Clone RE62779 Report

Search the DGRC for RE62779

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:627
Well:79
Vector:pFlc-1
Associated Gene/TranscriptCht4-RA
Protein status:RE62779.pep: gold
Preliminary Size:448
Sequenced Size:1489

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3986 2001-12-14 Blastp of sequenced clone
CG3986 2002-01-01 Sim4 clustering to Release 2
CG3986 2003-01-01 Sim4 clustering to Release 3
Cht4 2008-04-29 Release 5.5 accounting
Cht4 2008-08-15 Release 5.9 accounting
Cht4 2008-12-18 5.12 accounting

Clone Sequence Records

RE62779.complete Sequence

1489 bp (1489 high quality bases) assembled on 2001-12-14

GenBank Submission: AY071559

> RE62779.complete
ATTTGTTACCATTAACCTACGAAGTGCAGGATGAAGTTAGTATCGATTTG
GGCATTGGCAGCTCTTTGCCTTTGCCTTGGACAAGTGGCCAGCAGCGAGA
AGCTGCTTAACTGCTACTGGGGCACGTGGGCCAACTATCGTCCCGGAGAT
GGAAAGTTCACACCCTCCGATATCGATCCCTCCCTGTGCACCCACATCAG
CTACACCTTTTTCGGAATCAGCGATGCCGGCGAGTTCAAGTCCCTGGACA
CCTGGCTGGACATGGACGATGGTCTGGGCTTTATTAGCCAGACAATTGCT
CTGAAGCAGCGCAATCCAAACCTCAAGATTTTGGCGGTGGTTGGTGGTTG
GAATGAAGGTTCCACCAAATACTCGGCCATGGCAGCCGATCCTGCCAAGC
GTGCCACCTTCGTCTCCACTTCCCTGGCCTTCATTCAGCAGTATAGCTTT
GATGGCTTGGATTTGGATTGGGAGTACCCTGGTCAGCGCGGAGGCAGTGA
AGCGGATCGCGAGAACTTTGTTACTCTGCTGCGCGAGATTAAGGAGACCT
ACGATCAGTATGGCTTGGAGCTGGGTATTGCTGTCGGTGCGTCCGAGAAA
TCGGCCAGCATCTCATACGACATTCCGGCCATTTCGCAGCACTTGACTTT
CATTAACGTTATGACCTACGACTTCCACATGGCTCTGGATGGCTATCTGG
GTCTCAATGCTCCTCTGCCCGAAGTCGCCGAATCTATTGATTATTGGCTT
TCTCATGGTGCTCCCGCTGAGAAGCTTATCCTTGGCATTGGCTTCTATGG
CCACAGCTACCAGATGTCCGATAGCTCACAGAACTGGCCCGGTGCTGCGT
GCATTGGTCCCGGAACTGCTGGCGTCTACACGCGGGAGAACGGATTCCTG
GGCTACCACGAGATCTGCCTGAACAACTGGCAAACCGTGTTCGATCAGGA
GAACGGTGCTCCATATGCCTTCCAGGGTGATCAGTGGATCGGCTATGACA
ATCCCGAAAGCATCCAGCTGAAGATGCAGTTGGTCGAGTCCCGCAATCTG
GGTGGTGCCATGATGTGGTCCATCGAGACGGATGATTTCCGTGGTCTGTG
CGGCGAGTCCTATCCACTGCTGAAGACCATGAATCGTGCTCTTGGCAGGG
AAGTGAGTGGAGGAAGTGGCGGAGGCGGCGGCGGCGGAGGAGAAGGAAGT
GTTACTCCCGCTCCAACGGCTGCTCCCACTTCGTCACCCACTCCGGCTCC
CACTCCCGGTGGTGGAAGTGGTGGCAACGAGTGCGCCCAAGATGGTTTCT
TTGTTTTGGAAAGCGATTGCAATAAGTTCTACCAGTGCGTCGGTGGCGTC
CGTTACGACTTCCAATGCGGAGCAGGGCTGTGCTTCAATACCATTACCTT
AAATTGCGACTGGCCGTAAAATGTCGATTAAATGAATGGAATATGAAAAT
AAACAAACATGGCAATTACAAAGAAAAAAAAAAAAAAAA

RE62779.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:42:03
Subject Length Description Subject Range Query Range Score Percent Strand
Cht4-RA 1617 Cht4-RA 141..1608 3..1470 7340 100 Plus
Cht9-RA 1474 Cht9-RA 1211..1294 1047..1130 210 83.3 Plus
Cht9-RA 1474 Cht9-RA 1063..1151 899..987 190 80.8 Plus
Cht9-RA 1474 Cht9-RA 336..431 166..261 180 79.1 Plus
Cht9-RA 1474 Cht9-RA 678..745 514..581 175 83.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:29:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 16951821..16952534 1470..757 3495 99.3 Minus
chr2R 21145070 chr2R 16952854..16953125 548..277 1270 97.8 Minus
chr2R 21145070 chr2R 16952587..16952798 760..549 1030 99.1 Minus
chr2R 21145070 chr2R 16953186..16953363 278..101 845 98.3 Minus
chr2R 21145070 chr2R 16953426..16953523 100..3 460 98 Minus
chr2R 21145070 chr2R 16955419..16955571 261..109 270 78.4 Minus
chr2R 21145070 chr2R 16954491..16954722 1130..899 260 74.1 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:08:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:29:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21065383..21066096 1470..757 3570 100 Minus
2R 25286936 2R 21066416..21066687 548..277 1360 100 Minus
2R 25286936 2R 21066149..21066360 760..549 1060 100 Minus
2R 25286936 2R 21066748..21066925 278..101 890 100 Minus
2R 25286936 2R 21066989..21067086 100..3 490 100 Minus
2R 25286936 2R 21068054..21068285 1130..899 260 74.1 Minus
2R 25286936 2R 21068979..21069131 261..109 255 77.8 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:09:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 21066582..21067295 1470..757 3570 100 Minus
2R 25260384 2R 21067615..21067886 548..277 1360 100 Minus
2R 25260384 2R 21067348..21067559 760..549 1060 100 Minus
2R 25260384 2R 21067947..21068124 278..101 890 100 Minus
2R 25260384 2R 21068188..21068285 100..3 490 100 Minus
2R 25260384 2R 21069253..21069336 1130..1047 210 83.3 Minus
2R 25260384 2R 21069396..21069484 987..899 190 80.8 Minus
2R 25260384 2R 21070178..21070273 261..166 180 79.1 Minus
2R 25260384 2R 21069899..21069931 546..514 150 96.9 Minus
Blast to na_te.dros performed on 2019-03-16 19:29:19 has no hits.

RE62779.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:30:00 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 16951817..16952533 758..1473 99 <- Minus
chr2R 16952590..16952798 549..757 99 <- Minus
chr2R 16952854..16953124 278..548 97 <- Minus
chr2R 16953187..16953363 101..277 98 <- Minus
chr2R 16953426..16953524 1..100 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:29:20 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
Cht4-RA 1..1389 31..1419 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:07:38 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
Cht4-RA 1..1389 31..1419 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:29:51 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
Cht4-RA 1..1389 31..1419 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:31:57 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
Cht4-RA 1..1389 31..1419 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:33:44 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
Cht4-RA 1..1389 31..1419 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:36:16 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
Cht4-RA 2..1472 3..1472 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:07:37 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
Cht4-RA 2..1472 3..1472 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:29:51 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
Cht4-RA 2..1473 3..1473 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:31:57 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
Cht4-RA 2..1472 3..1472 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:33:44 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
Cht4-RA 2..1473 3..1473 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:30:00 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21066749..21066925 101..277 100 <- Minus
2R 21066989..21067087 1..100 99   Minus
2R 21065379..21066095 758..1473 99 <- Minus
2R 21066152..21066360 549..757 100 <- Minus
2R 21066416..21066686 278..548 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:30:00 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21066749..21066925 101..277 100 <- Minus
2R 21066989..21067087 1..100 99   Minus
2R 21065379..21066095 758..1473 99 <- Minus
2R 21066152..21066360 549..757 100 <- Minus
2R 21066416..21066686 278..548 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:30:00 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21066749..21066925 101..277 100 <- Minus
2R 21066989..21067087 1..100 99   Minus
2R 21065379..21066095 758..1473 99 <- Minus
2R 21066152..21066360 549..757 100 <- Minus
2R 21066416..21066686 278..548 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:29:51 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16952884..16953600 758..1473 99 <- Minus
arm_2R 16953657..16953865 549..757 100 <- Minus
arm_2R 16953921..16954191 278..548 100 <- Minus
arm_2R 16954254..16954430 101..277 100 <- Minus
arm_2R 16954494..16954592 1..100 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:08:44 Download gff for RE62779.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21066578..21067294 758..1473 99 <- Minus
2R 21067351..21067559 549..757 100 <- Minus
2R 21067615..21067885 278..548 100 <- Minus
2R 21067948..21068124 101..277 100 <- Minus
2R 21068188..21068286 1..100 99   Minus

RE62779.pep Sequence

Translation from 30 to 1418

> RE62779.pep
MKLVSIWALAALCLCLGQVASSEKLLNCYWGTWANYRPGDGKFTPSDIDP
SLCTHISYTFFGISDAGEFKSLDTWLDMDDGLGFISQTIALKQRNPNLKI
LAVVGGWNEGSTKYSAMAADPAKRATFVSTSLAFIQQYSFDGLDLDWEYP
GQRGGSEADRENFVTLLREIKETYDQYGLELGIAVGASEKSASISYDIPA
ISQHLTFINVMTYDFHMALDGYLGLNAPLPEVAESIDYWLSHGAPAEKLI
LGIGFYGHSYQMSDSSQNWPGAACIGPGTAGVYTRENGFLGYHEICLNNW
QTVFDQENGAPYAFQGDQWIGYDNPESIQLKMQLVESRNLGGAMMWSIET
DDFRGLCGESYPLLKTMNRALGREVSGGSGGGGGGGGEGSVTPAPTAAPT
SSPTPAPTPGGGSGGNECAQDGFFVLESDCNKFYQCVGGVRYDFQCGAGL
CFNTITLNCDWP*

RE62779.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 20:58:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12984-PA 470 GF12984-PA 19..462 21..462 1903 86 Plus
Dana\GF12983-PA 368 GF12983-PA 3..366 2..371 1259 63.2 Plus
Dana\GF11929-PA 477 GF11929-PA 32..471 28..461 964 43.3 Plus
Dana\GF19149-PA 1427 GF19149-PA 2..547 6..461 766 34.8 Plus
Dana\GF24966-PA 484 GF24966-PA 31..421 21..370 731 40.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 20:58:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20808-PA 463 GG20808-PA 1..456 1..462 2056 86.4 Plus
Dere\GG20807-PA 368 GG20807-PA 15..366 18..371 1276 65.8 Plus
Dere\GG22081-PA 476 GG22081-PA 26..470 21..461 960 44 Plus
Dere\GG18337-PA 4550 GG18337-PA 34..578 5..461 790 34.3 Plus
Dere\GG14565-PA 484 GG14565-PA 40..428 23..370 729 40.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 20:58:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20466-PA 474 GH20466-PA 1..467 1..462 1747 75 Plus
Dgri\GH20465-PA 368 GH20465-PA 16..366 19..371 1239 63.5 Plus
Dgri\GH12757-PA 458 GH12757-PA 10..452 20..461 980 44.1 Plus
Dgri\GH20529-PA 458 GH20529-PA 10..452 20..461 979 44.1 Plus
Dgri\GH11814-PA 922 GH11814-PA 25..569 5..461 754 32.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:05
Subject Length Description Subject Range Query Range Score Percent Strand
Cht4-PA 462 CG3986-PA 1..462 1..462 2513 100 Plus
Cht9-PA 368 CG10531-PA 3..366 2..371 1274 63 Plus
Cht8-PA 476 CG9357-PA 26..470 21..461 979 43.7 Plus
Cht6-PF 1367 CG43374-PF 12..556 5..461 754 34.3 Plus
Cht6-PG 1580 CG43374-PG 12..556 5..461 754 34.3 Plus
Cht6-PH 2225 CG43374-PH 12..556 5..461 754 34.3 Plus
Cht6-PI 2574 CG43374-PI 12..556 5..461 754 34.3 Plus
Cht6-PK 3703 CG43374-PK 12..556 5..461 754 34.3 Plus
Cht6-PJ 4519 CG43374-PJ 12..556 5..461 754 34.3 Plus
Cht6-PC 4611 CG43374-PC 12..556 5..461 754 34.3 Plus
Cht10-PA 2286 CG18140-PA 1404..1871 18..462 727 35.1 Plus
Cht10-PC 2286 CG18140-PC 1404..1871 18..462 727 35.1 Plus
Cht10-PB 2286 CG18140-PB 1404..1871 18..462 727 35.1 Plus
Cht2-PB 484 CG2054-PB 40..428 23..370 723 39.9 Plus
Cht2-PC 484 CG2054-PC 40..428 23..370 723 39.9 Plus
Cht2-PA 484 CG2054-PA 40..428 23..370 723 39.9 Plus
Cht7-PA 1013 CG1869-PA 562..999 28..462 709 36 Plus
Cht5-PA 595 CG9307-PA 2..449 1..409 679 33.5 Plus
Cht10-PA 2286 CG18140-PA 969..1331 28..371 673 39.1 Plus
Cht10-PC 2286 CG18140-PC 969..1331 28..371 673 39.1 Plus
Cht10-PB 2286 CG18140-PB 969..1331 28..371 673 39.1 Plus
Cht7-PA 1013 CG1869-PA 127..491 28..371 670 39.2 Plus
Cht10-PA 2286 CG18140-PA 1912..2274 28..371 661 37.1 Plus
Cht10-PC 2286 CG18140-PC 1912..2274 28..371 661 37.1 Plus
Cht10-PB 2286 CG18140-PB 1912..2274 28..371 661 37.1 Plus
Cht10-PA 2286 CG18140-PA 219..737 24..462 637 31.7 Plus
Cht10-PC 2286 CG18140-PC 219..737 24..462 637 31.7 Plus
Cht10-PB 2286 CG18140-PB 219..737 24..462 637 31.7 Plus
Cht12-PA 470 CG30293-PA 15..435 12..459 614 34.1 Plus
Idgf6-PB 452 CG5210-PB 3..450 6..371 415 28.5 Plus
Idgf6-PA 452 CG5210-PA 3..450 6..371 415 28.5 Plus
Idgf4-PC 442 CG1780-PC 1..442 1..371 403 27.7 Plus
Idgf4-PB 442 CG1780-PB 1..442 1..371 403 27.7 Plus
Idgf4-PA 442 CG1780-PA 1..442 1..371 403 27.7 Plus
Cht11-PA 432 CG3044-PA 43..404 12..357 356 28.7 Plus
Idgf2-PA 440 CG4475-PA 5..440 6..371 345 25.9 Plus
Idgf3-PD 441 CG4559-PD 4..440 5..371 341 27.7 Plus
Idgf3-PA 441 CG4559-PA 4..440 5..371 341 27.7 Plus
Idgf3-PB 441 CG4559-PB 4..440 5..371 341 27.7 Plus
Idgf3-PC 441 CG4559-PC 4..440 5..371 341 27.7 Plus
Idgf1-PA 439 CG4472-PA 24..439 26..372 303 27.9 Plus
Idgf2-PB 368 CG4475-PB 13..368 86..371 301 26.3 Plus
Idgf2-PC 368 CG4475-PC 13..368 86..371 301 26.3 Plus
Idgf5-PA 444 CG5154-PA 31..440 26..367 296 26.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 20:58:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18890-PA 368 GI18890-PA 4..366 9..371 1255 63.6 Plus
Dmoj\GI18975-PA 464 GI18975-PA 14..458 24..461 1004 45 Plus
Dmoj\GI11661-PA 2466 GI11661-PA 1562..2022 28..462 736 37 Plus
Dmoj\GI11661-PA 2466 GI11661-PA 2092..2454 28..371 724 41.1 Plus
Dmoj\GI12722-PA 1630 GI12722-PA 1179..1616 28..462 720 36.3 Plus
Dmoj\GI12777-PA 474 GI12777-PA 32..422 21..370 716 39.2 Plus
Dmoj\GI12722-PA 1630 GI12722-PA 744..1108 28..371 687 39.7 Plus
Dmoj\GI11661-PA 2466 GI11661-PA 1051..1413 28..371 660 38.3 Plus
Dmoj\GI11661-PA 2466 GI11661-PA 244..609 28..373 583 35.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 20:58:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10181-PA 450 GL10181-PA 1..443 1..462 1875 80.1 Plus
Dper\GL10180-PA 368 GL10180-PA 15..366 18..371 1283 66.1 Plus
Dper\GL10147-PA 478 GL10147-PA 8..472 4..461 967 42.4 Plus
Dper\GL20757-PA 1028 GL20757-PA 177..541 28..371 682 39.5 Plus
Dper\GL20757-PA 1028 GL20757-PA 612..969 28..371 663 38.6 Plus
Dper\GL10184-PA 469 GL10184-PA 7..434 8..459 662 33.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 20:58:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17825-PA 465 GA17825-PA 1..458 1..462 2021 83.8 Plus
Dpse\GA10376-PA 368 GA10376-PA 15..366 18..371 1283 66.1 Plus
Dpse\GA25090-PA 478 GA25090-PA 8..472 4..461 959 42.1 Plus
Dpse\GA22363-PA 2657 GA22363-PA 12..559 5..461 770 32.7 Plus
Dpse\GA15211-PA 483 GA15211-PA 37..427 21..370 722 39.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 20:58:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15755-PA 427 GM15755-PA 9..427 40..462 2014 93.6 Plus
Dsec\GM15753-PA 368 GM15753-PA 15..366 18..371 1243 64.1 Plus
Dsec\GM15800-PA 435 GM15800-PA 34..429 66..461 812 42.8 Plus
Dsec\GM14173-PA 480 GM14173-PA 36..424 23..370 710 39.9 Plus
Dsec\GM14087-PA 992 GM14087-PA 546..978 33..462 704 35.7 Plus
Dsec\GM14087-PA 992 GM14087-PA 127..491 28..371 668 39.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 20:58:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25229-PA 458 GD25229-PA 1..458 1..462 2159 94.6 Plus
Dsim\GD25228-PA 368 GD25228-PA 15..366 18..371 1246 64.4 Plus
Dsim\GD13442-PA 484 GD13442-PA 40..428 23..370 721 40.4 Plus
Dsim\GD13359-PA 1013 GD13359-PA 562..999 28..462 716 35.7 Plus
Dsim\GD13359-PA 1013 GD13359-PA 127..491 28..371 668 39.2 Plus
Dsim\GD17715-PA 878 GD17715-PA 8..445 49..462 619 33.5 Plus
Dsim\GD17715-PA 878 GD17715-PA 487..762 28..290 478 36.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 20:58:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21926-PA 464 GJ21926-PA 1..456 1..461 1848 80.1 Plus
Dvir\GJ21925-PA 368 GJ21925-PA 9..366 12..371 1260 64.4 Plus
Dvir\GJ22437-PA 469 GJ22437-PA 19..463 18..461 951 41.6 Plus
Dvir\GJ16075-PA 482 GJ16075-PA 35..425 21..370 747 40.7 Plus
Dvir\GJ18726-PA 3322 GJ18726-PA 59..438 19..371 723 38 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 20:58:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22944-PA 474 GK22944-PA 1..467 1..462 1827 75.1 Plus
Dwil\GK22943-PA 369 GK22943-PA 14..366 17..371 1252 63.7 Plus
Dwil\GK23269-PA 470 GK23269-PA 26..464 24..461 953 42.6 Plus
Dwil\GK25829-PA 4336 GK25829-PA 9..563 5..461 781 33.2 Plus
Dwil\GK17559-PA 489 GK17559-PA 40..431 21..370 704 40 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 20:58:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13748-PA 471 GE13748-PA 1..464 1..462 2090 88.6 Plus
Dyak\GE13746-PA 368 GE13746-PA 15..366 18..371 1244 63.8 Plus
Dyak\GE12162-PA 476 GE12162-PA 26..470 21..461 984 44.1 Plus
Dyak\GE20919-PA 484 GE20919-PA 40..428 23..370 718 39.8 Plus
Dyak\GE26461-PA 1013 GE21672-PA 562..999 28..462 716 35.7 Plus
Dyak\GE26461-PA 1013 GE21672-PA 127..491 28..371 663 38.9 Plus

RE62779.hyp Sequence

Translation from 30 to 1418

> RE62779.hyp
MKLVSIWALAALCLCLGQVASSEKLLNCYWGTWANYRPGDGKFTPSDIDP
SLCTHISYTFFGISDAGEFKSLDTWLDMDDGLGFISQTIALKQRNPNLKI
LAVVGGWNEGSTKYSAMAADPAKRATFVSTSLAFIQQYSFDGLDLDWEYP
GQRGGSEADRENFVTLLREIKETYDQYGLELGIAVGASEKSASISYDIPA
ISQHLTFINVMTYDFHMALDGYLGLNAPLPEVAESIDYWLSHGAPAEKLI
LGIGFYGHSYQMSDSSQNWPGAACIGPGTAGVYTRENGFLGYHEICLNNW
QTVFDQENGAPYAFQGDQWIGYDNPESIQLKMQLVESRNLGGAMMWSIET
DDFRGLCGESYPLLKTMNRALGREVSGGSGGGGGGGGEGSVTPAPTAAPT
SSPTPAPTPGGGSGGNECAQDGFFVLESDCNKFYQCVGGVRYDFQCGAGL
CFNTITLNCDWP*

RE62779.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:12:46
Subject Length Description Subject Range Query Range Score Percent Strand
Cht4-PA 462 CG3986-PA 1..462 1..462 2513 100 Plus
Cht9-PA 368 CG10531-PA 3..366 2..371 1274 63 Plus
Cht8-PA 476 CG9357-PA 26..470 21..461 979 43.7 Plus
Cht2-PB 484 CG2054-PB 40..428 23..370 723 39.9 Plus
Cht2-PC 484 CG2054-PC 40..428 23..370 723 39.9 Plus