BDGP Sequence Production Resources |
Search the DGRC for RE62510
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 625 |
Well: | 10 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG42565-RA |
Protein status: | RE62510.pep: gold |
Preliminary Size: | 320 |
Sequenced Size: | 2647 |
Gene | Date | Evidence |
---|---|---|
CG13510 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13510 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13512 | 2005-05-16 | Blastp of sequenced clone |
CG13512 | 2008-04-29 | Release 5.5 accounting |
CG13510 | 2008-08-15 | Release 5.9 accounting |
CG13512 | 2008-08-15 | Release 5.9 accounting |
CG13512 | 2008-12-18 | 5.12 accounting |
CG13510 | 2008-12-18 | 5.12 accounting |
2647 bp (2647 high quality bases) assembled on 2005-05-16
GenBank Submission: BT022713
> RE62510.complete AGTGCAACGCCAGCCAGCAAAGCGATCGGTTCAGTTCGGCCGGAAATCCA GAGTCTGCATCAAGAAGAAACATAATCCGAAACTATGGACAGCAAGCAGC CTCCACCGTACAGTGAACAGTCCGGATACACTCCCGCACAAACCTATCAG CCCGGTGGCCCCACCCAGCCACCACTGTACCCACCGATGCCGCAGCCACC GCAGTCCTCAACGGTGATCATCCAGACCACCACAACCTCCAACCTGGTGC CCATCGGCAGTGGACCCACCCGCATCCGCTGTCCCTCCTGTCACGCCGAA GTACTGACCACCGTGAAGTCCACTCCTTCCGGCAGGACGCACTGCTGGGC CCTCATCCTGTGCCTGTTCATCTGCTGGCCGTGCGTATGCCTACCTTACT GCATGGACTCCTGCCAGAATGCCAACCACTACTGCCCCAACTGCAGCGCC TACATCGGCACCTACGAGAACTAACTAACTAACGCCTATTTATGCATACA AACGTATATACCTATAGAGAACCCTAAGCACTAGCGTCATAACCGAGAAA AATTGAACTGTAAATACACATGTACGAACGCCACACATTAAACTCATGAG ACTCACACAGGAAACAGAAATGCGACAAGATATCTTGGGACAAGGCACTC TTTCCGCTAAATGGATTATGAAGTAATTTAATATTTTCAGAAATGTCTAT GATAATGTTGACATTATTTAGTATTTTCCACTACATTTTGTACTGGTACT AAACAATTTCGATCGATCATTACGAGAAACCAACGCCAACATTTTAATGA CCATTTTAAAACAATCTTTTTACTTTTTACTATCGCTTAAAAACCGTAAT CAGTAAAATGGATCATAAATATCATAAATAGCTAAGACTATATCAATTGT TGTCTAGGAAACATAAACCCTTCTGGCACCTACTCAAGCCAACAACTGGA AATGGCCAAATGGCACAGAGCTACTGGAACCGAATGTCAATCGATTAGGT ACTGCACTGGCCGACTCCTCTTGTACCCCTCCATATCGTCATAGTCATAG TAGGTTTCACCTAAAAAGTACTTGTCGATTAGTCAGAAAAGATAACGATT GCGATAGAGCAATGTTGTCATTAAATGGCGGGCTATTTCAGTGCATGCCC CGCCGCAAACATGAGCAGCACATGGATGGGCAGAGCTCCAGAACCGGCCG ACACGGAAATGGTGACCGTAACCACGCAGCCAAACTATGGGGTGGTGGTG ACCCAGATACCCGTCTACACCCTGAACGGAGTGGGGCCGGGCGCACATCC ACTGGCTGTGGGCTGCAAGCCGATGAGGGTGAGGTGTCCGTCCTGCAGGG GCGAGGTCACCACCAGTCTGGCCACGTCCCCCACCCGCAAGACCCACATG TGCGCTCTGACCTTGTATATCTGCTGGTGAGTGGGGCGTCAGGATACCAC CGGGCTTACTAACTTTGCTAACCTGATTCTCCAGCTGCTGGCCCTTCATC TGCCTTCCCTACTTCATCAACTACTGCAAGAGTGTCCAGCACTACTGTCC CAACTGTGGATGCCACATTGGGAGCTATAGCATTTGATCAAGTGCTGTGT CTCCGCACTGCCAAAAATGCCTTCCATGTCAAGACTTAATCAAGATTAGC CATATATGTATACAGATACATAAAATAATAACGTTTTAAATTTAAGTTCT TTTTGTTAATGACGGATGGTTTCTACTACTCTCACTGCACATATGAAGTA ATCTTTTCTGGTCCATAATTTCCTCACCTAGTGTGCCAGTAGATAGATTT TATATTCGTATTAGGATAAATACCCAGAATATGAGGAAAGCGAATCAATT GAGTACCGATACCGATAAGGCAGTTCTGAGTTTAATGAAACTGTCATCGA TATACATATACGGAAGCTTTCAGTATTATATCAGTGCTCGTTCGCAGCTG TAAGCAACTGGTTGATATTTTTAGTGTGATTTGAAGAGTATAGAAAAGCA TGCGTTGCTACAAGCGCGTAGACTCCCCGCCGCCCTACTCGGATCCATTC GCCACCGCTCCTCCAGCGGAGGACGTCATGCAGCAGAACCTGGCGTCGCC CGCACATCCCAATCCGGTGATACCCGTGATGGCCCAAACCATGCCGGTGT TGCAGCCCGTAAGCGTGATGCATCACCAGACGACAGTGCTGGTGGACAAT ACCCGCCAGGGAACGATCTGTCCCCACTGCAACGCTCGGATTCGCCTTCG CGTGGAGCACCATCCTACCGGATCAACTTACTGTATGGCGGCGTTGCTCT GCCTATTCCTATGCTGGCCCTGCGTCTGCGCCCCTTGCTGCTGCAACTGT TGCTACAAGACCTCCCAGTACTGTCCCAACTGCAACTCCTGCTTGGGTTC GTTTTGAAGACGCAGCGAAAACACTCGCCGATTTCATATCATTTCATTTT ATATATATGTATATATATATACATAACCAACTATACATACATATATGTAT GTATGTTCATATCTCCTTATGTATCGACGGCGTCAATGTGGTGTCTTCAT CACTTAACATACATAAAAATATGTTTGCTTAGTGAGCAAAATAAGCTGAC AGCGAAAAAATAAACAAATAGATTTTGAAACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13510-RA | 985 | CG13510-RA | 114..985 | 1..872 | 4360 | 100 | Plus |
CG42565-RA | 838 | CG42565-RA | 1..832 | 1798..2629 | 4145 | 99.8 | Plus |
CG13511-RA | 818 | CG13511-RA | 1..563 | 864..1426 | 2815 | 100 | Plus |
CG13511-RA | 818 | CG13511-RA | 563..818 | 1484..1739 | 1280 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 18545487..18547425 | 372..2310 | 9605 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 18544469..18544839 | 1..371 | 1840 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 18547632..18547946 | 2311..2629 | 1485 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 22658923..22660861 | 372..2310 | 9680 | 99.9 | Plus |
2R | 25286936 | 2R | 22657905..22658275 | 1..371 | 1855 | 100 | Plus |
2R | 25286936 | 2R | 22661069..22661387 | 2311..2629 | 1595 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 22660122..22662060 | 372..2310 | 9680 | 99.9 | Plus |
2R | 25260384 | 2R | 22659104..22659474 | 1..371 | 1855 | 100 | Plus |
2R | 25260384 | 2R | 22662268..22662586 | 2311..2629 | 1595 | 100 | Plus |
2R | 25260384 | 2R | 22665399..22665475 | 397..473 | 145 | 79.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 18544469..18544839 | 1..371 | 99 | -> | Plus |
chr2R | 18545487..18547425 | 372..2310 | 99 | -> | Plus |
chr2R | 18547632..18547770 | 2311..2449 | 100 | == | Plus |
chr2R | 18547822..18547948 | 2505..2631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13512-RA | 1..408 | 2000..2407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42565-RA | 1..408 | 2000..2407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42565-RA | 1..408 | 2000..2407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13512-RA | 1..408 | 2000..2407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42565-RA | 1..408 | 2000..2407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13512-RA | 1..698 | 1932..2629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42565-RA | 1..700 | 1932..2631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13510-RB | 1..875 | 1..875 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13512-RA | 1..698 | 1932..2629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13510-RC | 5..1437 | 1..1434 | 99 | == | Plus |
CG13510-RC | 1438..2577 | 1492..2631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22661069..22661389 | 2311..2631 | 99 | Plus | |
2R | 22657905..22658275 | 1..371 | 100 | -> | Plus |
2R | 22658923..22660861 | 372..2310 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22661069..22661389 | 2311..2631 | 99 | Plus | |
2R | 22657905..22658275 | 1..371 | 100 | -> | Plus |
2R | 22658923..22660861 | 372..2310 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22661069..22661389 | 2311..2631 | 99 | Plus | |
2R | 22657905..22658275 | 1..371 | 100 | -> | Plus |
2R | 22658923..22660861 | 372..2310 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 18545410..18545780 | 1..371 | 100 | -> | Plus |
arm_2R | 18546428..18548366 | 372..2310 | 99 | -> | Plus |
arm_2R | 18548574..18548894 | 2311..2631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22659104..22659474 | 1..371 | 100 | -> | Plus |
2R | 22660122..22662060 | 372..2310 | 99 | -> | Plus |
2R | 22662268..22662588 | 2311..2631 | 99 | Plus |
Translation from 1999 to 2406
> RE62510.hyp MRCYKRVDSPPPYSDPFATAPPAEDVMQQNLASPAHPNPVIPVMAQTMPV LQPVSVMHHQTTVLVDNTRQGTICPHCNARIRLRVEHHPTGSTYCMAALL CLFLCWPCVCAPCCCNCCYKTSQYCPNCNSCLGSF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42565-PB | 135 | CG42565-PB | 1..135 | 1..135 | 783 | 100 | Plus |
CG42565-PA | 135 | CG42565-PA | 1..135 | 1..135 | 783 | 100 | Plus |
CG13510-PC | 129 | CG13510-PC | 6..127 | 10..135 | 225 | 36.7 | Plus |
CG13510-PB | 129 | CG13510-PB | 6..127 | 10..135 | 225 | 36.7 | Plus |
CG13510-PA | 129 | CG13510-PA | 6..127 | 10..135 | 225 | 36.7 | Plus |
Translation from 1999 to 2406
> RE62510.pep MRCYKRVDSPPPYSDPFATAPPAEDVMQQNLASPAHPNPVIPVMAQTMPV LQPVSVMHHQTTVLVDNTRQGTICPHCNARIRLRVEHHPTGSTYCMAALL CLFLCWPCVCAPCCCNCCYKTSQYCPNCNSCLGSF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11283-PA | 145 | GF11283-PA | 3..145 | 4..135 | 220 | 60.1 | Plus |
Dana\GF11281-PA | 129 | GF11281-PA | 66..127 | 74..135 | 170 | 46.8 | Plus |
Dana\GF11635-PA | 127 | GF11635-PA | 42..124 | 53..135 | 148 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21061-PA | 129 | GG21061-PA | 4..127 | 8..135 | 169 | 31.3 | Plus |
Dere\GG22779-PA | 128 | GG22779-PA | 32..125 | 42..135 | 161 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19762-PA | 102 | GH19762-PA | 1..100 | 27..135 | 178 | 37.6 | Plus |
Dgri\GH19761-PA | 135 | GH19761-PA | 72..133 | 74..135 | 167 | 46.8 | Plus |
Dgri\GH19768-PA | 137 | GH19768-PA | 47..134 | 48..135 | 137 | 34.1 | Plus |
Dgri\GH19769-PA | 142 | GH19769-PA | 74..139 | 70..135 | 135 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42565-PB | 135 | CG42565-PB | 1..135 | 1..135 | 783 | 100 | Plus |
CG42565-PA | 135 | CG42565-PA | 1..135 | 1..135 | 783 | 100 | Plus |
CG13510-PC | 129 | CG13510-PC | 6..127 | 10..135 | 225 | 36.7 | Plus |
CG13510-PB | 129 | CG13510-PB | 6..127 | 10..135 | 225 | 36.7 | Plus |
CG13510-PA | 129 | CG13510-PA | 6..127 | 10..135 | 225 | 36.7 | Plus |
CG30273-PB | 128 | CG30273-PB | 5..125 | 28..135 | 196 | 33.1 | Plus |
CG13516-PB | 168 | CG13516-PB | 38..161 | 7..135 | 172 | 33.6 | Plus |
CG13516-PA | 168 | CG13516-PA | 38..161 | 7..135 | 172 | 33.6 | Plus |
CG30269-PB | 144 | CG30269-PB | 30..141 | 21..135 | 170 | 34.2 | Plus |
CG30269-PA | 144 | CG30269-PA | 30..141 | 21..135 | 170 | 34.2 | Plus |
CG42566-PA | 77 | CG42566-PA | 13..75 | 73..135 | 157 | 34.9 | Plus |
CG42566-PB | 77 | CG42566-PB | 13..75 | 73..135 | 157 | 34.9 | Plus |
CG32280-PD | 130 | CG32280-PD | 6..128 | 19..135 | 146 | 29.3 | Plus |
CG32280-PC | 130 | CG32280-PC | 6..128 | 19..135 | 146 | 29.3 | Plus |
CG32280-PB | 130 | CG32280-PB | 6..128 | 19..135 | 146 | 29.3 | Plus |
CG32280-PA | 130 | CG32280-PA | 6..128 | 19..135 | 146 | 29.3 | Plus |
CG13511-PB | 122 | CG13511-PB | 59..120 | 74..135 | 137 | 35.5 | Plus |
CG13511-PA | 122 | CG13511-PA | 59..120 | 74..135 | 137 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20301-PA | 119 | GI20301-PA | 1..117 | 1..130 | 208 | 40.3 | Plus |
Dmoj\GI20298-PA | 135 | GI20298-PA | 72..133 | 74..135 | 171 | 48.4 | Plus |
Dmoj\GI20300-PA | 165 | GI20300-PA | 81..162 | 55..134 | 162 | 41.5 | Plus |
Dmoj\GI20299-PA | 103 | GI20299-PA | 40..101 | 74..135 | 157 | 46.8 | Plus |
Dmoj\GI20307-PA | 126 | GI20307-PA | 62..123 | 74..135 | 137 | 41.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11361-PA | 129 | GL11361-PA | 66..127 | 74..135 | 174 | 48.4 | Plus |
Dper\GL11363-PA | 136 | GL11363-PA | 1..136 | 1..135 | 169 | 51.1 | Plus |
Dper\GL11366-PA | 129 | GL11366-PA | 14..126 | 16..135 | 162 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12335-PA | 129 | GA12335-PA | 66..127 | 74..135 | 174 | 48.4 | Plus |
Dpse\GA24695-PA | 136 | GA24695-PA | 1..136 | 1..135 | 169 | 51.1 | Plus |
Dpse\GA15742-PA | 129 | GA15742-PA | 14..126 | 16..135 | 162 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15933-PA | 135 | GM15933-PA | 1..135 | 1..135 | 518 | 85.9 | Plus |
Dsec\GM15931-PA | 129 | GM15931-PA | 66..127 | 74..135 | 169 | 46.8 | Plus |
Dsec\GM15936-PA | 156 | GM15936-PA | 71..153 | 53..135 | 159 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11686-PA | 135 | GD11686-PA | 1..135 | 1..135 | 508 | 85.2 | Plus |
Dsim\GD11684-PA | 129 | GD11684-PA | 66..127 | 74..135 | 169 | 46.8 | Plus |
Dsim\GD11689-PA | 128 | GD11689-PA | 43..125 | 53..135 | 163 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22028-PA | 133 | GJ22028-PA | 1..133 | 1..135 | 221 | 49.3 | Plus |
Dvir\GJ22026-PA | 137 | GJ22026-PA | 74..135 | 74..135 | 162 | 45.2 | Plus |
Dvir\GJ22027-PA | 152 | GJ22027-PA | 67..149 | 56..134 | 142 | 42.2 | Plus |
Dvir\GJ22033-PA | 113 | GJ22033-PA | 49..110 | 74..135 | 133 | 41.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21441-PA | 153 | GK21441-PA | 1..153 | 1..135 | 303 | 49.4 | Plus |
Dwil\GK21440-PA | 130 | GK21440-PA | 4..128 | 8..135 | 183 | 35.2 | Plus |
Dwil\GK21444-PA | 121 | GK21444-PA | 29..118 | 46..135 | 177 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14005-PA | 131 | GE14005-PA | 3..131 | 4..135 | 419 | 78.2 | Plus |
Dyak\GE14003-PA | 128 | GE14003-PA | 65..126 | 74..135 | 169 | 46.8 | Plus |
Dyak\GE14008-PA | 128 | GE14008-PA | 43..125 | 53..135 | 162 | 38.6 | Plus |