BDGP Sequence Production Resources |
Search the DGRC for RE63284
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 632 |
Well: | 84 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG18081-RA |
Protein status: | RE63284.pep: gold |
Preliminary Size: | 234 |
Sequenced Size: | 735 |
Gene | Date | Evidence |
---|---|---|
CG18081 | 2001-12-14 | Blastp of sequenced clone |
CG18081 | 2002-01-01 | Sim4 clustering to Release 2 |
CG18081 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18081 | 2008-04-29 | Release 5.5 accounting |
CG18081 | 2008-08-15 | Release 5.9 accounting |
CG18081 | 2008-12-18 | 5.12 accounting |
735 bp (735 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071570
> RE63284.complete ATCGTTCAGCTCTGGTCCCATTTAATCCTGGCAGCGAAACAAAACCCGAC AAATTGATACAAATTTACGGTTAATCGTTAATAATTTCGGGTAAAAAATC AAAACAGTTTGTAACAACGAATTTTACGTAACTGCAAAGGCTGCATCACA CCTGCATTTAGTACAGCCAACCAAATTTAATCGGGTTAATTAGCAAGAAA TGGCACGTGGACACCAGAAGATCCAGTCGCAGGCGAAGGCCTCCGAGAAG CAGGCCAAACTAAAGAAGCAACAAGGACACAGTGCCAACGACCAGAAGAA GGCGGCCCAGAAGGCACTTGTCTATGTGTGCGCCGTTTGCAAGTCGCAAA TGCCCGATCCGAAGACTTACAAGCAGCATTTCGAGAACAAGCATCCCAAG AATGACATGCCCGATGAGCTGAAGGAGGTCTGATGACCGATGTGGCTGCG TGCATATATAAATATATCAAGCTGATCGAAATCGACGAATTTCCTACCAG TACGAAACTTTTGAAACAATAACTTTACAACAGCCCCGACAAAACAAACA TCAACATTTAAGTCGATGAGAGGAGGGCGCGTAAAGTTAGAACATAGTTT CCAAAGCTAAGGGCCCAGCTGAATTTTTTATATACACACTGCTGACTTTT GGTTTATACTTTGAAAATAACACATATGGCTACCACAACAATACAAAGAA AATTTACACATAGTAAAATAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 15823903..15824280 | 719..342 | 1890 | 100 | Minus |
chr3L | 24539361 | chr3L | 15825021..15825210 | 193..4 | 920 | 98.9 | Minus |
chr3L | 24539361 | chr3L | 15824561..15824712 | 343..192 | 745 | 99.3 | Minus |
chr3L | 24539361 | chr3L | 15826610..15826761 | 343..192 | 715 | 98 | Minus |
chr3L | 24539361 | chr3L | 15825986..15826080 | 436..342 | 370 | 92.6 | Minus |
chr3L | 24539361 | chr3L | 15825906..15825973 | 536..469 | 190 | 85.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 15834073..15834453 | 722..342 | 1905 | 100 | Minus |
3L | 28110227 | 3L | 15835194..15835383 | 193..4 | 950 | 100 | Minus |
3L | 28110227 | 3L | 15834734..15834885 | 343..192 | 760 | 100 | Minus |
3L | 28110227 | 3L | 15836780..15836931 | 343..192 | 730 | 98.7 | Minus |
3L | 28110227 | 3L | 15836156..15836250 | 436..342 | 355 | 91.6 | Minus |
3L | 28110227 | 3L | 15836076..15836143 | 536..469 | 190 | 85.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 15827173..15827553 | 722..342 | 1905 | 100 | Minus |
3L | 28103327 | 3L | 15828294..15828483 | 193..4 | 950 | 100 | Minus |
3L | 28103327 | 3L | 15827834..15827985 | 343..192 | 760 | 100 | Minus |
3L | 28103327 | 3L | 15829880..15830031 | 343..192 | 730 | 98.6 | Minus |
3L | 28103327 | 3L | 15829256..15829350 | 436..342 | 355 | 91.5 | Minus |
3L | 28103327 | 3L | 15829176..15829243 | 536..469 | 190 | 85.2 | Minus |
3L | 28103327 | 3L | 15830357..15830401 | 193..149 | 165 | 91.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15823903..15824278 | 344..719 | 100 | <- | Minus |
chr3L | 15824561..15824710 | 194..343 | 99 | <- | Minus |
chr3L | 15825021..15825213 | 1..193 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18081-RA | 1..234 | 200..433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18081-RA | 1..234 | 200..433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18081-RA | 1..234 | 200..433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18081-RA | 1..234 | 200..433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18081-RA | 1..234 | 200..433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18081-RA | 1..719 | 1..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18081-RA | 1..719 | 1..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18081-RA | 3..721 | 1..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18081-RA | 1..719 | 1..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18081-RA | 3..721 | 1..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15834076..15834451 | 344..719 | 100 | <- | Minus |
3L | 15834734..15834883 | 194..343 | 100 | <- | Minus |
3L | 15835194..15835386 | 1..193 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15834076..15834451 | 344..719 | 100 | <- | Minus |
3L | 15834734..15834883 | 194..343 | 100 | <- | Minus |
3L | 15835194..15835386 | 1..193 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15834076..15834451 | 344..719 | 100 | <- | Minus |
3L | 15834734..15834883 | 194..343 | 100 | <- | Minus |
3L | 15835194..15835386 | 1..193 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15827176..15827551 | 344..719 | 100 | <- | Minus |
arm_3L | 15827834..15827983 | 194..343 | 100 | <- | Minus |
arm_3L | 15828294..15828486 | 1..193 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15827176..15827551 | 344..719 | 100 | <- | Minus |
3L | 15827834..15827983 | 194..343 | 100 | <- | Minus |
3L | 15828294..15828486 | 1..193 | 99 | Minus |
Translation from 199 to 432
> RE63284.hyp MARGHQKIQSQAKASEKQAKLKKQQGHSANDQKKAAQKALVYVCAVCKSQ MPDPKTYKQHFENKHPKNDMPDELKEV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18081-PC | 77 | CG18081-PC | 1..77 | 1..77 | 406 | 100 | Plus |
CG18081-PB | 77 | CG18081-PB | 1..77 | 1..77 | 406 | 100 | Plus |
CG18081-PA | 77 | CG18081-PA | 1..77 | 1..77 | 406 | 100 | Plus |
CG15715-PB | 77 | CG15715-PB | 1..77 | 1..77 | 398 | 97.4 | Plus |
CG15715-PA | 77 | CG15715-PA | 1..77 | 1..77 | 398 | 97.4 | Plus |
Translation from 199 to 432
> RE63284.pep MARGHQKIQSQAKASEKQAKLKKQQGHSANDQKKAAQKALVYVCAVCKSQ MPDPKTYKQHFENKHPKNDMPDELKEV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10372-PA | 77 | GF10372-PA | 1..77 | 1..77 | 374 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13518-PA | 77 | GG13518-PA | 1..77 | 1..77 | 383 | 97.4 | Plus |
Dere\GG13517-PA | 77 | GG13517-PA | 1..77 | 1..77 | 383 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14364-PA | 77 | GH14364-PA | 1..77 | 1..77 | 359 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18081-PC | 77 | CG18081-PC | 1..77 | 1..77 | 406 | 100 | Plus |
CG18081-PB | 77 | CG18081-PB | 1..77 | 1..77 | 406 | 100 | Plus |
CG18081-PA | 77 | CG18081-PA | 1..77 | 1..77 | 406 | 100 | Plus |
CG15715-PB | 77 | CG15715-PB | 1..77 | 1..77 | 398 | 97.4 | Plus |
CG15715-PA | 77 | CG15715-PA | 1..77 | 1..77 | 398 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20814-PA | 77 | GI20814-PA | 1..77 | 1..77 | 369 | 90.9 | Plus |
Dmoj\GI11305-PA | 77 | GI11305-PA | 1..77 | 1..77 | 363 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24927-PA | 77 | GL24927-PA | 1..77 | 1..77 | 364 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14782-PA | 77 | GA14782-PA | 1..77 | 1..77 | 364 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24462-PA | 77 | GM24462-PA | 1..77 | 1..77 | 389 | 98.7 | Plus |
Dsec\GM24461-PA | 579 | GM24461-PA | 522..579 | 19..77 | 265 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12534-PA | 77 | GD12534-PA | 1..77 | 1..77 | 389 | 98.7 | Plus |
Dsim\GD12533-PA | 77 | GD12533-PA | 1..77 | 1..77 | 389 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11224-PA | 77 | GJ11224-PA | 1..77 | 1..77 | 363 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15865-PA | 77 | GK15865-PA | 1..77 | 1..77 | 374 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22819-PA | 77 | GE22819-PA | 1..77 | 1..77 | 389 | 98.7 | Plus |
Dyak\GE19809-PA | 77 | GE19809-PA | 1..77 | 1..77 | 389 | 98.7 | Plus |
Dyak\GE22818-PA | 77 | GE22818-PA | 1..77 | 1..77 | 385 | 97.4 | Plus |
Dyak\GE19808-PA | 77 | GE19808-PA | 1..77 | 1..77 | 385 | 97.4 | Plus |