BDGP Sequence Production Resources |
Search the DGRC for RE62833
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 628 |
Well: | 33 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG6638-RA |
Protein status: | RE62833.pep: gold |
Preliminary Size: | 1316 |
Sequenced Size: | 1527 |
Gene | Date | Evidence |
---|---|---|
CG6638 | 2001-12-14 | Blastp of sequenced clone |
CG6638 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6638 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6638 | 2008-04-29 | Release 5.5 accounting |
CG6638 | 2008-08-15 | Release 5.9 accounting |
CG6638 | 2008-12-18 | 5.12 accounting |
1527 bp (1527 high quality bases) assembled on 2001-12-14
GenBank Submission: AY089640
> RE62833.complete AGTGGATTCCGCAGTAGCGAGTGCTAACAGCTGATCGCAATTAGATAATA GTATAGAATAGTAAACCCCAAAATCATCATGGCTCTGAGATTTGTGGCCC AGTCATGCAGATCCTTGCTGCAACGTGGCGATCGTCCTTTGTCTTGGACC CGTACCCTCGCCCATTATCCCGTCAACGATGCGATGTTCGGTCTGGATGA GGATCGCCAAAAGCTGCGGGAAGTCGCCTTCAATTTCTTTCAGAAGGAAT TGGCGCCTCTGGCCAAGGAAATCGACAAATTGGATAATTTCAAGGACATG CGCCCCTTCTGGAAGAAACTAGGTGCTCTTGGCTTTTTGGGCATCACGGC GGAGCCAGATTTTGGTGGCACTGGGGGCAGCTATTTGGACCACTGCATCA TCATGGAGGAATTCTCCCGTGCTGCTGGTGGCGTGGCCTTGTCGTACGGA GCACACTCCAATCTGTGCATCAATCAGCTGACAAAGAACGGCACCCCCGA GCAGAAGGAGAAGTACCTTCCCAAGCTGTGCAGTGGTGAGCATGTTGGAG GTCTGGCCATGTCCGAACCGGGCGCTGGATCCGATGTCGTATCCATGAAG CTGCGTGCGGAGCGCAAGGGAGACTACTATGTCCTGAATGGATCAAAATT CTGGATCACAAATGGATCTGATGCGGATACCTTGATAGTCTATGCCAAGA CAGGAGGCAGCGGTGTTCCGGACAAGCACGGCATTACCGCTTTCATAGTC GAAACCGCCTGGGAAGGATTCAGTGTGGCCCAAAAGCTGGACAAGTTGGG CATGCGAGGCAGCAGTACCTGTGAGCTGGTCTTCCAGGATCTGAAGGTGC CGGCCAAGAATATTCTGGGCCAGGAGAACAGGGGCGTCTATGTGCTCATG TCGGGATTGGACTTTGAACGACTAGTGCTGGCCGCCGGACCCGTGGGTCT GATGCAGGCCGCTTGCGACGTGGCTTTCGACTATGCCCACCAGCGCAAGC AGATGAACAAGTTAATTGGAGAATTCCAGTTGCTGCAAGGAAAGATGGCC GATATGTACACCACACTGAGTGCGTGCAGGAGCTATTTGTACACGGTGGC CAGATCCTGTGACGCCGGCAATCGCAGTCCCAAAGATTGTGCTGGCGTTA TTCTCTACACCGCCGAGAAAGCCACCAAGGTGGCGCTCGATGCCATTCAG ATCCTAGGTGGCAATGGCTACATTAACGAGAATCCCACTGGTCGCATCCT GCGAGATGCTAAACTATACGAGATTGGCGCAGGAACCTCCGAGATCAGAC GCTGGCTGATTGGTCGCCAGCTCAACCAGGAGTACAAGTGAAGAGAGAGC GCCATCTCTTTTTCCAATGTGGCAATAACGTGGACCAACTCTACTACCTG ACAGACTAAATGTTGCATTTATTTTTTGAAGATTTGTAAAATCTGTATGT TTTATCAATGTCTATATGTATATGTATGTGCCTTAATAAAAGAAGTAAAA CTTTATATGCTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6638-RA | 1760 | CG6638-RA | 21..1535 | 1..1515 | 7545 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 8566430..8567520 | 1509..419 | 5410 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 8567803..8568096 | 294..1 | 1425 | 99 | Minus |
chr3L | 24539361 | chr3L | 8567622..8567747 | 419..294 | 630 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 8574401..8575497 | 1515..419 | 5470 | 99.9 | Minus |
3L | 28110227 | 3L | 8575780..8576073 | 294..1 | 1455 | 99.7 | Minus |
3L | 28110227 | 3L | 8575599..8575724 | 419..294 | 630 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 8567501..8568597 | 1515..419 | 5470 | 99.9 | Minus |
3L | 28103327 | 3L | 8568880..8569173 | 294..1 | 1455 | 99.6 | Minus |
3L | 28103327 | 3L | 8568699..8568824 | 419..294 | 630 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 8566438..8567519 | 420..1501 | 99 | <- | Minus |
chr3L | 8567622..8567747 | 294..419 | 100 | <- | Minus |
chr3L | 8567804..8568096 | 1..293 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6638-RA | 1..1263 | 79..1341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6638-RA | 1..1263 | 79..1341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6638-RA | 1..1263 | 79..1341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6638-RA | 1..1263 | 79..1341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6638-RA | 1..1263 | 79..1341 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6638-RA | 1..1510 | 1..1511 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6638-RA | 1..1509 | 1..1509 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6638-RA | 6..1514 | 1..1509 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6638-RA | 1..1510 | 1..1511 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6638-RA | 6..1514 | 1..1509 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8575599..8575724 | 294..419 | 100 | <- | Minus |
3L | 8574405..8575496 | 420..1511 | 99 | <- | Minus |
3L | 8575781..8576073 | 1..293 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8575599..8575724 | 294..419 | 100 | <- | Minus |
3L | 8574405..8575496 | 420..1511 | 99 | <- | Minus |
3L | 8575781..8576073 | 1..293 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8575599..8575724 | 294..419 | 100 | <- | Minus |
3L | 8574405..8575496 | 420..1511 | 99 | <- | Minus |
3L | 8575781..8576073 | 1..293 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 8567505..8568596 | 420..1511 | 99 | <- | Minus |
arm_3L | 8568699..8568824 | 294..419 | 100 | <- | Minus |
arm_3L | 8568881..8569173 | 1..293 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8567505..8568596 | 420..1511 | 99 | <- | Minus |
3L | 8568699..8568824 | 294..419 | 100 | <- | Minus |
3L | 8568881..8569173 | 1..293 | 99 | Minus |
Translation from 78 to 1340
> RE62833.pep MALRFVAQSCRSLLQRGDRPLSWTRTLAHYPVNDAMFGLDEDRQKLREVA FNFFQKELAPLAKEIDKLDNFKDMRPFWKKLGALGFLGITAEPDFGGTGG SYLDHCIIMEEFSRAAGGVALSYGAHSNLCINQLTKNGTPEQKEKYLPKL CSGEHVGGLAMSEPGAGSDVVSMKLRAERKGDYYVLNGSKFWITNGSDAD TLIVYAKTGGSGVPDKHGITAFIVETAWEGFSVAQKLDKLGMRGSSTCEL VFQDLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGLMQAACDVAF DYAHQRKQMNKLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCDAGNRS PKDCAGVILYTAEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIG AGTSEIRRWLIGRQLNQEYK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10158-PA | 419 | GF10158-PA | 1..419 | 1..420 | 2152 | 96.2 | Plus |
Dana\GF17623-PA | 405 | GF17623-PA | 7..403 | 19..419 | 620 | 36.1 | Plus |
Dana\GF17739-PA | 418 | GF17739-PA | 40..414 | 39..418 | 589 | 36.5 | Plus |
Dana\GF10656-PA | 420 | GF10656-PA | 31..416 | 33..420 | 582 | 35.7 | Plus |
Dana\GF10801-PA | 415 | GF10801-PA | 38..413 | 39..419 | 533 | 33.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15072-PA | 420 | GG15072-PA | 1..420 | 1..420 | 2228 | 99 | Plus |
Dere\Arc42-PA | 405 | GG23560-PA | 23..403 | 35..419 | 626 | 37.6 | Plus |
Dere\GG14445-PA | 419 | GG14445-PA | 25..416 | 27..420 | 587 | 35.9 | Plus |
Dere\GG17152-PA | 415 | GG17152-PA | 34..415 | 36..418 | 582 | 35.8 | Plus |
Dere\GG13447-PA | 414 | GG13447-PA | 37..412 | 39..419 | 551 | 33.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22516-PA | 424 | GH22516-PA | 1..424 | 1..420 | 2007 | 87.5 | Plus |
Dgri\GH16400-PA | 406 | GH16400-PA | 7..404 | 19..419 | 629 | 37 | Plus |
Dgri\GH14704-PA | 419 | GH14704-PA | 24..415 | 27..420 | 583 | 35.4 | Plus |
Dgri\GH16965-PA | 414 | GH16965-PA | 37..411 | 39..418 | 542 | 34 | Plus |
Dgri\GH15455-PA | 336 | GH15455-PA | 1..326 | 84..411 | 509 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6638-PA | 420 | CG6638-PA | 1..420 | 1..420 | 2195 | 100 | Plus |
Arc42-PA | 405 | CG4703-PA | 23..403 | 35..419 | 623 | 37.6 | Plus |
CG4860-PA | 415 | CG4860-PA | 37..411 | 39..418 | 589 | 37 | Plus |
CG12262-PA | 419 | CG12262-PA | 25..416 | 27..420 | 577 | 35.9 | Plus |
CG3902-PA | 414 | CG3902-PA | 37..412 | 39..419 | 548 | 33.3 | Plus |
CG7461-PC | 627 | CG7461-PC | 109..445 | 81..411 | 500 | 35.4 | Plus |
CG7461-PB | 627 | CG7461-PB | 109..445 | 81..411 | 500 | 35.4 | Plus |
CG9547-PA | 419 | CG9547-PA | 41..411 | 39..415 | 346 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12421-PA | 421 | GI12421-PA | 1..421 | 1..420 | 2029 | 88.9 | Plus |
Dmoj\GI22432-PA | 406 | GI22432-PA | 9..404 | 21..419 | 612 | 36.9 | Plus |
Dmoj\GI12250-PA | 420 | GI12250-PA | 24..415 | 27..420 | 591 | 35.4 | Plus |
Dmoj\GI22465-PA | 407 | GI22465-PA | 5..397 | 10..411 | 569 | 35.4 | Plus |
Dmoj\GI11829-PA | 414 | GI11829-PA | 8..412 | 1..419 | 549 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10298-PA | 420 | GL10298-PA | 1..420 | 1..420 | 2130 | 94 | Plus |
Dper\GL12205-PA | 405 | GL12205-PA | 7..403 | 11..419 | 640 | 37 | Plus |
Dper\GL25095-PA | 419 | GL25095-PA | 31..416 | 33..420 | 576 | 35.7 | Plus |
Dper\GL21568-PA | 413 | GL21568-PA | 31..409 | 35..418 | 573 | 35.2 | Plus |
Dper\GL25250-PA | 415 | GL25250-PA | 38..413 | 39..419 | 556 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19744-PA | 420 | GA19744-PA | 1..420 | 1..420 | 2130 | 94 | Plus |
Dpse\Arc42-PA | 405 | GA18369-PA | 7..403 | 11..419 | 640 | 37 | Plus |
Dpse\GA11516-PA | 419 | GA11516-PA | 31..416 | 33..420 | 576 | 35.7 | Plus |
Dpse\GA18485-PA | 411 | GA18485-PA | 29..407 | 35..418 | 574 | 35.7 | Plus |
Dpse\GA17761-PA | 415 | GA17761-PA | 38..413 | 39..419 | 556 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24928-PA | 420 | GM24928-PA | 1..420 | 1..420 | 2230 | 98.8 | Plus |
Dsec\GM26869-PA | 405 | GM26869-PA | 7..403 | 19..419 | 630 | 36.8 | Plus |
Dsec\GM26034-PA | 420 | GM26034-PA | 34..420 | 36..418 | 593 | 36.2 | Plus |
Dsec\GM24997-PA | 419 | GM24997-PA | 25..416 | 27..420 | 589 | 36.2 | Plus |
Dsec\GM21947-PA | 627 | GM21947-PA | 112..446 | 84..412 | 499 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12977-PA | 420 | GD12977-PA | 1..420 | 1..420 | 2239 | 99.3 | Plus |
Dsim\GD19319-PA | 405 | GD19319-PA | 7..403 | 19..419 | 631 | 37.1 | Plus |
Dsim\GD20592-PA | 415 | GD20592-PA | 34..411 | 36..418 | 597 | 36.6 | Plus |
Dsim\GD14030-PA | 439 | GD14030-PA | 25..411 | 27..415 | 587 | 36.4 | Plus |
Dsim\GD12323-PA | 420 | GD12323-PA | 37..418 | 39..419 | 547 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12313-PA | 424 | GJ12313-PA | 1..424 | 1..420 | 2035 | 88.7 | Plus |
Dvir\GJ12315-PA | 347 | GJ12315-PA | 1..347 | 74..420 | 1498 | 78.1 | Plus |
Dvir\GJ10995-PA | 406 | GJ10995-PA | 6..404 | 18..419 | 620 | 36.1 | Plus |
Dvir\GJ11482-PA | 420 | GJ11482-PA | 13..415 | 19..420 | 586 | 35.5 | Plus |
Dvir\GJ19560-PA | 420 | GJ19560-PA | 13..415 | 19..420 | 586 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20558-PA | 423 | GK20558-PA | 1..423 | 1..420 | 2015 | 88.7 | Plus |
Dwil\Arc42-PA | 405 | GK22361-PA | 23..403 | 35..419 | 652 | 38.3 | Plus |
Dwil\GK11564-PA | 384 | GK11564-PA | 5..382 | 39..419 | 594 | 36 | Plus |
Dwil\GK23895-PA | 420 | GK23895-PA | 13..415 | 19..420 | 580 | 35.2 | Plus |
Dwil\GK20439-PA | 417 | GK20439-PA | 37..415 | 39..419 | 545 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21295-PA | 420 | GE21295-PA | 1..420 | 1..420 | 2204 | 97.6 | Plus |
Dyak\GE25631-PA | 405 | GE25631-PA | 7..403 | 19..419 | 627 | 37.3 | Plus |
Dyak\GE24541-PA | 415 | GE24541-PA | 34..415 | 36..418 | 587 | 36.1 | Plus |
Dyak\GE21636-PA | 419 | GE21636-PA | 25..416 | 27..420 | 587 | 35.9 | Plus |
Dyak\GE22549-PA | 414 | GE22549-PA | 37..412 | 39..419 | 548 | 33.4 | Plus |
Translation from 78 to 1340
> RE62833.hyp MALRFVAQSCRSLLQRGDRPLSWTRTLAHYPVNDAMFGLDEDRQKLREVA FNFFQKELAPLAKEIDKLDNFKDMRPFWKKLGALGFLGITAEPDFGGTGG SYLDHCIIMEEFSRAAGGVALSYGAHSNLCINQLTKNGTPEQKEKYLPKL CSGEHVGGLAMSEPGAGSDVVSMKLRAERKGDYYVLNGSKFWITNGSDAD TLIVYAKTGGSGVPDKHGITAFIVETAWEGFSVAQKLDKLGMRGSSTCEL VFQDLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGLMQAACDVAF DYAHQRKQMNKLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCDAGNRS PKDCAGVILYTAEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIG AGTSEIRRWLIGRQLNQEYK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6638-PA | 420 | CG6638-PA | 1..420 | 1..420 | 2195 | 100 | Plus |
Arc42-PA | 405 | CG4703-PA | 23..403 | 35..419 | 623 | 37.6 | Plus |
CG4860-PA | 415 | CG4860-PA | 37..411 | 39..418 | 589 | 37 | Plus |
CG12262-PA | 419 | CG12262-PA | 25..416 | 27..420 | 577 | 35.9 | Plus |
CG3902-PA | 414 | CG3902-PA | 37..412 | 39..419 | 548 | 33.3 | Plus |