BDGP Sequence Production Resources |
Search the DGRC for RE64695
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 646 |
Well: | 95 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG8005-RA |
Protein status: | RE64695.pep: gold |
Preliminary Size: | 1236 |
Sequenced Size: | 1242 |
Gene | Date | Evidence |
---|---|---|
CG8005 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8005 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8005 | 2003-08-11 | Blastp of sequenced clone |
CG8005 | 2008-04-29 | Release 5.5 accounting |
CG8005 | 2008-08-15 | Release 5.9 accounting |
CG8005 | 2008-12-18 | 5.12 accounting |
1242 bp (1242 high quality bases) assembled on 2003-08-11
GenBank Submission: BT010229
> RE64695.complete GCGTTAACCAGCACATGTTGATTAATGCATTACGATTGGGCTCCCCTTGA GCTGTTTATTTTGAATTTCAACAATTTCTGATTATGTCGACGGAGCCATC GGTGGCCAAGGATGCTGTGCTGAAGCGCAGCGAGGCTCTGGCGGAAAACA CGCCCCAAGTTAGTGGCTACGATTTCAACGAAGGCTTAGACTACAGTAAG CTCTTCGAATCCTATGTGAACACCGGGTTTCAGGCCACGAATCTTGGCCT GGCCATTCGGGAAATTAACAGAATGCTGGATTGCAGGGACCAGCCATTGG AAGCGGACCAAATAGACAGCCATGAAACAGACGACTTCATCCGTCGAAGA AGCAAGTGCACCGTATTTTTGGGCTACACATCCAACTTGGTTTCGTCCGG ACTGCGAGAGACCATTCGCTTTCTGGCCGAGCACCGTATGATCGACTGCA TTGTGACCACAGCTGGCGGCGTCGAGGAGGACTTCATCAAGTGCTTGGCT CCCACGTTCATGGGTTCATTTGAGCTGAGTGGCAGGGATCTCCGCGAGCG TGGAATCAACAGAATTGGCAACCTTCTGGTGCCGAACGATAATTACTGTA AGTTCGAGGACTGGGTGATGCCGCTGCTGGACGAGATGCTGGAGGAGCAA AAATCCCAGGGAACTATCTGGTCGCCGTCGAAGATTATTCATCGGTTGGG CGAACGGATTGGCGATCCTAGTTCCATTTACTATTGGGCTGCCAAGAATC AAATACCAGTCTTTTGTCCCGCCTTGACGGATGGCAGTCTGGGCGACATG ATGTACTTTCACTCCTTTCGACAACCTGGACTCGTGGTGGACATTCTGTC CGATCTGCGGAGGCTCAACACCATGGCTGTCAAGGCGGTCAACAGCGGGA TGATCATCGTGGGCGGCGGCGTTATCAAGCATCACATTTGTAATGCCAAT CTGATGCGCAATGGAGCGGATTACTCAGTGTTCATTAATACTGCCTCGGA GTTTGACGGCAGCGATAGCGGCGCTCGACCGGATGAGGCTATATCGTGGG GCAAGATCAGGAAGGATGCCACCCCTGTTAAGGTGTATGCCGAGGCTAGC TTGGTCTTTCCGTTGATTGTGGGTGAAACATTCGCCAAGCGGCATCACTG CGCCGGCAAAGAGCTGCCCCGAGAGACTAACCAAGTGTAAATATATACGA GAAAATAAGGACAACGCAATCAACGTAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 8190169..8190443 | 1..275 | 99 | -> | Plus |
chr3L | 8190502..8191451 | 276..1226 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8005-RA | 1..1107 | 84..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8005-RA | 1..1107 | 84..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8005-RA | 1..1107 | 84..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8005-RA | 1..1107 | 84..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8005-RA | 1..1107 | 84..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8005-RA | 1..1225 | 1..1225 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8005-RA | 1..1225 | 1..1225 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8005-RA | 3..1227 | 1..1225 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8005-RA | 1..1225 | 1..1225 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8005-RA | 3..1227 | 1..1225 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8198209..8198483 | 1..275 | 99 | -> | Plus |
3L | 8198542..8199491 | 276..1226 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8198209..8198483 | 1..275 | 99 | -> | Plus |
3L | 8198542..8199491 | 276..1226 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8198209..8198483 | 1..275 | 99 | -> | Plus |
3L | 8198542..8199491 | 276..1226 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 8191309..8191583 | 1..275 | 99 | -> | Plus |
arm_3L | 8191642..8192591 | 276..1226 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8191309..8191583 | 1..275 | 99 | -> | Plus |
3L | 8191642..8192591 | 276..1226 | 99 | Plus |
Translation from 83 to 1189
> RE64695.pep MSTEPSVAKDAVLKRSEALAENTPQVSGYDFNEGLDYSKLFESYVNTGFQ ATNLGLAIREINRMLDCRDQPLEADQIDSHETDDFIRRRSKCTVFLGYTS NLVSSGLRETIRFLAEHRMIDCIVTTAGGVEEDFIKCLAPTFMGSFELSG RDLRERGINRIGNLLVPNDNYCKFEDWVMPLLDEMLEEQKSQGTIWSPSK IIHRLGERIGDPSSIYYWAAKNQIPVFCPALTDGSLGDMMYFHSFRQPGL VVDILSDLRRLNTMAVKAVNSGMIIVGGGVIKHHICNANLMRNGADYSVF INTASEFDGSDSGARPDEAISWGKIRKDATPVKVYAEASLVFPLIVGETF AKRHHCAGKELPRETNQV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25102-PA | 367 | GF25102-PA | 1..367 | 1..368 | 1840 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14286-PA | 368 | GG14286-PA | 1..368 | 1..368 | 1953 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15495-PA | 362 | GH15495-PA | 1..354 | 1..354 | 1736 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8005-PA | 368 | CG8005-PA | 1..368 | 1..368 | 1926 | 100 | Plus |
CG8005-PB | 76 | CG8005-PB | 1..64 | 1..64 | 321 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16771-PA | 361 | GI16771-PA | 1..354 | 1..354 | 1678 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22536-PA | 365 | GL22536-PA | 1..354 | 1..354 | 1717 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24615-PA | 365 | GA24615-PA | 1..354 | 1..354 | 1722 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25027-PA | 368 | GM25027-PA | 1..368 | 1..368 | 1962 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14061-PA | 368 | GD14061-PA | 1..368 | 1..368 | 1975 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12516-PA | 362 | GJ12516-PA | 1..354 | 1..354 | 1737 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17181-PA | 364 | GK17181-PA | 13..361 | 6..354 | 1750 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20716-PA | 368 | GE20716-PA | 1..368 | 1..368 | 1936 | 97.6 | Plus |
Translation from 83 to 1189
> RE64695.hyp MSTEPSVAKDAVLKRSEALAENTPQVSGYDFNEGLDYSKLFESYVNTGFQ ATNLGLAIREINRMLDCRDQPLEADQIDSHETDDFIRRRSKCTVFLGYTS NLVSSGLRETIRFLAEHRMIDCIVTTAGGVEEDFIKCLAPTFMGSFELSG RDLRERGINRIGNLLVPNDNYCKFEDWVMPLLDEMLEEQKSQGTIWSPSK IIHRLGERIGDPSSIYYWAAKNQIPVFCPALTDGSLGDMMYFHSFRQPGL VVDILSDLRRLNTMAVKAVNSGMIIVGGGVIKHHICNANLMRNGADYSVF INTASEFDGSDSGARPDEAISWGKIRKDATPVKVYAEASLVFPLIVGETF AKRHHCAGKELPRETNQV*