BDGP Sequence Production Resources |
Search the DGRC for RE62785
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 627 |
Well: | 85 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG12134-RA |
Protein status: | RE62785.pep: gold |
Preliminary Size: | 1422 |
Sequenced Size: | 1532 |
Gene | Date | Evidence |
---|---|---|
CG12134 | 2001-12-14 | Blastp of sequenced clone |
CG12134 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12134 | 2008-04-29 | Release 5.5 accounting |
CG12134 | 2008-08-15 | Release 5.9 accounting |
CG12134 | 2008-12-18 | 5.12 accounting |
1532 bp (1532 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071560
> RE62785.complete AGGGGTGGTGTGTGACTTGGCTTCAAAATCATATTATTGAAGTAGTTAAA AATAAATTCAGTTGTCGAATAAGTGGATTTCGTCATAAAAGAAAGAGTGC TGACGCATTTGAAGTGCACTCTTATCCCTTTCAACTCGTCTATTAAGTAT TCAATGTGTCTTCAGCCCAAGTTAGCTTAAATCTAGCTGAATAGTCAGCA CTGTCGTCATTTAATGCACGTGCGGCAAATTAAAAATAGACAAGAATGAG CGACTTTAACAAATATTGCGAAGAAGCTGCGAGGGAAGCGCTTCCGGACT CGGAAGACGAGGAAGACATCGGCGATGAGGACACTTGTAGCGCACAGGAT CTTGCCGCCGAATTCCAGCTGAAGTACAAGCCGCAGGACGAAGTCAGTGT GTCCTTGCAGCGTGAATATGTTCTTAGCCTGGCCGCAGATCAAGGATTCT CACGGATGGCCGCCGGACTGTCCAATTCAGCAGTGCATATCTATAATTTG GATTCGGGCGCCGGGAAACTGGAGAACTTTAGCTATCTGCCGCCCACAGA TTCGCCGCAGAGCGTAAGCATCTGTGGCGTTCGTTTCCTCGACGAAGGAC CACACAACATCCTGGTCGGCACCACCGATGGCTACGTGCGCCTCTACGAT CTGCGGCTAAGAGGCGAACAGGCGCGGTTCAAGTACACGCAGCACCCTAA TGTGCCTCCGGTGCCCAAATCGCTTTCGTGCTTCGACAGAAACGCCAACG GTCGGATTATTTGCTGCGGCACCGAACAGTTTCACAGCAACGCGTTCCTC GTGTTCTTCGATGTTCGGGAGCGCCAGCAAATGGGCGTCTACTTCGAAAG CCATGAGGACGATATCACCTCGTTGCGGTTCCATGCCCAGAATCCAGACC TTCTGGCCACGGGCAGTGTGGACGGGCTAGTAAACGTGTTCGATGTGAAG GAGCCGGACGAGGATGAAGCACTGCTTAACACCTTCAACACGGAGAGCAG TGTGGCCCGGTTGGCGTGGCACAGAAACGTCTACGACAAGGACATCATAT CCTGCGTCACGACCACTGGCGATTTCAAGAGCTACGAGTGCGAGGAGGGC GACGAGGTGGCATCCTTCGAGCGGCCGGATGTTACGGCGGCAATAAGGAG AAAAAAAGCCGCAAACTTCAACCTGATAAATGCCCACAATCAGGAAGACG GAGGAGTCTTTCTGTTGGCGGGCACCAACTTCAACAAGGGCGAGATCCTG CGCTCCGTTAGCGTTACCTCGAAGAACAGCCTCCAGCCATTGGCCAATTT CCAGGGAAACAAGCAGATCGTCAGAGATAGTCTTTTCGATTCAAAGAGAA GTTTACTTTTTACAGGCGGAGAATCCGGCATTGTTACGGTTTGGGCACAG GACGCAAGTGGAACGGCGTTCAGCAGTGAAAAACTGAAGGCCAGGAAGGA GAAGAAATCACGCAAGCAAGCGCCATATTAAATGTGTATTTATGTTTTAA ATAAAGGTTTTCTAAATAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12134-RA | 1533 | CG12134-RA | 9..1526 | 1..1518 | 7575 | 99.9 | Plus |
CG12134.b | 1501 | CG12134.b | 1..1489 | 27..1518 | 7390 | 99.7 | Plus |
CG12134-RB | 1588 | CG12134-RB | 330..1576 | 272..1518 | 6235 | 100 | Plus |
CG12134-RB | 1588 | CG12134-RB | 4..276 | 1..273 | 1350 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5858992..5859960 | 272..1240 | 4770 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 5860017..5860294 | 1240..1517 | 1375 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 5858667..5858938 | 1..273 | 1285 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 9971475..9972443 | 272..1240 | 4845 | 100 | Plus |
2R | 25286936 | 2R | 9972500..9972778 | 1240..1518 | 1395 | 100 | Plus |
2R | 25286936 | 2R | 9971149..9971421 | 1..273 | 1350 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 9972674..9973642 | 272..1240 | 4845 | 100 | Plus |
2R | 25260384 | 2R | 9973699..9973977 | 1240..1518 | 1395 | 100 | Plus |
2R | 25260384 | 2R | 9972348..9972620 | 1..273 | 1350 | 99.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5860018..5860294 | 1241..1517 | 99 | Plus | |
chr2R | 5858667..5858938 | 1..273 | 98 | -> | Plus |
chr2R | 5858994..5859960 | 274..1240 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12134-RA | 1..1236 | 246..1481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12134-RA | 1..1236 | 246..1481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12134-RA | 1..1236 | 246..1481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12134-RA | 1..1236 | 246..1481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12134-RA | 1..1236 | 246..1481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12134-RA | 1..1517 | 1..1517 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12134-RA | 1..1517 | 1..1517 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12134-RA | 7..1523 | 1..1517 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12134-RA | 1..1517 | 1..1517 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12134-RA | 7..1523 | 1..1517 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9972501..9972777 | 1241..1517 | 100 | Plus | |
2R | 9971149..9971421 | 1..273 | 99 | -> | Plus |
2R | 9971477..9972443 | 274..1240 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9972501..9972777 | 1241..1517 | 100 | Plus | |
2R | 9971149..9971421 | 1..273 | 99 | -> | Plus |
2R | 9971477..9972443 | 274..1240 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9972501..9972777 | 1241..1517 | 100 | Plus | |
2R | 9971149..9971421 | 1..273 | 99 | -> | Plus |
2R | 9971477..9972443 | 274..1240 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5858654..5858926 | 1..273 | 99 | -> | Plus |
arm_2R | 5858982..5859948 | 274..1240 | 100 | -> | Plus |
arm_2R | 5860006..5860282 | 1241..1517 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9972348..9972620 | 1..273 | 99 | -> | Plus |
2R | 9972676..9973642 | 274..1240 | 100 | -> | Plus |
2R | 9973700..9973976 | 1241..1517 | 100 | Plus |
Translation from 245 to 1480
> RE62785.pep MSDFNKYCEEAAREALPDSEDEEDIGDEDTCSAQDLAAEFQLKYKPQDEV SVSLQREYVLSLAADQGFSRMAAGLSNSAVHIYNLDSGAGKLENFSYLPP TDSPQSVSICGVRFLDEGPHNILVGTTDGYVRLYDLRLRGEQARFKYTQH PNVPPVPKSLSCFDRNANGRIICCGTEQFHSNAFLVFFDVRERQQMGVYF ESHEDDITSLRFHAQNPDLLATGSVDGLVNVFDVKEPDEDEALLNTFNTE SSVARLAWHRNVYDKDIISCVTTTGDFKSYECEEGDEVASFERPDVTAAI RRKKAANFNLINAHNQEDGGVFLLAGTNFNKGEILRSVSVTSKNSLQPLA NFQGNKQIVRDSLFDSKRSLLFTGGESGIVTVWAQDASGTAFSSEKLKAR KEKKSRKQAPY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13567-PA | 412 | GF13567-PA | 1..412 | 1..411 | 1477 | 70.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24125-PA | 411 | GG24125-PA | 1..411 | 1..411 | 2009 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20350-PA | 252 | GH20350-PA | 1..252 | 160..411 | 930 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12134-PA | 411 | CG12134-PA | 1..411 | 1..411 | 2136 | 100 | Plus |
CG12134-PB | 341 | CG12134-PB | 1..341 | 71..411 | 1778 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14544-PA | 411 | GI14544-PA | 4..411 | 5..411 | 1084 | 52 | Plus |
Dmoj\GI20019-PA | 411 | GI20019-PA | 4..411 | 5..411 | 1084 | 52 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16766-PA | 411 | GL16766-PA | 1..411 | 1..411 | 1503 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11428-PA | 411 | GA11428-PA | 1..411 | 1..411 | 1494 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11121-PA | 411 | GM11121-PA | 1..411 | 1..411 | 2153 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10705-PA | 411 | GD10705-PA | 1..411 | 1..411 | 2152 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21267-PA | 417 | GJ21267-PA | 8..417 | 7..411 | 1349 | 63.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21663-PA | 410 | GK21663-PA | 3..410 | 2..411 | 1294 | 59.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19321-PA | 411 | GE19321-PA | 1..411 | 1..411 | 1998 | 92.9 | Plus |
Translation from 245 to 1480
> RE62785.hyp MSDFNKYCEEAAREALPDSEDEEDIGDEDTCSAQDLAAEFQLKYKPQDEV SVSLQREYVLSLAADQGFSRMAAGLSNSAVHIYNLDSGAGKLENFSYLPP TDSPQSVSICGVRFLDEGPHNILVGTTDGYVRLYDLRLRGEQARFKYTQH PNVPPVPKSLSCFDRNANGRIICCGTEQFHSNAFLVFFDVRERQQMGVYF ESHEDDITSLRFHAQNPDLLATGSVDGLVNVFDVKEPDEDEALLNTFNTE SSVARLAWHRNVYDKDIISCVTTTGDFKSYECEEGDEVASFERPDVTAAI RRKKAANFNLINAHNQEDGGVFLLAGTNFNKGEILRSVSVTSKNSLQPLA NFQGNKQIVRDSLFDSKRSLLFTGGESGIVTVWAQDASGTAFSSEKLKAR KEKKSRKQAPY*