BDGP Sequence Production Resources |
Search the DGRC for RE65147
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 651 |
Well: | 47 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11149-RC |
Protein status: | RE65147.pep: gold |
Sequenced Size: | 1954 |
Gene | Date | Evidence |
---|---|---|
CG11149 | 2008-04-29 | Release 5.5 accounting |
CG11149 | 2008-08-15 | Release 5.9 accounting |
CG11149 | 2008-12-18 | 5.12 accounting |
1954 bp (1954 high quality bases) assembled on 2006-08-24
GenBank Submission: BT028805
> RE65147.complete AGTCTGTTTCCATTATTCATCGCCGAATGTTGTCTGTCTCGTTCGTGAAA TAACTTTTAATCTTAACAGAAAAAAATCCCTCAAACAATTTGCGTCGTTT CGTACGTCATAAAATGGGTTAATCTTTAATGTGCAAACTCTTGTCGATGG AAATGAAAGTGTCAGCCGGTCAATAAGTTCTTTGTGTTCTGTTAGTTAAG GAGTTCCTGTGAATCAATGTTCTCGAAATCAGCATGGCGACCATAAGTTT TTGCAATAGGAAATATGTCCGTCTGTGGCCAGTGCTCATACTGTTCAATG TGGCACTCCTGCTGGTTTGGAGGAACCTGCAGCAGGCCCAGAAACTGGCC GCATCTTCTAATACTGGTGGGCAAAAGTCGGTAGGACTTTTGCTGTCCAA CGAGTCGAATCCCTCACGTTTTTCTGCAAACTTCCATCTCGCCAATGATC AGCATCCGAAAATAATCCGGCGAGAGGACTCCGCTCGCACCAAGGAATTG CGATCATTGCTCAAGTGCCGCGACCGATCGCTCCGTTTCGAGAGGCTTCA GCACGGAGAGTTCTGGCTGCTTCAGAATCTTGTCATGGGACGAAAGAGTC GGGAAGTCGGCTGTGCCGAGTCCGTGACGTATACCACCAACGGGGACTTT ACGTTCTTCGATAATCTGGAAATGGTGGTATCACGTTGGCGTGCTCCAGT TAGTTTTGCCATCCACACTCCAGGTTATGATCTTAACACCACACTGGATG CCATTCGGTATGTGCGAAACTGTTTGCCGGAGAGCGATAGCATCAAGGAC TGGGTCTCCTTTCACGTGTACTTCCCAAATCAGCACATGCCGGAATACGT GCCATATGACGAGGCCGAGGTACTAATGTATCCGCACATGTGCACCCTGG CCAATGGATCGTTGGTATCGCCGCTCTACACGCAAATCCCAACCACGGAT AGCTACAAGTCAAGGGCCAACCTCACGTACCCCATCAATGTGGGCAGGAA TATAGCCAGGCTGGCGACCAACACCCACTTCATCTTTGCCTGCGACATCG AGCTGTATCCCAGTGTGGGCTTCGTCGACCAATTCCTGGACATGGTGGCC AGAAACCACAGTGTCCTTGCACTGGATCCGCGGCAACGCAGAAGGGTGTA TCCTCTACCCGTTTTCGAGATCGAAACGGGCGCCAAAGTGCCGGTAGACA AGGACGAATTGTTGGCCCTCTATCGAAAGCAGCAGGCGCAGGTGTTTCAC CTGAAGCTTTGCCCCACATGCCACACTATTCCTGGCCAAGAAGAGTGGCT CAATCGAACCTCTCGAGCCGATGACCATCTGCACGTGTTTAGCAAGGCGC TGCGAAAATGGAAGTTCCGAGCCTGGGAGCCCTTCTATGTAAGCGATAAC ACGGAGCCACTGTTCGACGAACGCGTCACGTGGGAGGGTCAGTCGAACAA GCGCATACAGAACTATGCTATGTGCCTTTTGGACTACGAATACCATGTCT TGAGTCCCGCATTTCTAGTGCACAGTCCTGGGATCAAGCAATCCAGCAAA GCTGACTCCACTCGTCTTCAATACGCGAAGGAAATGACTAAATTTATTAA GAATAAAATCGAGCCCGAATATCGTGTGCTCTTCGGAAAGAACTCAGCCT GCAAGACGTGACATTACTTTGATAATATAACAAATAATGTAATTAATGAA TTTATGCCCCATCTAAGTTATGCCTTTATAGGAAAAAGAGTCTATTCTTT TTACTACTTAAACCGAGTAGTATGTATATTTTGAACTTAATGCTCACTGC TTGCTATTCATCAATGTGAAAATATATTATATTTTATACAATTAGATAAT AAGACCTAATGGATACAATTCCCTATACCTTGGGAAACTGATTGCTCCGC TGTTTCATGTAGTACAATATATAGAACATAAATTTTAAACTAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11149-RC | 1941 | CG11149-RC | 1..1939 | 1..1939 | 9695 | 100 | Plus |
CG11149-RA | 1995 | CG11149-RA | 1..1460 | 1..1460 | 7300 | 100 | Plus |
CG11149-RB | 1949 | CG11149-RB | 122..1414 | 168..1460 | 6465 | 100 | Plus |
CG11149-RA | 1995 | CG11149-RA | 1512..1993 | 1458..1939 | 2410 | 100 | Plus |
CG11149-RB | 1949 | CG11149-RB | 1466..1947 | 1458..1939 | 2410 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 5717764..5718539 | 1460..685 | 3880 | 100 | Minus |
chr2L | 23010047 | chr2L | 5718619..5719136 | 685..168 | 2590 | 100 | Minus |
chr2L | 23010047 | chr2L | 5717231..5717712 | 1939..1458 | 2410 | 100 | Minus |
chr2L | 23010047 | chr2L | 5719479..5719648 | 170..1 | 850 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 5718656..5719431 | 1460..685 | 3880 | 100 | Minus |
2L | 23513712 | 2L | 5719511..5720028 | 685..168 | 2590 | 100 | Minus |
2L | 23513712 | 2L | 5718118..5718604 | 1944..1458 | 2420 | 99.8 | Minus |
2L | 23513712 | 2L | 5720371..5720540 | 170..1 | 850 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 5718656..5719431 | 1460..685 | 3880 | 100 | Minus |
2L | 23513712 | 2L | 5719511..5720028 | 685..168 | 2590 | 100 | Minus |
2L | 23513712 | 2L | 5718118..5718604 | 1944..1458 | 2420 | 99.7 | Minus |
2L | 23513712 | 2L | 5720371..5720540 | 170..1 | 850 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
P-element | 2907 | P-element PPI251 2907bp AKA(V01520,X69493) Derived from X06779 (g58305) (Rel. 49, Last updated, Version 8). | 2505..2632 | 1659..1794 | 120 | 58.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 5717244..5717709 | 1461..1926 | 100 | <- | Minus |
chr2L | 5717764..5718538 | 686..1460 | 100 | <- | Minus |
chr2L | 5718619..5719135 | 169..685 | 100 | <- | Minus |
chr2L | 5719481..5719648 | 1..168 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11149-RA | 1..1227 | 234..1460 | 100 | -> | Plus |
CG11149-RA | 1282..1482 | 1461..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11149-RC | 1..1428 | 234..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11149-RC | 1..1428 | 234..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11149-RA | 1..1227 | 234..1460 | 100 | -> | Plus |
CG11149-RA | 1282..1482 | 1461..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11149-RC | 1..1428 | 234..1661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11149-RA | 1515..1994 | 1461..1941 | 99 | Plus | |
CG11149-RA | 1..1460 | 1..1460 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11149-RC | 1..1940 | 1..1941 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11149-RC | 1..1940 | 1..1941 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11149-RA | 1..1460 | 1..1460 | 100 | -> | Plus |
CG11149-RA | 1515..1994 | 1461..1941 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11149-RC | 1..1940 | 1..1941 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5720373..5720540 | 1..168 | 100 | Minus | |
2L | 5718121..5718601 | 1461..1941 | 99 | <- | Minus |
2L | 5718656..5719430 | 686..1460 | 100 | <- | Minus |
2L | 5719511..5720027 | 169..685 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5720373..5720540 | 1..168 | 100 | Minus | |
2L | 5718121..5718601 | 1461..1941 | 99 | <- | Minus |
2L | 5718656..5719430 | 686..1460 | 100 | <- | Minus |
2L | 5719511..5720027 | 169..685 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5720373..5720540 | 1..168 | 100 | Minus | |
2L | 5718121..5718601 | 1461..1941 | 99 | <- | Minus |
2L | 5718656..5719430 | 686..1460 | 100 | <- | Minus |
2L | 5719511..5720027 | 169..685 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 5720373..5720540 | 1..168 | 100 | Minus | |
arm_2L | 5718121..5718601 | 1461..1941 | 99 | <- | Minus |
arm_2L | 5718656..5719430 | 686..1460 | 100 | <- | Minus |
arm_2L | 5719511..5720027 | 169..685 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5718121..5718601 | 1461..1941 | 99 | <- | Minus |
2L | 5718656..5719430 | 686..1460 | 100 | <- | Minus |
2L | 5719511..5720027 | 169..685 | 100 | <- | Minus |
2L | 5720373..5720540 | 1..168 | 100 | Minus |
Translation from 233 to 1660
> RE65147.pep MATISFCNRKYVRLWPVLILFNVALLLVWRNLQQAQKLAASSNTGGQKSV GLLLSNESNPSRFSANFHLANDQHPKIIRREDSARTKELRSLLKCRDRSL RFERLQHGEFWLLQNLVMGRKSREVGCAESVTYTTNGDFTFFDNLEMVVS RWRAPVSFAIHTPGYDLNTTLDAIRYVRNCLPESDSIKDWVSFHVYFPNQ HMPEYVPYDEAEVLMYPHMCTLANGSLVSPLYTQIPTTDSYKSRANLTYP INVGRNIARLATNTHFIFACDIELYPSVGFVDQFLDMVARNHSVLALDPR QRRRVYPLPVFEIETGAKVPVDKDELLALYRKQQAQVFHLKLCPTCHTIP GQEEWLNRTSRADDHLHVFSKALRKWKFRAWEPFYVSDNTEPLFDERVTW EGQSNKRIQNYAMCLLDYEYHVLSPAFLVHSPGIKQSSKADSTRLQYAKE MTKFIKNKIEPEYRVLFGKNSACKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14309-PA | 398 | GF14309-PA | 2..395 | 3..409 | 1363 | 63.7 | Plus |
Dana\GF14302-PA | 574 | GF14302-PA | 190..572 | 77..473 | 887 | 42.8 | Plus |
Dana\GF15654-PA | 411 | GF15654-PA | 34..409 | 87..473 | 704 | 36.4 | Plus |
Dana\GF11373-PA | 377 | GF11373-PA | 5..324 | 97..430 | 235 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24286-PA | 470 | GG24286-PA | 1..470 | 1..475 | 2152 | 85.1 | Plus |
Dere\GG24282-PA | 548 | GG24282-PA | 164..546 | 77..473 | 880 | 42.3 | Plus |
Dere\GG10238-PA | 407 | GG10238-PA | 30..405 | 88..473 | 717 | 37.5 | Plus |
Dere\GG22943-PA | 389 | GG22943-PA | 20..336 | 100..430 | 216 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10695-PA | 449 | GH10695-PA | 53..449 | 73..475 | 1433 | 65 | Plus |
Dgri\GH10688-PA | 542 | GH10688-PA | 158..540 | 77..473 | 857 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11149-PE | 475 | CG11149-PE | 1..475 | 1..475 | 2528 | 100 | Plus |
CG11149-PD | 475 | CG11149-PD | 1..475 | 1..475 | 2528 | 100 | Plus |
CG11149-PC | 475 | CG11149-PC | 1..475 | 1..475 | 2528 | 100 | Plus |
CG11149-PA | 493 | CG11149-PA | 1..493 | 1..475 | 2499 | 96.3 | Plus |
CG11149-PB | 493 | CG11149-PB | 1..493 | 1..475 | 2499 | 96.3 | Plus |
CG9171-PG | 544 | CG9171-PG | 160..542 | 77..473 | 858 | 42.1 | Plus |
CG9171-PF | 544 | CG9171-PF | 160..542 | 77..473 | 858 | 42.1 | Plus |
CG9171-PE | 544 | CG9171-PE | 160..542 | 77..473 | 858 | 42.1 | Plus |
CG9171-PD | 544 | CG9171-PD | 160..542 | 77..473 | 858 | 42.1 | Plus |
CG9171-PC | 544 | CG9171-PC | 160..542 | 77..473 | 858 | 42.1 | Plus |
CG15483-PA | 407 | CG15483-PA | 30..405 | 88..473 | 691 | 36.3 | Plus |
CG3253-PB | 389 | CG3253-PB | 64..336 | 143..430 | 207 | 27.1 | Plus |
CG3253-PA | 389 | CG3253-PA | 64..336 | 143..430 | 207 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11232-PA | 458 | GI11232-PA | 23..458 | 28..475 | 1469 | 61.7 | Plus |
Dmoj\GI11204-PA | 532 | GI11204-PA | 116..530 | 53..473 | 874 | 40.3 | Plus |
Dmoj\GI21341-PA | 390 | GI21341-PA | 20..388 | 89..473 | 756 | 40 | Plus |
Dmoj\GI18863-PA | 385 | GI18863-PA | 43..341 | 117..430 | 273 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26639-PA | 471 | GL26639-PA | 3..471 | 10..475 | 1566 | 63.3 | Plus |
Dper\GL19727-PA | 637 | GL19727-PA | 257..635 | 88..473 | 680 | 36.9 | Plus |
Dper\GL19115-PA | 240 | GL19115-PA | 68..238 | 300..473 | 379 | 39.7 | Plus |
Dper\GL26378-PA | 643 | GL26378-PA | 268..576 | 106..429 | 314 | 28.4 | Plus |
Dper\GL26376-PA | 415 | GL26376-PA | 57..374 | 106..438 | 221 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10796-PA | 471 | GA10796-PA | 3..471 | 10..475 | 1562 | 62.8 | Plus |
Dpse\GA21591-PA | 561 | GA21591-PA | 163..559 | 64..473 | 877 | 42.6 | Plus |
Dpse\GA13763-PA | 411 | GA13763-PA | 31..409 | 88..473 | 698 | 37.9 | Plus |
Dpse\GA28839-PA | 673 | GA28839-PA | 298..606 | 106..429 | 304 | 28.1 | Plus |
Dpse\GA16964-PA | 506 | GA16964-PA | 43..341 | 117..430 | 220 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18003-PA | 339 | GM18003-PA | 1..279 | 1..280 | 1287 | 89.3 | Plus |
Dsec\GM25976-PA | 407 | GM25976-PA | 24..405 | 82..473 | 699 | 36.5 | Plus |
Dsec\GM18004-PA | 63 | GM18004-PA | 1..63 | 413..475 | 318 | 92.1 | Plus |
Dsec\GM17997-PA | 339 | GM17997-PA | 246..337 | 381..473 | 246 | 43 | Plus |
Dsec\GM18308-PA | 408 | GM18308-PA | 184..355 | 248..430 | 202 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14937-PA | 335 | GD14937-PA | 1..335 | 141..475 | 1701 | 92.8 | Plus |
Dsim\GD22631-PA | 544 | GD22631-PA | 160..542 | 77..473 | 874 | 41.8 | Plus |
Dsim\GD22637-PA | 164 | GD22637-PA | 1..151 | 1..151 | 662 | 89.4 | Plus |
Dsim\GD22096-PA | 335 | GD22096-PA | 20..330 | 82..401 | 538 | 34.5 | Plus |
Dsim\GD15463-PA | 389 | GD15463-PA | 20..336 | 100..430 | 217 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12303-PA | 461 | GJ12303-PA | 25..461 | 30..475 | 1506 | 62.5 | Plus |
Dvir\GJ18327-PA | 547 | GJ18327-PA | 163..545 | 77..473 | 858 | 41.3 | Plus |
Dvir\GJ11128-PA | 396 | GJ11128-PA | 18..394 | 81..473 | 678 | 35.1 | Plus |
Dvir\GJ20432-PA | 208 | GJ20432-PA | 2..166 | 255..430 | 188 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15424-PA | 482 | GK15424-PA | 2..482 | 4..475 | 1634 | 63.6 | Plus |
Dwil\GK15419-PA | 551 | GK15419-PA | 143..549 | 44..473 | 891 | 41.9 | Plus |
Dwil\GK21937-PA | 378 | GK21937-PA | 31..330 | 117..430 | 252 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18982-PA | 469 | GE18982-PA | 1..469 | 1..475 | 2153 | 85.7 | Plus |
Dyak\GE18978-PA | 549 | GE18978-PA | 149..547 | 63..473 | 874 | 41.4 | Plus |
Dyak\GE12044-PA | 407 | GE12044-PA | 24..405 | 82..473 | 714 | 36.5 | Plus |
Dyak\GE14380-PA | 389 | GE14380-PA | 20..336 | 100..430 | 209 | 25.4 | Plus |
Translation from 233 to 1660
> RE65147.hyp MATISFCNRKYVRLWPVLILFNVALLLVWRNLQQAQKLAASSNTGGQKSV GLLLSNESNPSRFSANFHLANDQHPKIIRREDSARTKELRSLLKCRDRSL RFERLQHGEFWLLQNLVMGRKSREVGCAESVTYTTNGDFTFFDNLEMVVS RWRAPVSFAIHTPGYDLNTTLDAIRYVRNCLPESDSIKDWVSFHVYFPNQ HMPEYVPYDEAEVLMYPHMCTLANGSLVSPLYTQIPTTDSYKSRANLTYP INVGRNIARLATNTHFIFACDIELYPSVGFVDQFLDMVARNHSVLALDPR QRRRVYPLPVFEIETGAKVPVDKDELLALYRKQQAQVFHLKLCPTCHTIP GQEEWLNRTSRADDHLHVFSKALRKWKFRAWEPFYVSDNTEPLFDERVTW EGQSNKRIQNYAMCLLDYEYHVLSPAFLVHSPGIKQSSKADSTRLQYAKE MTKFIKNKIEPEYRVLFGKNSACKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11149-PE | 475 | CG11149-PE | 1..475 | 1..475 | 2528 | 100 | Plus |
CG11149-PD | 475 | CG11149-PD | 1..475 | 1..475 | 2528 | 100 | Plus |
CG11149-PC | 475 | CG11149-PC | 1..475 | 1..475 | 2528 | 100 | Plus |
CG11149-PA | 493 | CG11149-PA | 1..493 | 1..475 | 2499 | 96.3 | Plus |
CG11149-PB | 493 | CG11149-PB | 1..493 | 1..475 | 2499 | 96.3 | Plus |