BDGP Sequence Production Resources |
Search the DGRC for RE64534
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 645 |
Well: | 34 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG10208-RA |
Protein status: | RE64534.pep: gold |
Preliminary Size: | 900 |
Sequenced Size: | 1079 |
Gene | Date | Evidence |
---|---|---|
CG10208 | 2001-12-14 | Blastp of sequenced clone |
CG10208 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10208 | 2008-04-29 | Release 5.5 accounting |
CG10208 | 2008-08-15 | Release 5.9 accounting |
CG10208 | 2008-12-18 | 5.12 accounting |
1079 bp (1079 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071595
> RE64534.complete AGTAGTCATTCGATCGCTAGTTAGACCACAACATATTTACTCTCTGATTA GCTTCTTACCTGCTGCACGAGCGAAAAACGTTTCACTGGCCATGGCTGCT GTTGTTCCCACTGAAACCTCCGCCGCCCCCGCCTCCTGGTGTGGGCGCGG TGCCAAGCCCCGAACCTTTGAAAAGGAACCGCCAGTCATCTGCTATGACA AGCCCGCAGCTTCGATCGTTTCGAAGGAGGAGTATGATAATAAACGTTAT CGTGCCCTGACTGGCGATCTTGTGGAGACACTGATTGTGCCCAAACGGGA GGCACGCACCTGGACAATGCAAGAGGGTGATTTGTGCCGCGTCACTGTCC ACGAAGGTTCTCAGGTGGGCGACATGAACTTTTGGAATCTGGAGAACACC GCCGAGCGCTTCTACTCGGGCAAGACGCGCCAGCTGCACTCGTCGCATCT GCGCGTTTACGATCGTCTGTGGAGCTGCCTGCCCCACCTGCGTCCCATGG CCACCTTTGTGTTTGATTCCCTTGCCGCCTATGGCATCGATGAGGATGGC GGTGCTCTGCACGACGTAATTGGAACACGGTGCGACGACTACACCTACAA GCTAATCACGGGCAAGGATCGGGTGGGCAGTTGCCACAGTTCCCTAGTCA AGGCGGTGGTGGAGGAGCGCGGGCTGACCGAGCAGGATGTACACGACGTG TGGAACATCTTTATGTGCACCGGATTTACACGGGACACGCATCAGTATTT CTGCAAGGCAAGTCCAGCGCGCAAGGGGGATTTCATTGAGTTTGTGGCCG ACATGAATCTTCTGGTGGCTCTGAGCGCCTGTCCACAGGGCGATGTCTCC ATCGCAGTGGGCGCCGATGTGCCGGACGACAAGTGCCACCCCCTCAAGGT CGAAGTGTTCCGTCGCAAGTAAACAGAACCATTTTCATTCCGTGTGCGGA AATCTGGTTCTAACAGCGTGCCATTTATGTAAACAGTGCCATAGAGATGT GCAAGATCATCTTCCGTATTGATGACGAATTATCAATACAAATATATTAC TGCAATAATTAAAGAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19596418..19597243 | 239..1064 | 99 | <- | Minus |
chr3R | 19597310..19597547 | 1..238 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10208-RA | 1..831 | 92..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10208-RA | 1..831 | 92..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10208-RA | 1..831 | 92..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10208-RA | 1..831 | 92..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10208-RA | 1..831 | 92..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10208-RA | 1..1064 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10208-RA | 18..1077 | 1..1060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10208-RA | 5..1064 | 1..1060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10208-RA | 1..1064 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10208-RA | 5..1064 | 1..1060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23772994..23773819 | 239..1064 | 99 | <- | Minus |
3R | 23773886..23774123 | 1..238 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23772994..23773819 | 239..1064 | 99 | <- | Minus |
3R | 23773886..23774123 | 1..238 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23772994..23773819 | 239..1064 | 99 | <- | Minus |
3R | 23773886..23774123 | 1..238 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19598716..19599541 | 239..1064 | 99 | <- | Minus |
arm_3R | 19599608..19599845 | 1..238 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23513825..23514650 | 239..1064 | 99 | <- | Minus |
3R | 23514717..23514954 | 1..238 | 100 | Minus |
Translation from 0 to 921
> RE64534.hyp VVIRSLVRPQHIYSLISFLPAARAKNVSLAMAAVVPTETSAAPASWCGRG AKPRTFEKEPPVICYDKPAASIVSKEEYDNKRYRALTGDLVETLIVPKRE ARTWTMQEGDLCRVTVHEGSQVGDMNFWNLENTAERFYSGKTRQLHSSHL RVYDRLWSCLPHLRPMATFVFDSLAAYGIDEDGGALHDVIGTRCDDYTYK LITGKDRVGSCHSSLVKAVVEERGLTEQDVHDVWNIFMCTGFTRDTHQYF CKASPARKGDFIEFVADMNLLVALSACPQGDVSIAVGADVPDDKCHPLKV EVFRRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10208-PA | 276 | CG10208-PA | 1..276 | 31..306 | 1486 | 100 | Plus |
Translation from 91 to 921
> RE64534.pep MAAVVPTETSAAPASWCGRGAKPRTFEKEPPVICYDKPAASIVSKEEYDN KRYRALTGDLVETLIVPKREARTWTMQEGDLCRVTVHEGSQVGDMNFWNL ENTAERFYSGKTRQLHSSHLRVYDRLWSCLPHLRPMATFVFDSLAAYGID EDGGALHDVIGTRCDDYTYKLITGKDRVGSCHSSLVKAVVEERGLTEQDV HDVWNIFMCTGFTRDTHQYFCKASPARKGDFIEFVADMNLLVALSACPQG DVSIAVGADVPDDKCHPLKVEVFRRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18737-PA | 273 | GF18737-PA | 1..273 | 1..276 | 1332 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12403-PA | 276 | GG12403-PA | 1..276 | 1..276 | 1431 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11101-PA | 269 | GH11101-PA | 2..269 | 9..276 | 1267 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10208-PA | 276 | CG10208-PA | 1..276 | 1..276 | 1486 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24506-PA | 269 | GI24506-PA | 2..269 | 9..276 | 1253 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24269-PA | 270 | GL24269-PA | 3..270 | 9..276 | 1275 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10156-PA | 270 | GA10156-PA | 6..270 | 12..276 | 1275 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23538-PA | 276 | GM23538-PA | 1..276 | 1..276 | 1450 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18352-PA | 276 | GD18352-PA | 1..276 | 1..276 | 1466 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24643-PA | 269 | GJ24643-PA | 2..269 | 9..276 | 1265 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13520-PA | 273 | GK13520-PA | 4..273 | 7..276 | 1285 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23922-PA | 276 | GE23922-PA | 1..276 | 1..276 | 1451 | 96.4 | Plus |