BDGP Sequence Production Resources |
Search the DGRC for RE65495
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 654 |
Well: | 95 |
Vector: | pFlc-1 |
Associated Gene/Transcript | pon-RA |
Protein status: | RE65495.pep: gold |
Preliminary Size: | 2013 |
Sequenced Size: | 2605 |
Gene | Date | Evidence |
---|---|---|
CG3346 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3346 | 2002-01-03 | Blastp of sequenced clone |
pon | 2008-04-29 | Release 5.5 accounting |
pon | 2008-08-15 | Release 5.9 accounting |
pon | 2008-12-18 | 5.12 accounting |
2605 bp (2605 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075515
> RE65495.complete AAAAAAATGGCATTTGGTGTCGTACTGCGTTGTTTATAATTGCTCCTCGC TGCTCTAGAAAAACAATTTGAATCTGATTAAAGAAACTTAAGATATACAC ATCGACTTGTGATCGACTGAATAATGCTGGAGACGAAGAGCATAGCTGCA TTGGCTTTCACGGAGACGCCGCGCAAACGCAAAAGGGAGACGCTCTATAA AAATGCTGCCCCGCCCCCGAATCCGCAGCAACAACCCCCAGAAAAGGACG CACAGGATGCAGCTGTCGCGTCGACAGAATCCTGCTTCACCAACGCCGCC TTCAGTTCCACGCCCAAGAAGCTAATGGTGGCTCGTCGTCGTTTGGCCAA GGAGAATAGCCAACCCAATCCGTTTCCCGGCTTGGAGGTCAAGTCCATAG CTGATCTGGCCCAGAAGCAGCAGCACCAGCAGCATCATCAGCAGCAGCAA CAACAACAACAAAAGCTACCCACGAATCCTTTTGAGGTCCTGCGCCAGCC GCCCAAGAAGAAGAAGCGCGAGCATGCCTGCTTCGAGAATCCTGGCCTGA ATTTGGAGCTGCCCGAGAAGCAGTTCAATCCATATGAGGTCGTCCGCTCG GCAACCACGCCCGCCAAGGGCTTCGTGAATCCTGCCCTGAATTTGCGCGG CAGTGATGCGCCGGCCTCGCTCAATCCCTTCGAGATCCATCGGCCCAGCG AGGCGTCCGAGGCAGCCTGCAATCCCTCGGGTGTGGCCAATCCGGCACTG GCCGATAGGGATTCGGAGGAGCAGCTGCCCACCAGCCTGAAGATCGGCTT GCCATTCACGCCAACGCTGGGCTGTCGCATCGATTTTCACGGCATGTCCC TTACGCAGCTAACGCCTAGCAAGCTGCTGGCCGAGAAGCTGGTCTTTTCG CCCGTTCCGGCGCCCAAACGATCGCTGGGCGCCATCAGCGAGGAGTCGTC TATGGACATTGGCAAGGAGCTGGATCGCTATCAACTGGAATTGGAGAACA GCATCAACGAGGCGAAGCTACGGAAGAATGGCGTGCTGGTGGATAGAGAG TTGCCCAGGAATAGCTTGGAGGTGGAACTGCCCAAGAACACCAAGGTCTC CTTGGTCATGGAGACCAATACGCAGGAGCTGATGATGCAGGAAGTGGTGA CGGTGGACACTCAAGTGGAGAGGCGTCTGGTTTGCACCAGACGACGCACA CTAACCGAGATTAGCGAGGCTTCCGAGGTGGAAGAGGACACGGAGAAGCT GCTCGAGCAGGACCGCGAAGCAGAGGTGATTCTCGAGCAGGAGAAGATTC TAGAGCAGGAGATGGTCTCAGAGCGGGAACGACATTTAACGAGGGAGAAG CAATTGAAGCAGGAGAAACTCCTAGAGAGGGAAAAACATTTGGAGCGAGA GAAGCTGCAGGAGAAGCTGCACGAGCAGCTCAGGGAAAAGCTCCAGGAGA GGGCCAAGCACCTGGAGAAGGAGAAGCTGGAGGAGGAGGAGCTCCTGGAA AGGCAGCTAGAAGAGGAACGGGAAAAGGAGCCAACCGACGGCGATGTGGC CTATGCCTCCGAATCCGAATCCGACGACGAGCCCGATGATCTAGACTTCA AGGCACCCGCGCGCTTCGTTCGCGCCTACAGACCCGCCGCTCTGCCCTCC AAGGCGGCCAGCAAGGAGTCGCTGCAGTCCATCGGATCAAGCAAGTCCGC CAAATCGGCAGAAGTTAAGCCCAGTATCGGAATGAAAGGCATGATAAGAA AGTCCATTCGAAGACTGATGCATCCCACGTCGCACACCACGCCATCCGAG GTAAAGTCCGAGGACAAGGATGAACATGGACATGGACAGGGCCATGGACA GCACAACATACTCAATAGCATTCGGCACAGCCTGCGCAGGAGGCCACAAA AGGCGGCCGAGTTGGAGGAGCAAATGGAGCCCGTTCTCGCCGACGTCTCC ATTATCGACACCAGCGAACGGACCATGAAGCTCCGCTCGAGCGTTGCCCA AACCGAGTACATGACCATCGAGCAGCTGACCAACGAGAAGAAGCACTCAC TGCGGAACAGCATTAGGCGGTCCACGCGGGACGTGCTGCGCCATGTGTTC CACAAGAGTCACGATGCCTATGCAACCGCCAAGTGAGCAGGTTGGCTCCA CAGATTCAATTGGTGCGTCGATTTTTAGGGGATTTCAAATGGCATTTCTG TAACCGAAAGCATTTAAATTTATTTGTTATTATTTTTGAAATGCGCCTTC CCCTTGTTGAATTGACCCAATTGACTTCTTTTCAATTCGATTTTTCAGCA CCTAGTTAAGTTTTTAATTGCACCCAAAGATTGTCACACAAGACCAGCGA AAAAAGGAAAGGAAACCTTATTTCATCTGAAAACCACATCATCACCTAGT TTTTAATCAAGTTTTTTTTCTTAATTTTTCAAGCGAACTCTGCAAATTAA TTTGCACACTGTTTATAGTTTTAAGTTACTTGATGTTTGCACGTTTATTC ATATATGTATGTATGTATGTTTGCCCATATATCTTTATATATATATATAT ATATGCTTTCTAATATATATAACATTTGTTTTTTTATACAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 4529901..4531889 | 587..2589 | 9585 | 98.8 | Plus |
chrX | 22417052 | chrX | 4529125..4529711 | 4..590 | 2920 | 99.8 | Plus |
chrX | 22417052 | chrX | 9909251..9909296 | 416..461 | 185 | 93.5 | Plus |
chr3L | 24539361 | chr3L | 14017831..14017882 | 462..411 | 185 | 90.4 | Minus |
chr3L | 24539361 | chr3L | 14741587..14741638 | 467..416 | 185 | 90.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 4637110..4639117 | 587..2594 | 10010 | 99.9 | Plus |
X | 23542271 | X | 4636333..4636919 | 4..590 | 2935 | 100 | Plus |
X | 23542271 | X | 10017616..10017661 | 416..461 | 185 | 93.5 | Plus |
3L | 28110227 | 3L | 14027758..14027809 | 462..411 | 185 | 90.4 | Minus |
3L | 28110227 | 3L | 14751472..14751523 | 467..416 | 185 | 90.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2436 | 395..466 | 209 | 78.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2355..2409 | 412..466 | 185 | 81.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2783..2835 | 417..469 | 184 | 83 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2355 | 413..466 | 162 | 77.8 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3279..3323 | 418..462 | 144 | 80 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2434..2476 | 419..461 | 143 | 81.4 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7162..7235 | 399..466 | 141 | 72.4 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 8615..8688 | 399..466 | 141 | 72.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2943..2997 | 418..469 | 133 | 74.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 4529590..4529709 | 469..588 | 100 | -> | Plus |
chrX | 4529122..4529533 | 1..412 | 99 | == | Plus |
chrX | 4529903..4530654 | 589..1340 | 99 | == | Plus |
chrX | 4530806..4531802 | 1492..2500 | 98 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pon-RA | 1..2013 | 124..2136 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pon-RA | 1..2013 | 124..2136 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pon-RA | 1..2013 | 124..2136 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pon-RA | 1..2013 | 124..2136 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pon-RA | 1..2013 | 124..2136 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pon-RA | 4..2589 | 4..2589 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pon-RA | 4..2589 | 4..2589 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pon-RA | 13..2601 | 1..2589 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pon-RA | 4..2589 | 4..2589 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pon-RA | 13..2601 | 1..2589 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4636330..4636917 | 1..588 | 99 | -> | Plus |
X | 4637112..4639112 | 589..2589 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4636330..4636917 | 1..588 | 99 | -> | Plus |
X | 4637112..4639112 | 589..2589 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4636330..4636917 | 1..588 | 99 | -> | Plus |
X | 4637112..4639112 | 589..2589 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 4530363..4530950 | 1..588 | 99 | -> | Plus |
arm_X | 4531145..4533145 | 589..2589 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4644428..4645015 | 1..588 | 99 | -> | Plus |
X | 4645210..4647210 | 589..2589 | 99 | Plus |
Translation from 123 to 2135
> RE65495.pep MLETKSIAALAFTETPRKRKRETLYKNAAPPPNPQQQPPEKDAQDAAVAS TESCFTNAAFSSTPKKLMVARRRLAKENSQPNPFPGLEVKSIADLAQKQQ HQQHHQQQQQQQQKLPTNPFEVLRQPPKKKKREHACFENPGLNLELPEKQ FNPYEVVRSATTPAKGFVNPALNLRGSDAPASLNPFEIHRPSEASEAACN PSGVANPALADRDSEEQLPTSLKIGLPFTPTLGCRIDFHGMSLTQLTPSK LLAEKLVFSPVPAPKRSLGAISEESSMDIGKELDRYQLELENSINEAKLR KNGVLVDRELPRNSLEVELPKNTKVSLVMETNTQELMMQEVVTVDTQVER RLVCTRRRTLTEISEASEVEEDTEKLLEQDREAEVILEQEKILEQEMVSE RERHLTREKQLKQEKLLEREKHLEREKLQEKLHEQLREKLQERAKHLEKE KLEEEELLERQLEEEREKEPTDGDVAYASESESDDEPDDLDFKAPARFVR AYRPAALPSKAASKESLQSIGSSKSAKSAEVKPSIGMKGMIRKSIRRLMH PTSHTTPSEVKSEDKDEHGHGQGHGQHNILNSIRHSLRRRPQKAAELEEQ MEPVLADVSIIDTSERTMKLRSSVAQTEYMTIEQLTNEKKHSLRNSIRRS TRDVLRHVFHKSHDAYATAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21417-PA | 657 | GF21417-PA | 1..657 | 1..670 | 2018 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18716-PA | 656 | GG18716-PA | 1..656 | 1..670 | 2678 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17884-PA | 582 | GH17884-PA | 1..305 | 1..307 | 1042 | 70.2 | Plus |
Dgri\GH17884-PA | 582 | GH17884-PA | 375..579 | 473..669 | 489 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pon-PA | 670 | CG3346-PA | 1..670 | 1..670 | 3392 | 100 | Plus |
Trf2-PI | 1714 | CG18009-PI | 770..958 | 255..466 | 180 | 30.3 | Plus |
Trf2-PE | 1715 | CG18009-PE | 771..959 | 255..466 | 180 | 30.3 | Plus |
Trf2-PF | 1715 | CG18009-PF | 771..959 | 255..466 | 180 | 30.3 | Plus |
Trf2-PG | 1715 | CG18009-PG | 771..959 | 255..466 | 180 | 30.3 | Plus |
rudhira-PE | 2075 | CG43154-PE | 1154..1635 | 96..644 | 177 | 22.6 | Plus |
rudhira-PC | 2075 | CG43154-PC | 1154..1635 | 96..644 | 177 | 22.6 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3584..4247 | 3..639 | 169 | 17.9 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3623..4286 | 3..639 | 169 | 17.9 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3584..4247 | 3..639 | 169 | 17.9 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 3623..4286 | 3..639 | 169 | 17.9 | Plus |
Trf2-PI | 1714 | CG18009-PI | 822..1045 | 281..503 | 165 | 29.5 | Plus |
Trf2-PE | 1715 | CG18009-PE | 823..1046 | 281..503 | 165 | 29.5 | Plus |
Trf2-PF | 1715 | CG18009-PF | 823..1046 | 281..503 | 165 | 29.5 | Plus |
Trf2-PG | 1715 | CG18009-PG | 823..1046 | 281..503 | 165 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16456-PA | 655 | GI16456-PA | 441..655 | 453..670 | 477 | 61.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18584-PA | 157 | GL18584-PA | 1..157 | 1..158 | 448 | 67.3 | Plus |
Dper\GL14758-PA | 118 | GL14758-PA | 20..93 | 576..652 | 247 | 68.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27120-PA | 564 | GA27120-PA | 1..341 | 1..370 | 1134 | 69.2 | Plus |
Dpse\GA27120-PA | 564 | GA27120-PA | 200..564 | 302..670 | 582 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12356-PA | 665 | GM12356-PA | 1..665 | 1..670 | 2961 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16699-PA | 654 | GD16699-PA | 1..654 | 1..670 | 3245 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15857-PA | 572 | GJ15857-PA | 1..572 | 1..670 | 1576 | 59.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16161-PA | 601 | GK16161-PA | 1..347 | 1..360 | 1028 | 60.8 | Plus |
Dwil\GK16161-PA | 601 | GK16161-PA | 389..601 | 473..670 | 492 | 58.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16355-PA | 655 | GE16355-PA | 1..655 | 1..670 | 2633 | 83.1 | Plus |
Translation from 123 to 2135
> RE65495.hyp MLETKSIAALAFTETPRKRKRETLYKNAAPPPNPQQQPPEKDAQDAAVAS TESCFTNAAFSSTPKKLMVARRRLAKENSQPNPFPGLEVKSIADLAQKQQ HQQHHQQQQQQQQKLPTNPFEVLRQPPKKKKREHACFENPGLNLELPEKQ FNPYEVVRSATTPAKGFVNPALNLRGSDAPASLNPFEIHRPSEASEAACN PSGVANPALADRDSEEQLPTSLKIGLPFTPTLGCRIDFHGMSLTQLTPSK LLAEKLVFSPVPAPKRSLGAISEESSMDIGKELDRYQLELENSINEAKLR KNGVLVDRELPRNSLEVELPKNTKVSLVMETNTQELMMQEVVTVDTQVER RLVCTRRRTLTEISEASEVEEDTEKLLEQDREAEVILEQEKILEQEMVSE RERHLTREKQLKQEKLLEREKHLEREKLQEKLHEQLREKLQERAKHLEKE KLEEEELLERQLEEEREKEPTDGDVAYASESESDDEPDDLDFKAPARFVR AYRPAALPSKAASKESLQSIGSSKSAKSAEVKPSIGMKGMIRKSIRRLMH PTSHTTPSEVKSEDKDEHGHGQGHGQHNILNSIRHSLRRRPQKAAELEEQ MEPVLADVSIIDTSERTMKLRSSVAQTEYMTIEQLTNEKKHSLRNSIRRS TRDVLRHVFHKSHDAYATAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pon-PA | 670 | CG3346-PA | 1..670 | 1..670 | 3392 | 100 | Plus |
Trf2-PI | 1714 | CG18009-PI | 770..958 | 255..466 | 180 | 30.3 | Plus |
Trf2-PE | 1715 | CG18009-PE | 771..959 | 255..466 | 180 | 30.3 | Plus |
Trf2-PF | 1715 | CG18009-PF | 771..959 | 255..466 | 180 | 30.3 | Plus |
Trf2-PG | 1715 | CG18009-PG | 771..959 | 255..466 | 180 | 30.3 | Plus |
Trf2-PI | 1714 | CG18009-PI | 822..1045 | 281..503 | 165 | 29.5 | Plus |
Trf2-PE | 1715 | CG18009-PE | 823..1046 | 281..503 | 165 | 29.5 | Plus |
Trf2-PF | 1715 | CG18009-PF | 823..1046 | 281..503 | 165 | 29.5 | Plus |