BDGP Sequence Production Resources |
Search the DGRC for RE64430
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 644 |
Well: | 30 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CycB3-RA |
Protein status: | RE64430.pep: gold |
Preliminary Size: | 2460 |
Sequenced Size: | 2556 |
Gene | Date | Evidence |
---|---|---|
CG5814 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5814 | 2002-12-10 | Blastp of sequenced clone |
CycB3 | 2008-04-29 | Release 5.5 accounting |
CycB3 | 2008-08-15 | Release 5.9 accounting |
CycB3 | 2008-12-18 | 5.12 accounting |
2556 bp (2556 high quality bases) assembled on 2002-12-10
GenBank Submission: BT003185
> RE64430.complete TGGGCGACCGAACGCCGCGGTACGGTCACACTGCAGGCCGCATCTGCATC TGGCATCTGGCGGTGTTTTTTTGATTTTTTACTCAGTGCTCTCTATCCCT CCGGCCAAGCGCCATAACTCCACAAAACTCGATCCGGAATTATATTGTGA GTTTGTGTGAATGTCTAGGCTTGATCGAGTCGACAATATCGGCAGTAGCG AACGACTCAAGTTCTAGCCAACACAAAGACCACATTCTGCAAGGAATCCG CTAGCGAGGATCTTGCTGAAACCAAGTGGAAGTGGAGGAGACGAGGACTC CAGGCGCCGCGCACAAGAACACAAACAACAAACGACGAGTGCGCTCACAC GCAAACACGCATTCAAAATGGCGCCCACAAAAGCAACAACGCGCGCGGCC ATCACAAGCGGGCATCATCAGCTGCAGCAGGCAGTGAATCCCATCCTGGG AGCCCTGGGAGCTGCCACTAGGAAGGGACTGACTCGGAGGGCGGCTGCCA CGGGAAACATCGATCCGAATGTGGAGAATATGCAGACGCGCGCCAAACGC AAGGCCGACCACAGTCCAATTAAAAATGACAAAATCAAGCGCTCGGCGCT GGGTAACCTGACCAACAATGTTAAGATCATGACACTGCATCCGGCACAGG ATGAGGAGCAGTCGGGCGTGGGCAAAAAGCCAACGGCCCAGCAGCTGCAG GCCCTGATGGATGCTAAGAAACAGGAGAATCTCAGCGTAAATGTCTTTGG CGCCAGTAAGATGACTACGCGCGCCTCCAGTAAAGTGGAGGATTCGGTGG AGAACTGCCACAAAGTGCTCGATAAGCTGGAAGAGGCGTTGGCCAGGCCC AAACCGCGCCCCAAGGCAGTGCCTGCCGCAAAAAAGACCGTTTTGGGGGA GGTTCAGCTACCGGCCATGCCAAATCCTATGCAGATTCCCGTTTTACTGC CGCCCACGCACAATCTGGCTGCTCCCCAGGTTGCCGCCGTCAAGCCAGTT CGTCGGATCTCCAATGACTTCAACAAGACTGAGGACAGCCTGTACATGTC CGCGCTGGAGGATGTCTCCAGTTGCGACTCCATGCGGCTGTCTGGAAACT TTGAGGCGGCGCGACGTCGCTCCGCCAAGTTGCAGCAAAAGACTGAGCAG CAGCCACAGCCGCTGTTGCTGACACTCCCAGAGACTGCTCCAAGCCAGGT GGTGCCCATTCCGCCAGTGCCCGAGGAAGTAGAGGACTTCGACCGCAAGA ACTGGGACGATCCCTTCCAGGTGTCCCACTACGCCATGGATATATTCAAC TACCTCAAAGTGCGCGAAGCGGAATTCCCCATTGCCGACTATATGCCCAG GCAGATCCATCTGACCACCTGGATGCGCACCCTGTTGGTCGACTGGATGG TGGAGGTGCAGGAAACGTTCGAGCTGAACCACGAGACTCTGTACCTAGCG GTTAAGATCGTCGATCTGTATCTCTGCCGCGAGGTGATCAACAAAGAGAA GCTGCAACTTCTGGGCGCCGCTGCCTTCTTTATTGCCTGCAAGTACGATG AGCGACAGCCGCCGCTTATAGAGGATTTTTTGTATATCTGCGATGGTGCT TATAATCACGACGAGCTGGTGCGAATGGAGCGGGAGACGCTGCGCGTTAT CAAGTACGATCTGGGCATCCCGCTCTCGTACCGTTTCCTGCGCCGCTATG CCCGATGCGCCAAGGTGCCTATGCCCACGCTGACCCTGGCTCGATACATC CTGGAATTGTCGCTCATGGATTACGCCAATATTTCGTTCAGTGACTCGCA GATGGCTTCGGCCGCACTGTTCATGGCACTGCGTATGCACGGCGGTCCGG GGCAGCTGGACAAGCAGACGTGGACATCGACGCTTATCTACTACACCGGC TATCAATTGGCGGACTTTGCTGAAATTGTGACCGCGCTCAATGCAGGACT GCATCGCAAGCCACGGGCCACCATCAAGACGATACGGAACAAGTACTCGC ACAAAATATTCCACGAGGTGGCCAAGGTGCCGCTGCTGACGAACCAGGAG CTCTTCCAGGGCAACCTTGACCTGAACGAAAGCAATCTGTCGTAGGACAG CCTCAAAGTTTAGCCAAATTCAACATGATACGATACGCTTCACTTAGGCT CTAAGACGCTTCTATTCCCAATATTAGCCCCATCCCGACGAAACAGCGGA TCCCCGCCTTAATCTAAAAACCCCTGATTTTACCCCTTACCTAGTGTTCC CGTCAAGTCCTCGCAATTTATTATATTTTAATTATTATTGTGACCTTCGC ATTATTGACATGTTTTTTGCATAAATATTATGTTAAGAGTGCTTTTGTTT CTTTTTGCCATGTATTATTGTTTAATTTTCCCACATACCGCATACGTAGC CGAACACAATCAATCTAAACTCGAAAGGCGACATTATCTTTAGCACCCCC ACCCAAAAAATCCCAAAACGATTCATGTTTTAATATGTACGTTAGTCTTA AGAGATGCCAGCATTAAATAAACCTAACTCGTAAGCCACCAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CycB3-RA | 2543 | CycB3-RA | 3..2543 | 3..2543 | 12705 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20691542..20694079 | 2540..3 | 12690 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24868353..24870893 | 2543..3 | 12705 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24609184..24611724 | 2543..3 | 12705 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1103..1215 | 2268..2379 | 157 | 62.3 | Plus |
G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 219..285 | 1127..1195 | 133 | 68.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20691542..20694081 | 1..2540 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycB3-RA | 1..1728 | 368..2095 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycB3-RA | 1..1728 | 368..2095 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycB3-RA | 1..1728 | 368..2095 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycB3-RA | 1..1728 | 368..2095 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycB3-RA | 1..1728 | 368..2095 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycB3-RA | 1..2540 | 1..2540 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycB3-RA | 1..2540 | 1..2540 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycB3-RA | 1..2461 | 80..2540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycB3-RA | 1..2540 | 1..2540 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycB3-RA | 1..2461 | 80..2540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24868356..24870895 | 1..2540 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24868356..24870895 | 1..2540 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24868356..24870895 | 1..2540 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20694078..20696617 | 1..2540 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24609187..24611726 | 1..2540 | 99 | Minus |
Translation from 367 to 2094
> RE64430.pep MAPTKATTRAAITSGHHQLQQAVNPILGALGAATRKGLTRRAAATGNIDP NVENMQTRAKRKADHSPIKNDKIKRSALGNLTNNVKIMTLHPAQDEEQSG VGKKPTAQQLQALMDAKKQENLSVNVFGASKMTTRASSKVEDSVENCHKV LDKLEEALARPKPRPKAVPAAKKTVLGEVQLPAMPNPMQIPVLLPPTHNL AAPQVAAVKPVRRISNDFNKTEDSLYMSALEDVSSCDSMRLSGNFEAARR RSAKLQQKTEQQPQPLLLTLPETAPSQVVPIPPVPEEVEDFDRKNWDDPF QVSHYAMDIFNYLKVREAEFPIADYMPRQIHLTTWMRTLLVDWMVEVQET FELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAFFIACKYDERQPPL IEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFLRRYARCAKV PMPTLTLARYILELSLMDYANISFSDSQMASAALFMALRMHGGPGQLDKQ TWTSTLIYYTGYQLADFAEIVTALNAGLHRKPRATIKTIRNKYSHKIFHE VAKVPLLTNQELFQGNLDLNESNLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18004-PA | 570 | GF18004-PA | 1..570 | 1..575 | 2443 | 81.2 | Plus |
Dana\GF11326-PA | 514 | GF11326-PA | 224..494 | 288..552 | 423 | 38.2 | Plus |
Dana\GF24509-PA | 466 | GF24509-PA | 178..454 | 275..563 | 393 | 32.9 | Plus |
Dana\GF14977-PA | 713 | GF14977-PA | 360..457 | 336..432 | 201 | 37.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12306-PA | 575 | GG12306-PA | 1..575 | 1..575 | 2882 | 95.5 | Plus |
Dere\GG20092-PA | 529 | GG20092-PA | 239..509 | 288..552 | 421 | 37.1 | Plus |
Dere\GG13881-PA | 491 | GG13881-PA | 194..449 | 292..554 | 387 | 33.2 | Plus |
Dere\GG24197-PA | 708 | GG24197-PA | 361..458 | 336..432 | 206 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16367-PA | 589 | GH16367-PA | 1..585 | 1..573 | 2192 | 71 | Plus |
Dgri\GH24294-PA | 494 | GH24294-PA | 33..492 | 47..575 | 1168 | 50.8 | Plus |
Dgri\GH13591-PA | 641 | GH13591-PA | 140..426 | 287..575 | 738 | 52.8 | Plus |
Dgri\GH22089-PA | 568 | GH22089-PA | 280..551 | 287..552 | 456 | 37.2 | Plus |
Dgri\GH13591-PA | 641 | GH13591-PA | 495..640 | 427..572 | 453 | 61.6 | Plus |
Dgri\GH16723-PA | 484 | GH16723-PA | 196..451 | 292..554 | 380 | 33.6 | Plus |
Dgri\GH13591-PA | 641 | GH13591-PA | 1..114 | 1..124 | 179 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CycB3-PB | 575 | CG5814-PB | 1..575 | 1..575 | 2958 | 100 | Plus |
CycB3-PA | 575 | CG5814-PA | 1..575 | 1..575 | 2958 | 100 | Plus |
CycB-PC | 500 | CG3510-PC | 210..480 | 288..552 | 405 | 36.1 | Plus |
CycB-PB | 524 | CG3510-PB | 234..504 | 288..552 | 405 | 36.1 | Plus |
CycB-PE | 528 | CG3510-PE | 238..508 | 288..552 | 405 | 36.1 | Plus |
CycB-PA | 530 | CG3510-PA | 240..510 | 288..552 | 405 | 36.1 | Plus |
CycA-PC | 490 | CG5940-PC | 198..445 | 301..552 | 368 | 33.9 | Plus |
CycA-PA | 491 | CG5940-PA | 199..446 | 301..552 | 368 | 33.9 | Plus |
CycE-PB | 602 | CG3938-PB | 254..351 | 336..432 | 196 | 38.8 | Plus |
CycE-PD | 709 | CG3938-PD | 361..458 | 336..432 | 196 | 38.8 | Plus |
CycE-PE | 709 | CG3938-PE | 361..458 | 336..432 | 196 | 38.8 | Plus |
CycE-PA | 709 | CG3938-PA | 361..458 | 336..432 | 196 | 38.8 | Plus |
CycE-PC | 709 | CG3938-PC | 361..458 | 336..432 | 196 | 38.8 | Plus |
CycE-PF | 712 | CG3938-PF | 364..461 | 336..432 | 196 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22195-PA | 575 | GI22195-PA | 1..574 | 1..575 | 2184 | 73.2 | Plus |
Dmoj\GI19224-PA | 519 | GI19224-PA | 209..509 | 267..559 | 450 | 34.9 | Plus |
Dmoj\GI13452-PA | 525 | GI13452-PA | 223..489 | 292..568 | 375 | 32.3 | Plus |
Dmoj\GI17292-PA | 647 | GI17292-PA | 276..373 | 336..432 | 209 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13555-PA | 554 | GL13555-PA | 1..554 | 27..575 | 2305 | 79.6 | Plus |
Dper\GL18583-PA | 439 | GL18583-PA | 24..429 | 68..567 | 1259 | 56.7 | Plus |
Dper\GL10703-PA | 559 | GL10703-PA | 269..539 | 288..552 | 435 | 37.2 | Plus |
Dper\GL13647-PA | 356 | GL13647-PA | 47..337 | 275..559 | 400 | 33.9 | Plus |
Dper\GL19431-PA | 338 | GL19431-PA | 39..318 | 269..552 | 351 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19151-PA | 576 | GA19151-PA | 1..576 | 1..575 | 2341 | 78 | Plus |
Dpse\GA25706-PA | 434 | GA25706-PA | 7..424 | 57..567 | 1240 | 55.7 | Plus |
Dpse\GA17491-PA | 516 | GA17491-PA | 226..496 | 288..552 | 434 | 37.2 | Plus |
Dpse\GA25959-PA | 349 | GA25959-PA | 39..329 | 269..552 | 420 | 34.7 | Plus |
Dpse\GA26976-PA | 356 | GA26976-PA | 47..337 | 275..559 | 392 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23449-PA | 575 | GM23449-PA | 1..575 | 1..575 | 2953 | 96 | Plus |
Dsec\GM15608-PA | 530 | GM15608-PA | 240..510 | 288..552 | 420 | 37.1 | Plus |
Dsec\GM24703-PA | 490 | GM24703-PA | 192..445 | 292..552 | 379 | 33.1 | Plus |
Dsec\GM14232-PA | 706 | GM14232-PA | 359..456 | 336..432 | 206 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18256-PA | 575 | GD18256-PA | 1..575 | 1..575 | 3048 | 98.4 | Plus |
Dsim\GD15503-PA | 528 | GD15503-PA | 238..508 | 288..552 | 422 | 36.7 | Plus |
Dsim\GD12771-PA | 490 | GD12771-PA | 192..458 | 292..568 | 377 | 31.9 | Plus |
Dsim\GD21944-PA | 701 | GD21944-PA | 354..451 | 336..432 | 206 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24313-PA | 575 | GJ24313-PA | 1..572 | 1..573 | 2210 | 74.5 | Plus |
Dvir\GJ20298-PA | 581 | GJ20298-PA | 263..564 | 267..552 | 461 | 34.8 | Plus |
Dvir\GJ11813-PA | 511 | GJ11813-PA | 213..480 | 292..569 | 398 | 34.5 | Plus |
Dvir\GJ17903-PA | 624 | GJ17903-PA | 268..365 | 336..432 | 197 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22753-PA | 583 | GK22753-PA | 1..581 | 1..570 | 1980 | 68.2 | Plus |
Dwil\GK21840-PA | 557 | GK21840-PA | 269..546 | 288..559 | 408 | 36.7 | Plus |
Dwil\GK13671-PA | 520 | GK13671-PA | 208..474 | 292..568 | 400 | 34.1 | Plus |
Dwil\GK13804-PA | 418 | GK13804-PA | 134..400 | 300..567 | 298 | 32.8 | Plus |
Dwil\GK24275-PA | 590 | GK24275-PA | 247..345 | 336..433 | 203 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10761-PA | 576 | GE10761-PA | 1..576 | 1..575 | 2973 | 96 | Plus |
Dyak\GE14470-PA | 544 | GE14470-PA | 254..524 | 288..552 | 425 | 35.8 | Plus |
Dyak\GE11834-PA | 529 | GE11834-PA | 239..509 | 288..552 | 424 | 35.4 | Plus |
Dyak\GE20173-PA | 484 | GE20173-PA | 187..442 | 292..554 | 382 | 33.2 | Plus |
Dyak\GE19392-PA | 713 | GE19392-PA | 366..463 | 336..432 | 206 | 38.8 | Plus |
Translation from 367 to 2094
> RE64430.hyp MAPTKATTRAAITSGHHQLQQAVNPILGALGAATRKGLTRRAAATGNIDP NVENMQTRAKRKADHSPIKNDKIKRSALGNLTNNVKIMTLHPAQDEEQSG VGKKPTAQQLQALMDAKKQENLSVNVFGASKMTTRASSKVEDSVENCHKV LDKLEEALARPKPRPKAVPAAKKTVLGEVQLPAMPNPMQIPVLLPPTHNL AAPQVAAVKPVRRISNDFNKTEDSLYMSALEDVSSCDSMRLSGNFEAARR RSAKLQQKTEQQPQPLLLTLPETAPSQVVPIPPVPEEVEDFDRKNWDDPF QVSHYAMDIFNYLKVREAEFPIADYMPRQIHLTTWMRTLLVDWMVEVQET FELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAFFIACKYDERQPPL IEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFLRRYARCAKV PMPTLTLARYILELSLMDYANISFSDSQMASAALFMALRMHGGPGQLDKQ TWTSTLIYYTGYQLADFAEIVTALNAGLHRKPRATIKTIRNKYSHKIFHE VAKVPLLTNQELFQGNLDLNESNLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CycB3-PB | 575 | CG5814-PB | 1..575 | 1..575 | 2958 | 100 | Plus |
CycB3-PA | 575 | CG5814-PA | 1..575 | 1..575 | 2958 | 100 | Plus |
CycB-PC | 500 | CG3510-PC | 210..480 | 288..552 | 405 | 36.1 | Plus |
CycB-PB | 524 | CG3510-PB | 234..504 | 288..552 | 405 | 36.1 | Plus |
CycB-PE | 528 | CG3510-PE | 238..508 | 288..552 | 405 | 36.1 | Plus |