BDGP Sequence Production Resources |
Search the DGRC for RE62259
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 622 |
Well: | 59 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG31813-RA |
Protein status: | RE62259.pep: gold |
Sequenced Size: | 666 |
Gene | Date | Evidence |
---|---|---|
CG31813 | 2002-09-02 | Blastp of sequenced clone |
CG31813 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31813 | 2008-04-29 | Release 5.5 accounting |
CG31813 | 2008-08-15 | Release 5.9 accounting |
CG31813 | 2008-12-18 | 5.12 accounting |
666 bp (666 high quality bases) assembled on 2002-09-02
GenBank Submission: BT001701
> RE62259.complete TCACAACCACTTCCGGCCTTCCACAAGCAACAGTTCGACTGCAACCAACG ATATGTCAGCCAAATATACACTGATCTTTGCCCTGGCGGCTCTCTGCTGT CTGGTGTTCTCCACCGAGGCGGCGGCCCAGCGCAGCCGAGTTCTCAGCTC TCGCCGTGGCTCCGAGCTGGTCGAGAAGACGTCGGACAACAAGGAAGACT CCGAGCTGGCCGCCCAGGAGCAAGACCTGGAGCGCCAGGAGCAGGAGGAG CAGAATGACAGACTGGAGGGACGCAGCGATGATGTTGCCGAGGGCAGCGA CAACAAAGAGGACAAGGAGACCGCCACCAACAACAAGGACACCATCGTGA AGCCCAACAAGGATGACGCCCGTGCCCGCCGCATCGTTCGTGCCGGTCGT CGTCGTGGTGGACGCCGCGGTGGTCGCCGTGGAGGTCGTCGTAGTGCACG CAAATCCGTGCGCCGTGGCGGACGACGAGGTGGACGCAGGCGCGGTGGAC GACGTGGTCGTGGCGGTGCTCGCCGTCGCACCTCCGTGAAGAGGCGTTCC GGCAAGGGCAACAAGGCCTAAGAAGTTCCCCTCACAGATATAAGACTAAC TGCCCGATCCACCGATTCGATACACACACAAATAAATTATGATTCTAACG AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31813-RA | 654 | CG31813-RA | 2..654 | 1..653 | 3265 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 13734830..13735479 | 1..650 | 3250 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13736141..13736793 | 1..653 | 3265 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13736141..13736793 | 1..653 | 3265 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 3493..3538 | 206..161 | 113 | 71.7 | Minus |
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 7555..7693 | 513..381 | 106 | 55.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13734830..13735479 | 1..650 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31813-RA | 1..519 | 53..571 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31813-RA | 1..519 | 53..571 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31813-RA | 1..519 | 53..571 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31813-RA | 1..519 | 53..571 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31813-RA | 1..519 | 53..571 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31813-RA | 2..651 | 1..650 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31813-RA | 2..651 | 1..650 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31813-RA | 4..653 | 1..650 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31813-RA | 2..651 | 1..650 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31813-RA | 4..653 | 1..650 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13736141..13736790 | 1..650 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13736141..13736790 | 1..650 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13736141..13736790 | 1..650 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13736141..13736790 | 1..650 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13736141..13736790 | 1..650 | 100 | Plus |
Translation from 0 to 570
> RE62259.hyp HNHFRPSTSNSSTATNDMSAKYTLIFALAALCCLVFSTEAAAQRSRVLSS RRGSELVEKTSDNKEDSELAAQEQDLERQEQEEQNDRLEGRSDDVAEGSD NKEDKETATNNKDTIVKPNKDDARARRIVRAGRRRGGRRGGRRGGRRSAR KSVRRGGRRGGRRRGGRRGRGGARRRTSVKRRSGKGNKA*
Translation from 52 to 570
> RE62259.pep MSAKYTLIFALAALCCLVFSTEAAAQRSRVLSSRRGSELVEKTSDNKEDS ELAAQEQDLERQEQEEQNDRLEGRSDDVAEGSDNKEDKETATNNKDTIVK PNKDDARARRIVRAGRRRGGRRGGRRGGRRSARKSVRRGGRRGGRRRGGR RGRGGARRRTSVKRRSGKGNKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23017-PA | 169 | GF23017-PA | 1..104 | 1..105 | 322 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23872-PA | 153 | GG23872-PA | 1..110 | 1..120 | 309 | 67.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31813-PB | 172 | CG31813-PB | 1..172 | 1..172 | 862 | 100 | Plus |
CG31813-PA | 172 | CG31813-PA | 1..172 | 1..172 | 862 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26081-PA | 166 | GL26081-PA | 1..120 | 1..123 | 270 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16497-PA | 166 | GA16497-PA | 1..120 | 1..123 | 269 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15146-PA | 170 | GM15146-PA | 1..170 | 1..172 | 456 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23916-PA | 170 | GD23916-PA | 1..170 | 1..172 | 453 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24508-PA | 157 | GK24508-PA | 1..97 | 1..105 | 244 | 56.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\BG:DS08249.4-PA | 168 | GE18676-PA | 1..168 | 1..172 | 417 | 87.2 | Plus |