGCAACGGTGGCCACACAAACG
CCACGCACCGACTACGAGGGCGCCATACAGCTGCGGGAGATTCGCGAGAT
ACGGGTGGGCAAGCACTCGAAGGAGTTTCGCCTGTTTGCCGACGACTGTC
AGCGCTTCGAGTCCAGCAAGTGCTTTGTCATACTGCACGGCAATCACTTC
AAGCTGAAGAGCTTCTCGGTGGTGGCTCTGTCGGAGATCGAGGCCGACAA
TTGGGTGCGGGGATTGCGTTACATGGTTAAGGACACACTGGGAGCACCCT
ATCCCTTGCAAATTGATCGCTGGCTGCGTCGCGAGTACTATCAAATCGAG
AATGTTAACACGCATTCCGCCAAGGCCACGGAACAGTCGCCAGCCCAGGT
GACCATTAAGGACTTTAAGCTCTTTTTGGCCGGAGTTAGCTGTAAGATGA
CCACCGGCAAGTTCATGGAGCACTTTACCGAGGATGTGCGGCGCAAGCAC
GATCTCAAGTTTGATGATTTCTCGCGGCTATATCAGAAGTTGCTGCTGCC
CAACGGATTTGCCAGCGTCTTGTCCGGATCGGGAGTGGCCAACTTTCCCT
ATTCGGAGGACCAACAGGTGGTGCGACCGGCGGAGCTGAAGCAGTTCCTC
GAGACGGAACAGCGCGATGTGAGCGCCAGTGAGATCAGTAGCGCAGCCAT
TGCCTCCTTCATTCGGGACTTTGTTCAGGACGTGGAACGTGATGTTCAGG
AGCCGTATCTCACCTTCCCGGAGTTCGTCGACTTTCTGTTCTCCAAGCAA
AACGACCTGTGGAACAGCAAGTACGACCAAGTGTTCATGGACATGAACCT
GCCGTTGTCCTCCTACTGGATCGCATCGTCGCACAATACCTACCTGACGG
GCGATCAGTTCTCCAGTGAATCCTCCTGCGAGGCCTACGCCCGCGCTCTT
CGCATGGGCTGCCGTTGCATCGAGTTGGATTGTTGGAACGGGCCCGACAA
TCTGCCCTACATATTTCACGGCCACACCATTACCTCCAAGATCAAGTTCA
TGGATGTCATCAAGACGATTAAGGATCATGCGTTCACCAGTTCCGAGTAT
CCGGTAATATTGTCCATAGAGCAGAATTGCTCCCTGGAACAGCAGCGGAA
TATGGCGCAGGCCTTGATCGAGGTTTTCGGGGATATGCTGCTTACGCAAC
CTTGTGATCGAAACGAGCAGCACTTGCCATCGCCATACCAGTTGCGTCGC
AAGATAATCCTGAAGCACAAGAAGTTGCCGCAGTTTGACGACATCGCGAA
TGGGATTTCTAGCACGGGTTCACTGGGCCATAGATCATCGTTGGGCGGAG
CGGGCGGTGGAGCGCATGGGGAGAACGATGGCGAGAATGTGCGCAAGGTG
TTCAAGGAGGGACTGCTCTACTTCAAGGATCCGGTCGATAAGTCCTGGAA
TCTTTATCAGTTCGTTCTGACCCATCAGGAGCTAATCTACTCCTCTGAGA
TCAACGAGTCACGCAACGGAAACTCCGAGGATGATGACTTTGGGCTTTCT
TCGTCGTGCTCCCTAAACAGCAATATGCAGCAAAAGCAAAAGGATACCTC
GGCCAACGATGAGCTGCACTTCGGCGAGAATTGGTTCCATGGGAAACTTG
AAGGTGGCAGAAAGGAGGCTGATGATCTACTAAAGAAGTACAAACACTTT
GGCGATGGTACATTTTTGGTTCGGGAATCGGCCACGTTTGTGGGAGACTA
TAGCCTTTCGTTCTGGCGACGTAATCGCCCGAATCATTGCCGCATCAAGT
TAAAGCATGAAAATGGATCGATCAAGTACTATCTAGTGGAGAATTTTGTA
TTCGATTCACTGTACTCACTGATCGTTTATTATCGCAAGAATATGCTGCG
TAGCTCAGAGTTTTCGATTATACTGAAAGAGCCAGTTCCGCAGCCGAAAA
AGCACGAGGATCAGGAGTGGTTCCATCCGAACACCACCAAGGAGCAGGCC
GAACAGGGTCTATACCGGCTGGAAATTGGTTCGTTTCTAGTGCGGCCATC
GGTGCAGAGCATTAACGCTTTTGTCATTTCGTTCACAATCAATCGAAAGA
TCAAGCACTGTCGCATTATGCAGGAGGGACGCTTGTACGGCATCGATACA
ATGAACTTCGAGTCTCTGGTCTCGCTGATCAACTATTATACCCGAAATCC
ACTCTATCGCAATGTTAAGCTCAGCCATCCGGTGTCGCAGGAGCTGCTGC
GTCAGGCGCTAGCGGAGGCGGCACAGGGTGATCATAGTGGCGGTCACGAT
GACAACGGTGCCTCCAACTACATGGGCTCCAATCTGGAGGAGAATGTCAC
GTGCAAGGCGCTCTACAGCTATAAGGCGAACAAGCCAGACGAACTCTCTT
TTCCCAAGCATGCCATCATAACGAATGTCCAGAGGGACAACTCGATGTGG
TGGATTGGAGATTATGGTGGCATGATCAAGAAGCATCTGCCGGCAAACTA
CGTTAAGGTTATCGATTCAACTACCGAGGACTACAATTCGCTGAACGAAG
AGGGCACGGATGGACGCACCGATTCCATTGAGATTTTCGGAGCTGTTGCC
TCGCTCTTTGAGTCCAACGATCCGGGGATTATTTTCAAGCTGCAGATACA
AACGCCAACGATGCAGAATCCGTTTGTGATTGGCTTCGACAATCAGGAGA
CGGCGTACGAGTGGATAAAGGCAATCCAGGAGGCAGCCCTTATCGCCAGT
CAGCTGGCATCGGAGAGGCGGAAAAAGGAGCGCACTGCCCGGGTGGCCAA
GGAGATGTCCGATCTGATTATCTACTTCCGCAGCGTGCCGTTCCGCGAGC
ACTCGTGGATATTTCAGGAAATGTCGAGTTTCCCCGAAACGAAGGCCGAA
AAGCAGTTCTTCCAGCAGAACACACAACTGTTTCTCTCCTACCATCGCAA
TCAGATTAGCCGAGTGTATCCGAAGGGTCAGCGCCTGGACTCGTCGAATT
TTAATCCCATGCCATTCTGGAATGTTGGATCCCAGATGATCGCACTGAAC
TATCAGACAGGCGATAAGGCCATGCAGCTGAATCAGGCCAAGTTTCGGAA
TAATGGACAATGTGGCTATATCTTAAAGCCATCGTTCATGAAATCTGACA
GCTTCAATCCGAACAATCCGCTGTGCGATGGCCTAAGCGAAGTTAAAGTT
AGCATACGTCTGATAGCCGCACGTCATCTATTCCGGGGCGGCAAATCGAA
CAATCCGCAGATCGTGGTCGAATTGATTGGCGCTAGCTTTGATACGGGCG
TTAAGTATCGCACCAAAGTCAATGAAAATGGTTTCAATCCGGTGTGGAAT
GAATCGTGCGAGTTTAACGTGCGTAATCCACAGTTTGCGATCCTTCGCTT
CGAAGTGCAGGACGAGGATATGTTCGCCGAGACGCACTTCATCGCCCAGG
CGTGCTATCCGCTGACCTGCATTCGCCAGGGCTATCGCAGCGTCATCCTA
CGAAATAAGTTCAGCGAGGAGCTGGAATTATCGTCCCTGCTGATCAACAT
TAAGATAGCAAATGTTACCGCACCGTAAGAGGATTGCTGAGTTAGCTGGA
TCAATATCAATGATTCCAAATCGAGTGTTTGCGAAAACAATTGCGCTAGA
TCAAAAGGAAAGCGAACTTAATTCGCAAAAGCAATTTATCAACAACTTGT
ACATAAGAACATTTCATCGAACTATGAACCTGATTCTCTCACTTGTAATT
TGTCTAAAAAGCTTAGGATCTGAAACGTATGATTTAGATTTAGATTACTT
TCTATACACATCAGCAGTTATGGTTAGTTCATACTATACAATGAGTATTC
AAATGGTAACAATGAATTCTGAACTCCTGGAACTGAAATCAAGTTTATGT
AATCCGTATAATTTGTACACTTTTCCATAACACTAAGCATTCAAGTCTGT
TGTCCTCTAAATGTTGTATTTGTGCGTGAGATTGATTCAGGAGAATAGAA
TGCTACGAATATGTTTTAACTATTCGTCACCTCATTATAAGCATAAGCAA
ACCAGATTTGATTTGATTTCGATTTAGGGAACTTGAGCTATTTCCATTTT
ACCAGTTTTACCATCAAAAGTTAAGTACATTAAGTTGATTCCAAAATTAG
AAATAGAAACAATTCATAAACAGCTCAATTGGCATCAATTTAATGGGCAT
TTGATATTCAGTTTCAGGATCAGCTTTTCATAAGTATTATATTACAATCT
TCTTAAAGACTTTTAACTGAAGAAAATAGACCACTTTCATATGTTATCTG
GAAAACTATTTTAGACCTTTCTCTTAGCACAAATACTCAAACAGCATTTC
AATCATTTAGCATTTACCTTTTTTATTTTCTCTTTTAAAGCTTAAAGTAA
TAATACAATTTATAAAAAAAAAAGGGCAAAGGAAATTTAAACCACTTTGA
TTACATATGTCTTCCAGTTGTTTAACAATTACGATATACCACATAATTGT
GTCTATGTTATTTAACCACGATTGTTGTAGCTAATGTTACAAAAACTAAA
AGTTTGCAAACAATATTAAAATAAAATGTAATTATTCAATTACATTTAAA
TGAACGTGCCTTAAAATTCGAAATGATCGAAATTTTAAATGTTTGAACGT
TAACTATTGAAGTACACCTGTTGCTAAAATAACAAATATTTGAAAAATAA
TAATATAGCTCAAAGATATCTATTTTTTATAAAATCAAAGTTCTAACTTA
GCTTCTTCTCTAAACTGCGAAATCTAAATATCTAAAGCCTAAGTTCAATA
GACGTATTATTACTAAATGCATTATATAATTTATATATCTAGATATTCAT
AAAATGCACTAGTCGATTTAAGAAGTGGAAATTGTGCTCCCTATGCGAAT
CATTTAGGATTTTAATCTGAAACTATTTGCATTCCATACGAATGCCCCAC
TGAAACGATCGATATCATTTGTCTTGCACTCGCATTTAATTATTTAACAA
ACATTCTGCTGTTTCCATTCGCACAATAGTTCTAATTTGGACATTTTGCG
CGTTTGAGCGCATTAGCAAATCATGCTTAGTATATATGTATGTGTATATG
TACCCAAAATGTATTTCATTTGTACGTTCCGTTTTTAAGTGATTTGTATC
TGTACGTCTAATAGATATTTTCAACTGTTTTTGTAATTGCCTTATAATTC
AGTAAACACACACCATACGTATACATTCATAATTATTTAATGCCAAATAA
ATGTTTATCCGGCGTTAGCTGTCTAAAAAAAAAAAAAAAA

RE62235.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:49:57
Subject Length Description Subject Range Query Range Score Percent Strand
sl-RA 5791 sl-RA 115..5787 3..5675 28350 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:04:21
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 16243435..16246203 2906..5674 13800 99.9 Plus
chrX 22417052 chrX 16240050..16241621 3..1574 7785 99.7 Plus
chrX 22417052 chrX 16242514..16243371 2052..2909 4290 100 Plus
chrX 22417052 chrX 16241968..16242453 1571..2056 2430 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:08:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:04:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16353714..16356483 2906..5675 13835 100 Plus
X 23542271 X 16350321..16351892 3..1574 7860 100 Plus
X 23542271 X 16352793..16353650 2052..2909 4290 100 Plus
X 23542271 X 16352247..16352732 1571..2056 2430 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:09:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 16361812..16364581 2906..5675 13835 99.9 Plus
X 23527363 X 16358419..16359990 3..1574 7860 100 Plus
X 23527363 X 16360891..16361748 2052..2909 4290 100 Plus
X 23527363 X 16360345..16360830 1571..2056 2430 100 Plus
Blast to na_te.dros performed 2019-03-16 16:04:19
Subject Length Description Subject Range Query Range Score Percent Strand
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 1040..1232 5130..4932 159 56.8 Minus
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 679..822 5602..5453 158 60 Minus
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 828..1018 4812..5004 149 57.4 Plus
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 1034..1249 5161..4947 139 55.9 Minus
1360 3409 1360 1360 3409bp 1144..1396 5184..4937 134 55.8 Minus
roo 9092 roo DM_ROO 9092bp 1200..1255 5527..5474 130 75 Minus
Stalker2 7672 Stalker2 STALKER2 7672bp 5270..5359 5063..5153 129 63.4 Plus
F-element 4708 F-element F 4708bp 4569..4693 5075..5202 129 57 Plus
McClintock 6450 McClintock McCLINTOCK 6450bp 713..873 4823..4661 123 59.3 Minus
Idefix 7411 Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). 1496..1575 4772..4851 120 65.9 Plus

RE62235.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:05:10 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 16240047..16241619 1..1572 99 -> Plus
chrX 16241970..16242450 1573..2053 100 -> Plus
chrX 16242516..16243369 2054..2907 100 -> Plus
chrX 16243437..16246203 2908..5674 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:28:55 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
sl-RA 1..3711 268..3978 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:45:17 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
sl-RA 1..3711 268..3978 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:10:15 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
sl-RA 1..3711 268..3978 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:26:14 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
sl-RA 1..3711 268..3978 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:56:19 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
sl-RA 1..3711 268..3978 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:53:54 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
sl-RA 10..5684 1..5674 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:45:17 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
sl-RA 10..5684 1..5674 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:10:15 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
sl-RA 4..5678 1..5674 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:26:14 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
sl-RA 10..5684 1..5674 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:56:19 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
sl-RA 4..5678 1..5674 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:05:10 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
X 16350318..16351890 1..1572 99 -> Plus
X 16352249..16352729 1573..2053 100 -> Plus
X 16352795..16353648 2054..2907 100 -> Plus
X 16353716..16356482 2908..5674 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:05:10 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
X 16350318..16351890 1..1572 99 -> Plus
X 16352249..16352729 1573..2053 100 -> Plus
X 16352795..16353648 2054..2907 100 -> Plus
X 16353716..16356482 2908..5674 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:05:10 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
X 16350318..16351890 1..1572 99 -> Plus
X 16352249..16352729 1573..2053 100 -> Plus
X 16352795..16353648 2054..2907 100 -> Plus
X 16353716..16356482 2908..5674 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:10:15 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16244351..16245923 1..1572 99 -> Plus
arm_X 16246282..16246762 1573..2053 100 -> Plus
arm_X 16246828..16247681 2054..2907 100 -> Plus
arm_X 16247749..16250515 2908..5674 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:59:12 Download gff for RE62235.complete
Subject Subject Range Query Range Percent Splice Strand
X 16358416..16359988 1..1572 99 -> Plus
X 16360347..16360827 1573..2053 100 -> Plus
X 16360893..16361746 2054..2907 100 -> Plus
X 16361814..16364580 2908..5674 99   Plus

RE62235.pep Sequence

Translation from 267 to 3977

> RE62235.pep
MSCFSAMSAPLLGEMEQTIGMLERGTIVTKLYGKQRRPDRRHLMLIRETR
QLLWATVATQTPRTDYEGAIQLREIREIRVGKHSKEFRLFADDCQRFESS
KCFVILHGNHFKLKSFSVVALSEIEADNWVRGLRYMVKDTLGAPYPLQID
RWLRREYYQIENVNTHSAKATEQSPAQVTIKDFKLFLAGVSCKMTTGKFM
EHFTEDVRRKHDLKFDDFSRLYQKLLLPNGFASVLSGSGVANFPYSEDQQ
VVRPAELKQFLETEQRDVSASEISSAAIASFIRDFVQDVERDVQEPYLTF
PEFVDFLFSKQNDLWNSKYDQVFMDMNLPLSSYWIASSHNTYLTGDQFSS
ESSCEAYARALRMGCRCIELDCWNGPDNLPYIFHGHTITSKIKFMDVIKT
IKDHAFTSSEYPVILSIEQNCSLEQQRNMAQALIEVFGDMLLTQPCDRNE
QHLPSPYQLRRKIILKHKKLPQFDDIANGISSTGSLGHRSSLGGAGGGAH
GENDGENVRKVFKEGLLYFKDPVDKSWNLYQFVLTHQELIYSSEINESRN
GNSEDDDFGLSSSCSLNSNMQQKQKDTSANDELHFGENWFHGKLEGGRKE
ADDLLKKYKHFGDGTFLVRESATFVGDYSLSFWRRNRPNHCRIKLKHENG
SIKYYLVENFVFDSLYSLIVYYRKNMLRSSEFSIILKEPVPQPKKHEDQE
WFHPNTTKEQAEQGLYRLEIGSFLVRPSVQSINAFVISFTINRKIKHCRI
MQEGRLYGIDTMNFESLVSLINYYTRNPLYRNVKLSHPVSQELLRQALAE
AAQGDHSGGHDDNGASNYMGSNLEENVTCKALYSYKANKPDELSFPKHAI
ITNVQRDNSMWWIGDYGGMIKKHLPANYVKVIDSTTEDYNSLNEEGTDGR
TDSIEIFGAVASLFESNDPGIIFKLQIQTPTMQNPFVIGFDNQETAYEWI
KAIQEAALIASQLASERRKKERTARVAKEMSDLIIYFRSVPFREHSWIFQ
EMSSFPETKAEKQFFQQNTQLFLSYHRNQISRVYPKGQRLDSSNFNPMPF
WNVGSQMIALNYQTGDKAMQLNQAKFRNNGQCGYILKPSFMKSDSFNPNN
PLCDGLSEVKVSIRLIAARHLFRGGKSNNPQIVVELIGASFDTGVKYRTK
VNENGFNPVWNESCEFNVRNPQFAILRFEVQDEDMFAETHFIAQACYPLT
CIRQGYRSVILRNKFSEELELSSLLINIKIANVTAP*

RE62235.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:35:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19146-PA 1234 GF19146-PA 1..1233 1..1235 5852 87.5 Plus
Dana\GF19456-PA 1095 GF19456-PA 543..805 973..1230 412 38.2 Plus
Dana\GF19456-PA 1095 GF19456-PA 64..488 69..486 401 28 Plus
Dana\GF20639-PA 1315 GF20639-PA 208..459 213..461 391 38.1 Plus
Dana\GF20639-PA 1315 GF20639-PA 579..847 969..1232 349 34.5 Plus
Dana\GF20186-PA 965 GF20186-PA 251..339 701..789 163 40.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:35:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17956-PA 1236 GG17956-PA 1..1236 1..1236 6642 98.5 Plus
Dere\GG18703-PA 953 GG18703-PA 404..666 973..1230 408 37.5 Plus
Dere\GG24713-PA 1318 GG24713-PA 208..459 213..461 395 38.1 Plus
Dere\GG24713-PA 1318 GG24713-PA 588..856 969..1232 348 34.2 Plus
Dere\GG18703-PA 953 GG18703-PA 64..391 69..394 259 26.2 Plus
Dere\GG19350-PA 954 GG19350-PA 253..341 701..789 163 40.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:35:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12692-PA 1232 GH12692-PA 1..1228 1..1232 5590 83.8 Plus
Dgri\GH24286-PA 1094 GH24286-PA 542..804 973..1230 411 38.2 Plus
Dgri\GH24286-PA 1094 GH24286-PA 64..488 69..486 398 27.4 Plus
Dgri\GH10584-PA 1315 GH10584-PA 208..459 213..461 391 38.1 Plus
Dgri\GH10584-PA 1315 GH10584-PA 591..859 969..1232 350 34.9 Plus
Dgri\GH17640-PA 954 GH17640-PA 253..341 701..789 163 40.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:30
Subject Length Description Subject Range Query Range Score Percent Strand
sl-PA 1236 CG4200-PA 1..1236 1..1236 6505 100 Plus
Plc21C-PH 1306 CG4574-PH 209..467 214..469 419 39.4 Plus
Plc21C-PC 1311 CG4574-PC 209..467 214..469 419 39.4 Plus
Plc21C-PB 1312 CG4574-PB 209..467 214..469 419 39.4 Plus
Plc21C-PA 1312 CG4574-PA 209..467 214..469 419 39.4 Plus
Plc21C-PD 1318 CG4574-PD 209..467 214..469 419 39.4 Plus
norpA-PE 1095 CG3620-PE 65..471 70..470 413 28.9 Plus
norpA-PB 1095 CG3620-PB 65..471 70..470 413 28.9 Plus
norpA-PA 1095 CG3620-PA 65..471 70..470 413 28.9 Plus
norpA-PC 1095 CG3620-PC 65..471 70..470 412 29.2 Plus
norpA-PD 1095 CG3620-PD 65..471 70..470 412 29.2 Plus
norpA-PF 1095 CG3620-PF 65..471 70..470 412 29.2 Plus
norpA-PE 1095 CG3620-PE 543..805 973..1230 391 36.9 Plus
norpA-PB 1095 CG3620-PB 543..805 973..1230 391 36.9 Plus
norpA-PA 1095 CG3620-PA 543..805 973..1230 391 36.9 Plus
norpA-PC 1095 CG3620-PC 543..805 973..1230 391 36.9 Plus
norpA-PD 1095 CG3620-PD 543..805 973..1230 391 36.9 Plus
norpA-PF 1095 CG3620-PF 543..805 973..1230 391 36.9 Plus
Plc21C-PH 1306 CG4574-PH 588..854 969..1230 331 34.4 Plus
Plc21C-PC 1311 CG4574-PC 588..854 969..1230 331 34.4 Plus
Plc21C-PB 1312 CG4574-PB 588..854 969..1230 331 34.4 Plus
Plc21C-PA 1312 CG4574-PA 588..854 969..1230 331 34.4 Plus
Plc21C-PD 1318 CG4574-PD 588..854 969..1230 331 34.4 Plus
Plc21C-PG 1250 CG4574-PG 527..793 969..1230 331 34.4 Plus
Plc21C-PG 1250 CG4574-PG 299..406 366..469 257 49.1 Plus
vap-PF 954 CG9209-PF 253..341 701..789 162 40.4 Plus
vap-PE 954 CG9209-PE 253..341 701..789 162 40.4 Plus
vap-PC 954 CG9209-PC 253..341 701..789 162 40.4 Plus
vap-PB 954 CG9209-PB 253..341 701..789 162 40.4 Plus
vap-PA 954 CG9209-PA 253..341 701..789 162 40.4 Plus
vap-PD 954 CG9209-PD 253..341 701..789 162 40.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:35:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14457-PA 1231 GI14457-PA 1..1226 1..1231 5611 84 Plus
Dmoj\GI16411-PA 1094 GI16411-PA 64..488 69..486 415 28.4 Plus
Dmoj\GI16411-PA 1094 GI16411-PA 542..804 973..1230 410 38.2 Plus
Dmoj\GI23110-PA 1328 GI23110-PA 208..459 213..461 398 38.1 Plus
Dmoj\GI23110-PA 1328 GI23110-PA 587..855 969..1232 354 34.5 Plus
Dmoj\GI16079-PA 954 GI16079-PA 253..497 701..972 163 26 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:35:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15831-PA 642 GL15831-PA 1..640 1..626 2921 85.1 Plus
Dper\GL14297-PA 924 GL14297-PA 543..805 973..1230 407 38.2 Plus
Dper\GL14297-PA 924 GL14297-PA 64..442 69..445 387 28.1 Plus
Dper\GL18869-PA 839 GL18869-PA 210..423 256..461 377 39.7 Plus
Dper\GL18869-PA 839 GL18869-PA 554..826 969..1236 358 35.1 Plus
Dper\GL15969-PA 903 GL15969-PA 202..446 701..972 166 25.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:35:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\small-wing-PA 1250 GA18024-PA 1..1249 1..1235 5967 88.5 Plus
Dpse\GA17564-PA 1095 GA17564-PA 543..805 973..1230 408 38.2 Plus
Dpse\GA17564-PA 1095 GA17564-PA 64..442 69..445 387 28.1 Plus
Dpse\GA18269-PA 1290 GA18269-PA 209..460 213..461 384 37.4 Plus
Dpse\GA18269-PA 1290 GA18269-PA 556..824 969..1232 352 34.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:35:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13428-PA 807 GM13428-PA 223..807 597..1236 3053 89.7 Plus
Dsec\GM12340-PA 1095 GM12340-PA 543..805 973..1230 404 37.5 Plus
Dsec\GM12340-PA 1095 GM12340-PA 64..488 69..486 402 28.5 Plus
Dsec\GM16735-PA 756 GM16735-PA 208..459 213..461 394 38.1 Plus
Dsec\GM16735-PA 756 GM16735-PA 588..747 969..1121 263 38.7 Plus
Dsec\GM11672-PA 933 GM11672-PA 232..320 701..789 163 40.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:35:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24832-PA 458 GD24832-PA 1..447 751..1201 2310 95.1 Plus
Dsim\GD17281-PA 292 GD17281-PA 1..267 324..597 1336 92 Plus
Dsim\GD17280-PA 178 GD17280-PA 1..132 1..132 697 98.5 Plus
Dsim\GD23017-PA 1318 GD23017-PA 209..459 214..461 395 38.3 Plus
Dsim\GD23017-PA 1318 GD23017-PA 588..856 969..1232 348 34.2 Plus
Dsim\GD24496-PA 717 GD24496-PA 253..341 701..789 164 40.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:35:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\small-wing-PA 1231 GJ18791-PA 1..1227 1..1232 5661 84.8 Plus
Dvir\GJ17032-PA 1094 GJ17032-PA 542..804 973..1230 410 38.2 Plus
Dvir\GJ17032-PA 1094 GJ17032-PA 64..488 69..486 405 28.1 Plus
Dvir\GJ23620-PA 1313 GJ23620-PA 209..459 214..461 393 38.3 Plus
Dvir\GJ23620-PA 1313 GJ23620-PA 591..859 969..1232 350 34.5 Plus
Dvir\GJ15727-PA 954 GJ15727-PA 253..341 701..789 163 40.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:35:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25059-PA 1281 GK25059-PA 1..1279 1..1235 5589 82.6 Plus
Dwil\GK15712-PA 1095 GK15712-PA 543..805 973..1230 411 38.2 Plus
Dwil\GK15712-PA 1095 GK15712-PA 64..488 69..486 400 28.8 Plus
Dwil\GK23786-PA 1324 GK23786-PA 208..459 213..461 395 38.5 Plus
Dwil\GK23786-PA 1324 GK23786-PA 593..861 969..1232 343 34.2 Plus
Dwil\GK20115-PA 956 GK20115-PA 255..499 701..972 166 26.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:35:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17264-PA 1233 GE17264-PA 1..1233 1..1236 6614 98.3 Plus
Dyak\GE16341-PA 1095 GE16341-PA 543..805 973..1230 405 37.5 Plus
Dyak\Plc21C-PA 1313 GE16747-PA 208..459 213..461 395 38.1 Plus
Dyak\GE16341-PA 1095 GE16341-PA 64..442 69..445 391 29.3 Plus
Dyak\Plc21C-PA 1313 GE16747-PA 583..851 969..1232 347 34.2 Plus
Dyak\GE15997-PA 954 GE15997-PA 253..341 701..789 163 40.4 Plus

RE62235.hyp Sequence

Translation from 267 to 3977

> RE62235.hyp
MSCFSAMSAPLLGEMEQTIGMLERGTIVTKLYGKQRRPDRRHLMLIRETR
QLLWATVATQTPRTDYEGAIQLREIREIRVGKHSKEFRLFADDCQRFESS
KCFVILHGNHFKLKSFSVVALSEIEADNWVRGLRYMVKDTLGAPYPLQID
RWLRREYYQIENVNTHSAKATEQSPAQVTIKDFKLFLAGVSCKMTTGKFM
EHFTEDVRRKHDLKFDDFSRLYQKLLLPNGFASVLSGSGVANFPYSEDQQ
VVRPAELKQFLETEQRDVSASEISSAAIASFIRDFVQDVERDVQEPYLTF
PEFVDFLFSKQNDLWNSKYDQVFMDMNLPLSSYWIASSHNTYLTGDQFSS
ESSCEAYARALRMGCRCIELDCWNGPDNLPYIFHGHTITSKIKFMDVIKT
IKDHAFTSSEYPVILSIEQNCSLEQQRNMAQALIEVFGDMLLTQPCDRNE
QHLPSPYQLRRKIILKHKKLPQFDDIANGISSTGSLGHRSSLGGAGGGAH
GENDGENVRKVFKEGLLYFKDPVDKSWNLYQFVLTHQELIYSSEINESRN
GNSEDDDFGLSSSCSLNSNMQQKQKDTSANDELHFGENWFHGKLEGGRKE
ADDLLKKYKHFGDGTFLVRESATFVGDYSLSFWRRNRPNHCRIKLKHENG
SIKYYLVENFVFDSLYSLIVYYRKNMLRSSEFSIILKEPVPQPKKHEDQE
WFHPNTTKEQAEQGLYRLEIGSFLVRPSVQSINAFVISFTINRKIKHCRI
MQEGRLYGIDTMNFESLVSLINYYTRNPLYRNVKLSHPVSQELLRQALAE
AAQGDHSGGHDDNGASNYMGSNLEENVTCKALYSYKANKPDELSFPKHAI
ITNVQRDNSMWWIGDYGGMIKKHLPANYVKVIDSTTEDYNSLNEEGTDGR
TDSIEIFGAVASLFESNDPGIIFKLQIQTPTMQNPFVIGFDNQETAYEWI
KAIQEAALIASQLASERRKKERTARVAKEMSDLIIYFRSVPFREHSWIFQ
EMSSFPETKAEKQFFQQNTQLFLSYHRNQISRVYPKGQRLDSSNFNPMPF
WNVGSQMIALNYQTGDKAMQLNQAKFRNNGQCGYILKPSFMKSDSFNPNN
PLCDGLSEVKVSIRLIAARHLFRGGKSNNPQIVVELIGASFDTGVKYRTK
VNENGFNPVWNESCEFNVRNPQFAILRFEVQDEDMFAETHFIAQACYPLT
CIRQGYRSVILRNKFSEELELSSLLINIKIANVTAP*

RE62235.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:31:20
Subject Length Description Subject Range Query Range Score Percent Strand
sl-PA 1236 CG4200-PA 1..1236 1..1236 6505 100 Plus
Plc21C-PH 1306 CG4574-PH 209..467 214..469 419 39.4 Plus
Plc21C-PC 1311 CG4574-PC 209..467 214..469 419 39.4 Plus
Plc21C-PB 1312 CG4574-PB 209..467 214..469 419 39.4 Plus
Plc21C-PA 1312 CG4574-PA 209..467 214..469 419 39.4 Plus
Plc21C-PH 1306 CG4574-PH 588..854 969..1230 331 34.4 Plus
Plc21C-PC 1311 CG4574-PC 588..854 969..1230 331 34.4 Plus
Plc21C-PB 1312 CG4574-PB 588..854 969..1230 331 34.4 Plus