BDGP Sequence Production Resources |
Search the DGRC for RE64763
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 647 |
Well: | 63 |
Vector: | pFlc-1 |
Associated Gene/Transcript | St3-RB |
Protein status: | RE64763.pep: gold |
Sequenced Size: | 1113 |
Gene | Date | Evidence |
---|---|---|
CG5431 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5431 | 2004-03-31 | Blastp of sequenced clone |
CG5431 | 2008-04-29 | Release 5.5 accounting |
CG5431 | 2008-08-15 | Release 5.9 accounting |
CG5431 | 2008-12-18 | 5.12 accounting |
1113 bp (1113 high quality bases) assembled on 2004-03-31
GenBank Submission: BT012452
> RE64763.complete TGAGTACGCTGTCGCTATGAATCGGGTTCAGGTCACGCCGCGGAGCTATC CCACGAACCTTATCGATAAGGACTGGGGAAATCGAAAGCTTTTTTATACG AAAGATTCGGAGAACTTTCTTCGCTTAGTCCACGATATGAAGCTCAGGGA TGACGATGTCTGGATCGTAACTCTACCGAAATGCGGAACCACTTGGATGC AGGAACTGCTCTGGTTGCTCCTCAACAACTGCGATTTCGAGGGGGCGTTG GCCAAGGATCAGGAGCTGCGAACTCCGTTTCTCGAGTTCGGTTACTCCGT TTTTCACGACCCGAACCGCTCATTCGGGCCTATCGAGGACCTGAAGTCCC CGCGACTGATAAAATCCCACCTTTCGCTTGCCCTCCTCCCATCAAAACTT TGGGAGGGAAAAAACAAAGTGATCTATGTGTCCCGTAACCCCCTGGACTC CTATGTCTCCCGATATTATCACGGAGTATCTTTTGGTTTCAATTACGGGA AGTCACTGCACCAGTACTTCGATGAGGTGCTGGCCTCTGATGATTTCCCC ACGGAGTTCATTGAACACGCCCACGAGTTCTACCAACTGAGGAACGAGCC TTGGGTATTCTACACCAGCTTTGAAATGATGAAGAAAGATCTGCGAGGAG TGATCAACGATGTCTCCAGATTTCTGAATAAACCCATCAACGATCAGCAA ATGGAGAAACTGCTAAAGCATTTGTCCTTCGCGGAAATGAAGAAAAATCC CACCACGAATCATCTGTGGGAGTTGGCCCAAGTTCAACACGAAAATGCTG GGAAAGAAATGCACCCATTCGTGAGACGTGGGGATGTCAATGGCTACAAG GACGAATTGAAGCCCGAACAAATTGAGAAGGCCAATGTCCGGATACAAGA GGTTCTTGCGAAGAACGGTGTGACTTTGGACGAACTACTGCTCCTGAAAG ATCAGTAAGATACATATTGAGAATAATCAAGATAATGTTGTATCTTTTGG TTTAGCTCGGAAGTAAATAACAGCGAGAGAGGAGAGCAAATAAAGCAAGG TCAAGCTGTTTGACCTACCAAACACCTTGTTCTTCAAATGTTTATCTAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5431-RB | 1194 | CG5431-RB | 24..1121 | 3..1100 | 5490 | 100 | Plus |
CG5431.b | 1274 | CG5431.b | 180..1274 | 3..1097 | 5475 | 100 | Plus |
CG5431.a | 1297 | CG5431.a | 180..1131 | 3..954 | 4760 | 100 | Plus |
CG5431.a | 1297 | CG5431.a | 1132..1226 | 1006..1100 | 475 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19569910..19570367 | 286..743 | 2290 | 100 | Plus |
chr2R | 21145070 | chr2R | 19569564..19569848 | 3..287 | 1410 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 19570555..19570835 | 817..1097 | 1315 | 97.9 | Plus |
chr2R | 21145070 | chr2R | 19570429..19570501 | 744..816 | 365 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23683729..23684186 | 286..743 | 2290 | 100 | Plus |
2R | 25286936 | 2R | 23683383..23683667 | 3..287 | 1425 | 100 | Plus |
2R | 25286936 | 2R | 23684374..23684657 | 817..1100 | 1420 | 100 | Plus |
2R | 25286936 | 2R | 23684248..23684320 | 744..816 | 365 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23684928..23685385 | 286..743 | 2290 | 100 | Plus |
2R | 25260384 | 2R | 23684582..23684866 | 3..287 | 1425 | 100 | Plus |
2R | 25260384 | 2R | 23685573..23685856 | 817..1100 | 1420 | 100 | Plus |
2R | 25260384 | 2R | 23685447..23685519 | 744..816 | 365 | 100 | Plus |
2R | 25260384 | 2R | 23683099..23683160 | 147..208 | 160 | 83.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19569562..19569846 | 1..285 | 99 | -> | Plus |
chr2R | 19569910..19570367 | 286..743 | 100 | -> | Plus |
chr2R | 19570429..19570501 | 744..816 | 100 | -> | Plus |
chr2R | 19570555..19570835 | 817..1097 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5431-RB | 1..942 | 17..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5431-RB | 1..942 | 17..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
St3-RB | 1..942 | 17..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5431-RB | 1..942 | 17..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
St3-RB | 1..942 | 17..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5431-RB | 1..1097 | 1..1097 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5431-RB | 1..1097 | 1..1097 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
St3-RB | 5..1101 | 1..1097 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5431-RB | 1..1097 | 1..1097 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
St3-RB | 5..1101 | 1..1097 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23683381..23683665 | 1..285 | 99 | -> | Plus |
2R | 23683729..23684186 | 286..743 | 100 | -> | Plus |
2R | 23684248..23684320 | 744..816 | 100 | -> | Plus |
2R | 23684374..23684654 | 817..1097 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23683381..23683665 | 1..285 | 99 | -> | Plus |
2R | 23683729..23684186 | 286..743 | 100 | -> | Plus |
2R | 23684248..23684320 | 744..816 | 100 | -> | Plus |
2R | 23684374..23684654 | 817..1097 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23683381..23683665 | 1..285 | 99 | -> | Plus |
2R | 23683729..23684186 | 286..743 | 100 | -> | Plus |
2R | 23684248..23684320 | 744..816 | 100 | -> | Plus |
2R | 23684374..23684654 | 817..1097 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19571771..19571843 | 744..816 | 100 | -> | Plus |
arm_2R | 19570904..19571188 | 1..285 | 99 | -> | Plus |
arm_2R | 19571252..19571709 | 286..743 | 100 | -> | Plus |
arm_2R | 19571897..19572177 | 817..1097 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23684598..23684882 | 1..285 | 99 | -> | Plus |
2R | 23684946..23685403 | 286..743 | 100 | -> | Plus |
2R | 23685465..23685537 | 744..816 | 100 | -> | Plus |
2R | 23685591..23685871 | 817..1097 | 100 | Plus |
Translation from 0 to 957
> RE64763.hyp QYAVAMNRVQVTPRSYPTNLIDKDWGNRKLFYTKDSENFLRLVHDMKLRD DDVWIVTLPKCGTTWMQELLWLLLNNCDFEGALAKDQELRTPFLEFGYSV FHDPNRSFGPIEDLKSPRLIKSHLSLALLPSKLWEGKNKVIYVSRNPLDS YVSRYYHGVSFGFNYGKSLHQYFDEVLASDDFPTEFIEHAHEFYQLRNEP WVFYTSFEMMKKDLRGVINDVSRFLNKPINDQQMEKLLKHLSFAEMKKNP TTNHLWELAQVQHENAGKEMHPFVRRGDVNGYKDELKPEQIEKANVRIQE VLAKNGVTLDELLLLKDQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
St3-PB | 313 | CG44167-PB | 1..313 | 6..318 | 1680 | 100 | Plus |
St3-PC | 526 | CG44167-PC | 1..313 | 6..318 | 1680 | 100 | Plus |
St3-PA | 331 | CG44167-PA | 1..312 | 6..317 | 1675 | 100 | Plus |
St1-PB | 338 | CG5428-PB | 32..310 | 15..293 | 543 | 41.9 | Plus |
St4-PB | 346 | CG6704-PB | 38..338 | 26..300 | 302 | 31.2 | Plus |
Translation from 1 to 957
> RE64763.pep EYAVAMNRVQVTPRSYPTNLIDKDWGNRKLFYTKDSENFLRLVHDMKLRD DDVWIVTLPKCGTTWMQELLWLLLNNCDFEGALAKDQELRTPFLEFGYSV FHDPNRSFGPIEDLKSPRLIKSHLSLALLPSKLWEGKNKVIYVSRNPLDS YVSRYYHGVSFGFNYGKSLHQYFDEVLASDDFPTEFIEHAHEFYQLRNEP WVFYTSFEMMKKDLRGVINDVSRFLNKPINDQQMEKLLKHLSFAEMKKNP TTNHLWELAQVQHENAGKEMHPFVRRGDVNGYKDELKPEQIEKANVRIQE VLAKNGVTLDELLLLKDQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13072-PA | 272 | GF13072-PA | 1..272 | 46..317 | 1021 | 72.8 | Plus |
Dana\GF13071-PA | 338 | GF13071-PA | 20..310 | 3..293 | 557 | 41.2 | Plus |
Dana\GF24091-PA | 733 | GF24091-PA | 1..189 | 66..253 | 345 | 42.1 | Plus |
Dana\GF16584-PA | 316 | GF16584-PA | 47..314 | 43..310 | 310 | 29.5 | Plus |
Dana\GF11151-PA | 346 | GF11151-PA | 56..311 | 44..277 | 284 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22875-PA | 314 | GG22875-PA | 1..311 | 6..315 | 1443 | 86.2 | Plus |
Dere\GG22874-PA | 338 | GG22874-PA | 20..310 | 3..293 | 550 | 39.9 | Plus |
Dere\GG22455-PA | 346 | GG22455-PA | 56..320 | 44..290 | 301 | 33.6 | Plus |
Dere\GG15423-PA | 316 | GG15423-PA | 47..314 | 43..310 | 294 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20667-PA | 313 | GH20667-PA | 1..310 | 6..315 | 1032 | 63.2 | Plus |
Dgri\GH20666-PA | 338 | GH20666-PA | 20..310 | 3..293 | 576 | 41.6 | Plus |
Dgri\GH23313-PA | 310 | GH23313-PA | 17..302 | 21..308 | 441 | 37 | Plus |
Dgri\GH17085-PA | 312 | GH17085-PA | 37..303 | 43..307 | 426 | 36.2 | Plus |
Dgri\GH22840-PA | 346 | GH22840-PA | 52..323 | 44..294 | 319 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
St3-PC | 526 | CG44167-PC | 1..313 | 6..318 | 1680 | 100 | Plus |
St3-PB | 313 | CG44167-PB | 1..313 | 6..318 | 1680 | 100 | Plus |
St3-PA | 331 | CG44167-PA | 1..312 | 6..317 | 1675 | 100 | Plus |
St1-PB | 338 | CG5428-PB | 32..310 | 15..293 | 543 | 41.9 | Plus |
St4-PB | 346 | CG6704-PB | 38..338 | 26..300 | 302 | 31.2 | Plus |
St4-PA | 346 | CG6704-PA | 38..338 | 26..300 | 302 | 31.2 | Plus |
St2-PB | 316 | CG16733-PB | 47..314 | 43..310 | 293 | 28.1 | Plus |
St2-PA | 316 | CG16733-PA | 47..314 | 43..310 | 293 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19029-PA | 345 | GI19029-PA | 34..310 | 17..293 | 578 | 43.6 | Plus |
Dmoj\GI22042-PA | 316 | GI22042-PA | 47..314 | 43..310 | 314 | 30.2 | Plus |
Dmoj\GI21219-PA | 349 | GI21219-PA | 56..311 | 44..277 | 305 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16877-PA | 312 | GL16877-PA | 1..311 | 6..317 | 1096 | 65.7 | Plus |
Dper\GL16876-PA | 334 | GL16876-PA | 34..310 | 17..293 | 569 | 43.6 | Plus |
Dper\GL13941-PA | 290 | GL13941-PA | 47..265 | 43..253 | 291 | 30.8 | Plus |
Dper\GL20087-PA | 350 | GL20087-PA | 56..319 | 44..285 | 272 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18876-PA | 313 | GA18876-PA | 1..311 | 6..317 | 1090 | 65.4 | Plus |
Dpse\GA24321-PA | 334 | GA24321-PA | 34..310 | 17..293 | 568 | 43.6 | Plus |
Dpse\GA14114-PA | 316 | GA14114-PA | 47..314 | 43..310 | 309 | 28.1 | Plus |
Dpse\GA19797-PA | 350 | GA19797-PA | 38..318 | 26..284 | 272 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16035-PA | 313 | GM16035-PA | 1..312 | 6..317 | 1562 | 93.6 | Plus |
Dsec\GM16034-PA | 338 | GM16034-PA | 20..310 | 3..293 | 553 | 40.5 | Plus |
Dsec\GM20241-PA | 346 | GM20241-PA | 21..320 | 18..290 | 304 | 32.4 | Plus |
Dsec\GM23787-PA | 316 | GM23787-PA | 47..314 | 43..310 | 289 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11783-PA | 309 | GD11783-PA | 1..304 | 6..309 | 1529 | 93.4 | Plus |
Dsim\GD11782-PA | 338 | GD11782-PA | 20..310 | 3..293 | 551 | 40.2 | Plus |
Dsim\GD25727-PA | 346 | GD25727-PA | 21..320 | 18..290 | 303 | 32.4 | Plus |
Dsim\GD18598-PA | 316 | GD18598-PA | 47..314 | 43..310 | 293 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19997-PA | 314 | GJ19997-PA | 1..303 | 6..308 | 950 | 59.4 | Plus |
Dvir\GJ19995-PA | 345 | GJ19995-PA | 34..310 | 17..293 | 567 | 42.9 | Plus |
Dvir\GJ11360-PA | 306 | GJ11360-PA | 14..283 | 21..293 | 486 | 40 | Plus |
Dvir\GJ11359-PA | 400 | GJ11359-PA | 47..377 | 21..293 | 322 | 29.3 | Plus |
Dvir\GJ20821-PA | 349 | GJ20821-PA | 54..348 | 42..307 | 309 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23068-PA | 314 | GK23068-PA | 1..314 | 6..318 | 1005 | 61.8 | Plus |
Dwil\GK23067-PA | 338 | GK23067-PA | 20..308 | 3..291 | 540 | 40.8 | Plus |
Dwil\GK19529-PA | 344 | GK19529-PA | 47..344 | 32..312 | 324 | 32.4 | Plus |
Dwil\GK22430-PA | 319 | GK22430-PA | 47..317 | 43..310 | 285 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14313-PA | 317 | GE14313-PA | 1..310 | 6..315 | 1461 | 87.7 | Plus |
Dyak\GE14312-PA | 338 | GE14312-PA | 20..310 | 3..293 | 550 | 40.2 | Plus |
Dyak\GE13326-PA | 346 | GE13326-PA | 21..320 | 18..290 | 296 | 31.7 | Plus |
Dyak\GE25933-PA | 316 | GE25933-PA | 47..314 | 43..310 | 288 | 28.1 | Plus |