BDGP Sequence Production Resources |
Search the DGRC for RE62711
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 627 |
Well: | 11 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG32442-RA |
Protein status: | RE62711.pep: gold |
Sequenced Size: | 923 |
Gene | Date | Evidence |
---|---|---|
CG32442 | 2001-12-14 | Blastp of sequenced clone |
CG7186 | 2002-01-01 | Sim4 clustering to Release 2 |
CG32442 | 2008-04-29 | Release 5.5 accounting |
CG32442 | 2008-08-15 | Release 5.9 accounting |
CG32442 | 2008-12-18 | 5.12 accounting |
923 bp (923 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071557
> RE62711.complete AATCGGCTGATAGATCCAAGTGTTTGTTTTTCGGGCAGCCCAATGAAACT TTAAATGGATGCAAAATGTCCGAAAAGAAGCGATTTGTGTGCGTTAATTG TGGACACAGAGTAAAAGAACTGTTCAAGAAATACAGCAATACTATGAAAA CCACGCAATGCGACAACTGTCACCAAATCACGGATAAATACATTGAGTTC GAGGAGTTTATCATATTAATAGATGCACTGCTATTAGATTCGTGCGCCTT CCGGCACATTATATACAATGGCGACTTTAAGCTCTACTGGAAGGTTTCGC TGGTGGTGCTGCTCCTGGAATCCTTTGCGCTGTGCCGCCAAAAACTGCCC GACCCTCCGAATGCCTCTTTGCATGTCCACGAAAAGGGCTTTTACACATA TACCCTTCAAAACATGGGAGATTACATGTTCATGACTCTATTGCTGCTAA TAATCACCGCCACTCTGAGTATTGATTGGATGCAGAAAATAGGCTTTCGA AATTTTTCTTTAATTATACTCAAAGTGGTGCTGATATCCAACCTGTCCAA GTTCTTCCTTCTGCCCATTTTGGTGTGGCGAAATAACACGACCGTTTTTG GCCGGAACTTGCACCATCTTCTGGTCATGGGACATCACCTCTGCTCCCTG GTCCTCGCCTACCAGGCAGTCGGAGCCACTAGGAAGAACCTTCGATGGTG GGCTCTAACTTTGGTTGTTATAGCTTTCGCCTTCAAGGAAACCGCGAGGC AGTTTGTATCACTAGTGGTGGAGGACAATTGATTATAGAAGGCTGAAAAT AGTAAACCAAAATTTTATTTAACAAAAATATAACTCTTCAAAGACAGCAC TTTGCTCTGAAATATGTGACATGACCTAAAATAAAAAAGCAAGCTAGTTT TTTACTCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32442-RA | 1143 | CG32442-RA | 207..1116 | 1..910 | 4535 | 99.8 | Plus |
CG32442-RB | 920 | CG32442-RB | 293..920 | 280..907 | 3140 | 100 | Plus |
CG32442-RC | 966 | CG32442-RC | 351..966 | 292..907 | 3080 | 100 | Plus |
CG32442-RB | 920 | CG32442-RB | 6..286 | 1..281 | 1390 | 99.6 | Plus |
CG32442-RC | 966 | CG32442-RC | 64..344 | 1..281 | 1390 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 21517153..21517641 | 907..419 | 2445 | 100 | Minus |
chr3L | 24539361 | chr3L | 21518080..21518241 | 162..1 | 795 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 21517705..21517845 | 420..280 | 705 | 100 | Minus |
chr3L | 24539361 | chr3L | 21517901..21518020 | 281..162 | 600 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 21528215..21528706 | 910..419 | 2460 | 100 | Minus |
3L | 28110227 | 3L | 21529145..21529306 | 162..1 | 795 | 99.4 | Minus |
3L | 28110227 | 3L | 21528770..21528910 | 420..280 | 705 | 100 | Minus |
3L | 28110227 | 3L | 21528966..21529085 | 281..162 | 600 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 21521315..21521806 | 910..419 | 2460 | 100 | Minus |
3L | 28103327 | 3L | 21522245..21522406 | 162..1 | 795 | 99.3 | Minus |
3L | 28103327 | 3L | 21521870..21522010 | 420..280 | 705 | 100 | Minus |
3L | 28103327 | 3L | 21522066..21522185 | 281..162 | 600 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 2747..2820 | 734..807 | 108 | 64 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 21517153..21517639 | 421..907 | 100 | <- | Minus |
chr3L | 21517705..21517843 | 282..420 | 100 | <- | Minus |
chr3L | 21517901..21518020 | 162..281 | 100 | <- | Minus |
chr3L | 21518081..21518241 | 1..161 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32442-RA | 1..717 | 66..782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32442-RA | 1..717 | 66..782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32442-RA | 1..717 | 66..782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32442-RA | 1..717 | 66..782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32442-RA | 1..717 | 66..782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32442-RA | 1..907 | 1..907 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32442-RA | 1..907 | 1..907 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32442-RA | 28..934 | 1..907 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32442-RA | 1..907 | 1..907 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32442-RA | 28..934 | 1..907 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21528218..21528704 | 421..907 | 100 | <- | Minus |
3L | 21528770..21528908 | 282..420 | 100 | <- | Minus |
3L | 21528966..21529085 | 162..281 | 100 | <- | Minus |
3L | 21529146..21529306 | 1..161 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21528218..21528704 | 421..907 | 100 | <- | Minus |
3L | 21528770..21528908 | 282..420 | 100 | <- | Minus |
3L | 21528966..21529085 | 162..281 | 100 | <- | Minus |
3L | 21529146..21529306 | 1..161 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21528218..21528704 | 421..907 | 100 | <- | Minus |
3L | 21528770..21528908 | 282..420 | 100 | <- | Minus |
3L | 21528966..21529085 | 162..281 | 100 | <- | Minus |
3L | 21529146..21529306 | 1..161 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 21521318..21521804 | 421..907 | 100 | <- | Minus |
arm_3L | 21521870..21522008 | 282..420 | 100 | <- | Minus |
arm_3L | 21522066..21522185 | 162..281 | 100 | <- | Minus |
arm_3L | 21522246..21522406 | 1..161 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21522066..21522185 | 162..281 | 100 | <- | Minus |
3L | 21522246..21522406 | 1..161 | 99 | Minus | |
3L | 21521318..21521804 | 421..907 | 100 | <- | Minus |
3L | 21521870..21522008 | 282..420 | 100 | <- | Minus |
Translation from 2 to 781
> RE62711.hyp SADRSKCLFFGQPNETLNGCKMSEKKRFVCVNCGHRVKELFKKYSNTMKT TQCDNCHQITDKYIEFEEFIILIDALLLDSCAFRHIIYNGDFKLYWKVSL VVLLLESFALCRQKLPDPPNASLHVHEKGFYTYTLQNMGDYMFMTLLLLI ITATLSIDWMQKIGFRNFSLIILKVVLISNLSKFFLLPILVWRNNTTVFG RNLHHLLVMGHHLCSLVLAYQAVGATRKNLRWWALTLVVIAFAFKETARQ FVSLVVEDN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32442-PA | 238 | CG32442-PA | 1..238 | 22..259 | 1251 | 100 | Plus |
CG32442-PC | 121 | CG32442-PC | 1..73 | 22..94 | 393 | 98.6 | Plus |
CG32442-PB | 125 | CG32442-PB | 1..73 | 22..94 | 393 | 98.6 | Plus |
Translation from 65 to 781
> RE62711.pep MSEKKRFVCVNCGHRVKELFKKYSNTMKTTQCDNCHQITDKYIEFEEFII LIDALLLDSCAFRHIIYNGDFKLYWKVSLVVLLLESFALCRQKLPDPPNA SLHVHEKGFYTYTLQNMGDYMFMTLLLLIITATLSIDWMQKIGFRNFSLI ILKVVLISNLSKFFLLPILVWRNNTTVFGRNLHHLLVMGHHLCSLVLAYQ AVGATRKNLRWWALTLVVIAFAFKETARQFVSLVVEDN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10706-PA | 240 | GF10706-PA | 1..238 | 1..238 | 945 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13227-PA | 239 | GG13227-PA | 3..237 | 4..238 | 1124 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16742-PA | 240 | GH16742-PA | 7..236 | 5..236 | 721 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Arv1-PA | 238 | CG32442-PA | 1..238 | 1..238 | 1251 | 100 | Plus |
Arv1-PC | 121 | CG32442-PC | 1..73 | 1..73 | 393 | 98.6 | Plus |
Arv1-PB | 125 | CG32442-PB | 1..73 | 1..73 | 393 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13467-PA | 240 | GI13467-PA | 6..236 | 4..236 | 717 | 64.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11902-PA | 206 | GL11902-PA | 1..204 | 33..236 | 775 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16907-PA | 238 | GA16907-PA | 1..236 | 1..236 | 904 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22132-PA | 240 | GM22132-PA | 1..238 | 1..238 | 1161 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12111-PA | 240 | GD12111-PA | 1..238 | 1..238 | 1231 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11830-PA | 240 | GJ11830-PA | 6..236 | 4..236 | 734 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17511-PA | 240 | GK17511-PA | 7..237 | 5..237 | 806 | 69.1 | Plus |