BDGP Sequence Production Resources |
Search the DGRC for RE62692
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 626 |
Well: | 92 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG4670-RA |
Protein status: | RE62692.pep: gold |
Preliminary Size: | 2187 |
Sequenced Size: | 2382 |
Gene | Date | Evidence |
---|---|---|
CG4670 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4670 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4670 | 2003-02-21 | Blastp of sequenced clone |
CG4670 | 2008-04-29 | Release 5.5 accounting |
CG4670 | 2008-08-15 | Release 5.9 accounting |
CG4670 | 2008-12-18 | 5.12 accounting |
2382 bp (2382 high quality bases) assembled on 2003-02-21
GenBank Submission: BT004854
> RE62692.complete AGTTAATCAAACCACTTGCGACCGTAAAACATTCCAAATGCTTCGGTGAA GTTAAATCTTATCGCAGCAGAGCAGTCGCGTTCCACATCGCATTCCGTAC GAATCGCAGCCGCAACCGATCCCGCAAATTGGGTAGATCCGCAAAATGTC GGCGACGCACCTGGTGATTCTGGCCGTCGCTCTGCTGGTGGACATCGCAT CCGCGGGCGTTCCCCTTCCGCGATACGAGGCGCTCCTCAAGCAGCAGTCC CCTCCATCGGATCCCACACTGGGTCTCTACGACGACGGGGATAAGGTTAT CCGCCTGTCGGTCGACAACTTCAATGCTACCGTCCTGGACCAGAATCGCG GAGCATTAGTCGAGTTCTACAACACTTACTGCGGCCACTGTCGCAGATTC GCACCCACGTACAAGTCGGTAGCGGAGCACCTGTTGCCCTGGTCCGAGGT GCTCATCGTGGCGGCCATCGATTGCGCCGCCGAGGAGAACAATGGCATCT GCCGCAACTACGAGGTGATGGGCTATCCAACGCTACGTTATCTGGGCCCC GGTTTCCAGCCGGGTCCTCAGCATTACGGGCAGAGCCTGCATACGCAGGA TAAAAACGAAATCCGCGAAATACTAGCGGGTATGGTGGCCGCAGAGAACC TGACCAGCAGCCACAACAATTCCTACTGGCCAAACTTTCACTACTTAACG GAGAACGATTCAGCCAGCAGTTTGTTCGAAGGTCTCAGCAGCGCCACGGA GTACGTGGCAGTGGTTCACGAACCGGAGAACACCACTCTAGGCGTCGAGG TGGCTCTGTTCATGACCCAGTGGCCAGCGGTGAGGGTCCGGCGCGTCATC GATCCAGCCGTGGCCGCCAAATTCAAGATTGATCCGACCAATCTGCCCCT CAGCTTGGTGGATCGCAAAGGTGAAATTACGGCGTACGCGCCGGAATCTA CCAATGGTGAATCGTATGCCAAGAAGCTGTGGGATGTACTGGGTAAGAAG AATATCACTCCCAGGCCAGTGAAGGTGCACCAACCATCGGCAACGCCGGC GTCCAAGATTAAGGGACAAAACGAATTGATCGATGAAGTGCACCGGAACA AGCACTTCGTCTACCAGGCGGATCTCGAGCAGGCCATACGCACGGTGCTG CACAACGAGGTGTCCAAGGTGGGCGAGATCAGTGGCGAGAAACTGCTCGC ACTGCAGCGATTCCTAGCTGTGCTGCAGCGCTACAATCCGCTCGGCGCCA ATGGCCACCAGCTGGTGTCCAAGCTGAAGGACTACGTGGTACAGTTCAAC GATCAACGACTGACGGGTAGCCAGTTCGAGGAGGAGCTGAAGCGCCTAGA GGCTCATCTCTCGCCCGTCTACTCATCCAACCACTTTGTGGGTTGCGTTG GATCCAGTCCCCGCCTGCGCGGCTTCAGTTGCTCCCTGTGGACACTCTTC CACTTCATGACCGTGCAGGCGGCCAACAATGAGGAGACCCAGGATCCGCT GGAAGTCTTGCAGGCCATGCACGGGTACATCAAGAACTTCTTCGGCTGCA CCGAGTGCTCCGAGCACTTTCAGGCAATGGCATCGAGGCGAAAAATCTGG AGTGTGCCGAACAAAGAGGAAGCTGTTCTGTGGCTTTGGGCTGCGCACAA CGAGGTGAACCAGCGCCTGGCAGGCGATGCCACCGAGGATCCAGAGTTCC CCAAGAAGCAATTCCCAGCGCCGGAAAGCTGCAACGAATGCTACCGCACG CCCGTCTCCAAGTCGGAGAACTTGGAGATCGAATGGAACAAGGACGCCGT GCTGGGCTTCCTCAAGAACATACACAATCCGCAGTTCGTTAGCCGGTACG GTGTGCAGCGGGAGGAGCTGCTGCATCCCACGGCGGACAAAATGCGGCAG AAGCGACAGATCTCAAGTGTCTTCACCGACATGGATATGCGGATGGGCAT GCTGCTGTACGCCTTCTGCATTGTGATGATGGTGTTGGCATTTAAATTGT TCGCCTTCAAGGGATACCGCAAGAAGCCCTATGGCCACGATCTCCTGGGC AAGGTGTAGGTTAATCCGCAGGAAAGCTTTCACATATTCTAAACAACAAA GAAAAGACACCGAACACCGAGAAACGGAATTTAACACGCCACCTCATTGC ATGATTTGTATTCGTGGCACCTAGAGTTATGATTAAGTTAAAAGTGTGTA TATATATATATATATTGTATGAACGAACAGTCCTCTTCCAGTTGTAGTCC CTAACCTAATCGCTTTTTACCACGACGATGCACCTGATTGCTTTATTCTT AGGCATGCAAATGTGATTTTTCCCTCCAGAAGTGACAGTTTGAATAAAAA CGATCAATGCTAGACGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 2481..2551 | 1311..1238 | 119 | 66.2 | Minus |
baggins | 5453 | baggins BAGGINS 5453bp | 5166..5219 | 1946..1892 | 119 | 70.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9119114..9119906 | 1574..2366 | 99 | <- | Minus |
chr2R | 9120826..9122398 | 1..1573 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4670-RA | 1..1914 | 146..2059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4670-RA | 1..1914 | 146..2059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4670-RA | 1..1914 | 146..2059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4670-RA | 1..1914 | 146..2059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4670-RA | 1..1914 | 146..2059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4670-RA | 1..2366 | 1..2366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4670-RA | 1..2366 | 1..2366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4670-RA | 5..2370 | 1..2366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4670-RA | 1..2366 | 1..2366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4670-RA | 5..2370 | 1..2366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13231758..13232550 | 1574..2366 | 100 | <- | Minus |
2R | 13233470..13235042 | 1..1573 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13231758..13232550 | 1574..2366 | 100 | <- | Minus |
2R | 13233470..13235042 | 1..1573 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13231758..13232550 | 1574..2366 | 100 | <- | Minus |
2R | 13233470..13235042 | 1..1573 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9120975..9122547 | 1..1573 | 100 | Minus | |
arm_2R | 9119263..9120055 | 1574..2366 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13234669..13236241 | 1..1573 | 100 | Minus | |
2R | 13232957..13233749 | 1574..2366 | 100 | <- | Minus |
Translation from 145 to 2058
> RE62692.pep MSATHLVILAVALLVDIASAGVPLPRYEALLKQQSPPSDPTLGLYDDGDK VIRLSVDNFNATVLDQNRGALVEFYNTYCGHCRRFAPTYKSVAEHLLPWS EVLIVAAIDCAAEENNGICRNYEVMGYPTLRYLGPGFQPGPQHYGQSLHT QDKNEIREILAGMVAAENLTSSHNNSYWPNFHYLTENDSASSLFEGLSSA TEYVAVVHEPENTTLGVEVALFMTQWPAVRVRRVIDPAVAAKFKIDPTNL PLSLVDRKGEITAYAPESTNGESYAKKLWDVLGKKNITPRPVKVHQPSAT PASKIKGQNELIDEVHRNKHFVYQADLEQAIRTVLHNEVSKVGEISGEKL LALQRFLAVLQRYNPLGANGHQLVSKLKDYVVQFNDQRLTGSQFEEELKR LEAHLSPVYSSNHFVGCVGSSPRLRGFSCSLWTLFHFMTVQAANNEETQD PLEVLQAMHGYIKNFFGCTECSEHFQAMASRRKIWSVPNKEEAVLWLWAA HNEVNQRLAGDATEDPEFPKKQFPAPESCNECYRTPVSKSENLEIEWNKD AVLGFLKNIHNPQFVSRYGVQREELLHPTADKMRQKRQISSVFTDMDMRM GMLLYAFCIVMMVLAFKLFAFKGYRKKPYGHDLLGKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11199-PA | 636 | GF11199-PA | 22..636 | 20..637 | 2607 | 76.1 | Plus |
Dana\GF18057-PA | 540 | GF18057-PA | 25..533 | 43..570 | 924 | 38.1 | Plus |
Dana\GF18056-PA | 776 | GF18056-PA | 297..766 | 82..570 | 771 | 34 | Plus |
Dana\GF18055-PA | 561 | GF18055-PA | 73..554 | 69..570 | 615 | 29.5 | Plus |
Dana\GF18056-PA | 776 | GF18056-PA | 8..272 | 310..581 | 441 | 35.3 | Plus |
Dana\GF18058-PA | 778 | GF18058-PA | 378..777 | 169..570 | 376 | 26.6 | Plus |
Dana\GF18058-PA | 778 | GF18058-PA | 28..374 | 40..342 | 243 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22509-PA | 635 | GG22509-PA | 1..635 | 1..637 | 3110 | 89.2 | Plus |
Dere\GG11096-PA | 553 | GG11096-PA | 34..546 | 43..570 | 929 | 36.5 | Plus |
Dere\GG11095-PA | 564 | GG11095-PA | 48..544 | 57..566 | 838 | 34.5 | Plus |
Dere\GG11219-PA | 560 | GG11219-PA | 23..549 | 44..570 | 644 | 29.3 | Plus |
Dere\GG22623-PA | 489 | GG22623-PA | 24..102 | 51..131 | 156 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20280-PA | 643 | GH20280-PA | 10..643 | 7..637 | 2270 | 65.5 | Plus |
Dgri\GH20920-PA | 559 | GH20920-PA | 31..552 | 44..570 | 894 | 36.5 | Plus |
Dgri\GH16892-PA | 493 | GH16892-PA | 25..120 | 51..152 | 159 | 35.3 | Plus |
Dgri\GH20405-PA | 489 | GH20405-PA | 24..102 | 51..131 | 155 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Qsox1-PB | 637 | CG4670-PB | 1..637 | 1..637 | 3361 | 100 | Plus |
Qsox1-PA | 637 | CG4670-PA | 1..637 | 1..637 | 3361 | 100 | Plus |
Qsox2-PA | 552 | CG17843-PA | 35..545 | 44..570 | 865 | 35.8 | Plus |
Qsox3-PA | 562 | CG6690-PA | 25..540 | 32..566 | 765 | 32.2 | Plus |
Qsox4-PA | 561 | CG31413-PA | 27..553 | 44..570 | 625 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19451-PA | 646 | GI19451-PA | 11..646 | 7..637 | 2390 | 67.4 | Plus |
Dmoj\GI10722-PA | 545 | GI10722-PA | 23..538 | 44..570 | 926 | 36.7 | Plus |
Dmoj\GI12238-PA | 493 | GI12238-PA | 25..107 | 51..136 | 165 | 38.4 | Plus |
Dmoj\GI15325-PA | 406 | GI15325-PA | 135..249 | 14..136 | 160 | 33.3 | Plus |
Dmoj\GI19593-PA | 488 | GI19593-PA | 23..101 | 51..131 | 157 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10907-PA | 638 | GL10907-PA | 1..638 | 1..637 | 2629 | 74.1 | Plus |
Dper\GL20935-PA | 542 | GL20935-PA | 5..538 | 24..569 | 985 | 38.6 | Plus |
Dper\GL23804-PA | 554 | GL23804-PA | 22..547 | 29..570 | 835 | 35.5 | Plus |
Dper\GL25779-PA | 493 | GL25779-PA | 26..121 | 51..152 | 160 | 35.3 | Plus |
Dper\GL15145-PA | 387 | GL15145-PA | 224..353 | 17..130 | 154 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18343-PA | 638 | GA18343-PA | 1..638 | 1..637 | 2629 | 74.1 | Plus |
Dpse\GA28634-PA | 548 | GA28634-PA | 21..544 | 29..569 | 991 | 38.9 | Plus |
Dpse\GA27058-PA | 559 | GA27058-PA | 21..552 | 29..570 | 936 | 37.7 | Plus |
Dpse\GA20009-PA | 493 | GA20009-PA | 26..121 | 51..152 | 160 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20295-PA | 636 | GM20295-PA | 1..636 | 1..637 | 3340 | 96.5 | Plus |
Dsec\GM26387-PA | 564 | GM26387-PA | 35..541 | 44..566 | 796 | 32.6 | Plus |
Dsec\GM26521-PA | 561 | GM26521-PA | 27..553 | 44..570 | 654 | 29.6 | Plus |
Dsec\GM26712-PA | 561 | GM26712-PA | 27..553 | 44..570 | 654 | 29.6 | Plus |
Dsec\GM26388-PA | 174 | GM26388-PA | 34..169 | 43..184 | 239 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25776-PA | 636 | GD25776-PA | 1..636 | 1..637 | 3357 | 97.2 | Plus |
Dsim\GD20911-PA | 552 | GD20911-PA | 34..545 | 43..570 | 900 | 35.9 | Plus |
Dsim\GD20910-PA | 564 | GD20910-PA | 35..541 | 44..566 | 809 | 33 | Plus |
Dsim\GD21029-PA | 561 | GD21029-PA | 27..553 | 44..570 | 658 | 29.6 | Plus |
Dsim\ERp60-PA | 489 | GD25877-PA | 24..102 | 51..131 | 157 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21201-PA | 646 | GJ21201-PA | 11..646 | 6..637 | 2393 | 69.2 | Plus |
Dvir\GJ23137-PA | 548 | GJ23137-PA | 21..541 | 43..570 | 957 | 37.8 | Plus |
Dvir\GJ11469-PA | 493 | GJ11469-PA | 25..107 | 51..136 | 164 | 38.4 | Plus |
Dvir\GJ17455-PA | 438 | GJ17455-PA | 23..120 | 44..146 | 162 | 34 | Plus |
Dvir\GJ18390-PA | 489 | GJ18390-PA | 24..102 | 51..131 | 155 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14087-PA | 645 | GK14087-PA | 6..645 | 9..637 | 2325 | 66.5 | Plus |
Dwil\GK14235-PA | 232 | GK14235-PA | 7..213 | 34..246 | 291 | 30.5 | Plus |
Dwil\GK20490-PA | 497 | GK20490-PA | 27..122 | 51..152 | 161 | 34.3 | Plus |
Dwil\GK25489-PA | 415 | GK25489-PA | 153..249 | 39..136 | 159 | 35.3 | Plus |
Dwil\GK25489-PA | 415 | GK25489-PA | 312..381 | 59..130 | 154 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13379-PA | 636 | GE13379-PA | 1..636 | 1..637 | 3265 | 93.4 | Plus |
Dyak\GE10256-PA | 554 | GE10256-PA | 35..547 | 43..570 | 886 | 35.7 | Plus |
Dyak\GE10255-PA | 558 | GE10255-PA | 35..546 | 44..570 | 865 | 34.6 | Plus |
Dyak\GE10385-PA | 571 | GE10385-PA | 23..549 | 44..570 | 638 | 28.9 | Plus |
Dyak\GE19977-PA | 496 | GE19977-PA | 29..124 | 51..152 | 157 | 34.3 | Plus |
Translation from 145 to 2058
> RE62692.hyp MSATHLVILAVALLVDIASAGVPLPRYEALLKQQSPPSDPTLGLYDDGDK VIRLSVDNFNATVLDQNRGALVEFYNTYCGHCRRFAPTYKSVAEHLLPWS EVLIVAAIDCAAEENNGICRNYEVMGYPTLRYLGPGFQPGPQHYGQSLHT QDKNEIREILAGMVAAENLTSSHNNSYWPNFHYLTENDSASSLFEGLSSA TEYVAVVHEPENTTLGVEVALFMTQWPAVRVRRVIDPAVAAKFKIDPTNL PLSLVDRKGEITAYAPESTNGESYAKKLWDVLGKKNITPRPVKVHQPSAT PASKIKGQNELIDEVHRNKHFVYQADLEQAIRTVLHNEVSKVGEISGEKL LALQRFLAVLQRYNPLGANGHQLVSKLKDYVVQFNDQRLTGSQFEEELKR LEAHLSPVYSSNHFVGCVGSSPRLRGFSCSLWTLFHFMTVQAANNEETQD PLEVLQAMHGYIKNFFGCTECSEHFQAMASRRKIWSVPNKEEAVLWLWAA HNEVNQRLAGDATEDPEFPKKQFPAPESCNECYRTPVSKSENLEIEWNKD AVLGFLKNIHNPQFVSRYGVQREELLHPTADKMRQKRQISSVFTDMDMRM GMLLYAFCIVMMVLAFKLFAFKGYRKKPYGHDLLGKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4670-PB | 637 | CG4670-PB | 1..637 | 1..637 | 3361 | 100 | Plus |
CG4670-PA | 637 | CG4670-PA | 1..637 | 1..637 | 3361 | 100 | Plus |
CG17843-PA | 552 | CG17843-PA | 35..545 | 44..570 | 865 | 35.8 | Plus |
CG6690-PA | 562 | CG6690-PA | 25..540 | 32..566 | 765 | 32.2 | Plus |
CG31413-PA | 561 | CG31413-PA | 27..553 | 44..570 | 625 | 28.2 | Plus |