BDGP Sequence Production Resources |
Search the DGRC for RE65881
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 658 |
Well: | 81 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG30022-RB |
Protein status: | RE65881.pep: gold |
Sequenced Size: | 1357 |
Gene | Date | Evidence |
---|---|---|
CG30022 | 2004-03-31 | Blastp of sequenced clone |
CG30022 | 2008-04-29 | Release 5.5 accounting |
CG30022 | 2008-08-15 | Release 5.9 accounting |
CG30022 | 2008-12-18 | 5.12 accounting |
1357 bp (1357 high quality bases) assembled on 2004-03-31
GenBank Submission: BT012447
> RE65881.complete AGTTGAACTCAACACTTCAGCTGATGTGCCGTGATGTTTTCATTTTTCTG TGTTCCTCAAACTTTGTTTATTGCTGTGTAAATTTTACCGAATACTCTTT TATTTGTTTGTAAATACAATTTCGCGAGTGATATGCTTTAGCTCTGATCA AGTGTATATTTTGTGATAATCAAAAGACTGTAATCGCAACAAAAAAAAAA ATGCTCAATTAACAGTAATTTATTAAATTAGGAACTTTATCAGGTGCCAT AAGCTAGCTCAATAGTGATTAACCAAGAATAAGAAAGTGCAACAACAATA ATCGAGTATCGCATTCAAGGGGTAAATAGAAATCTACACGAGGCAAATAA TTACACACGAAGCGTATCTATCGCGTATACGAACCTCAATCAGATAGAAA TACGAGTCCAAAATGAGAATAGTTGGATCCAGTATGCTGGCAGCCCTCAA GCGGCTATCAACGAACCAACCCCCCACCTTGGTCAGTAACATCCGGTACC TGAGCTCGTTTGGAACCATGAGCCTGCCGGAGCGCCAGCCCTTTTCTCCA GACTTCTTCTTCCGTCAACTTTTTGATGGAGAAAGCAGCACCTATAGCTA CCTTCTGGCCGATCTAAAGAATGGTCAGGCCGTAATCATTGATCCTGTTT TGGAGCAGGCGAAACGAGATGCCCAGCTGGTCAAGGATCTGGGCTTCGAG TTGAAGTATGCCATCAACACACACATGCATGCGGATCACATAACGGGCAG TGGCTGGTTGAGGAAGTTAACTGGGTGTCAATCTGTGATTGCTGCCGCCA GTGGAGCCAAGGCGGATCGTCACCTGAATGAAGGGGATCGCATAGATTTC GGCACCCATGTGATTGATGCTCTGGCCACTCCGGGACACACAAATGGCTG CATGACCTATGTGATCAAGGATCAGGGTTGTGTCTTTACCGGAGATACTC TCCTGATACGAGGCTGTGGACGCACCGATTTCCAGGAAGGCTGCCCACGT AATCTCTACGAGAATGTGCACAGTAAGATCTTCACACTCCCGGAAAACTT TCGCATATATCCGGCGCACGACTATAAAGGTCAAATGGAAAGCAGTGTGT GGGAGGAGAAGCGGTATAACCCCAGACTGACTAAGGATATTGAAGAGTTT GTCAAAATCATGGAAAACCTAAATTTACCATATCCCAAGAAAATAGATGC CTCGCTGCCCGCCAATCGAGAGTGCGGGGTGTACGATATACCCAAGGAAT AATTCCAACCCCTGCAAACACTATATACGCAGCTTATATAATAATGTTTC AAAGAGACTTGTAATCTTTTAAATAAATAATCATAATAATCCTAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30022-RB | 1474 | CG30022-RB | 82..1422 | 1..1341 | 6690 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 7275650..7276214 | 568..1 | 2715 | 98.9 | Minus |
chr2R | 21145070 | chr2R | 7274987..7275350 | 1077..714 | 1820 | 100 | Minus |
chr2R | 21145070 | chr2R | 7274613..7274760 | 1341..1194 | 740 | 100 | Minus |
chr2R | 21145070 | chr2R | 7275442..7275590 | 713..565 | 715 | 98.7 | Minus |
chr2R | 21145070 | chr2R | 7274814..7274932 | 1196..1078 | 595 | 100 | Minus |
chr2RHet | 3288813 | chr2RHet | 1142464..1142582 | 1078..1196 | 565 | 98.3 | Plus |
chr2RHet | 3288813 | chr2RHet | 1576573..1576691 | 1078..1196 | 565 | 98.3 | Plus |
chr2RHet | 3288813 | chr2RHet | 1142167..1142302 | 565..700 | 455 | 89 | Plus |
chr2RHet | 3288813 | chr2RHet | 1142312..1142409 | 980..1077 | 445 | 96.9 | Plus |
chr2RHet | 3288813 | chr2RHet | 1576328..1576438 | 565..675 | 420 | 91.9 | Plus |
chr2RHet | 3288813 | chr2RHet | 1576433..1576518 | 992..1077 | 400 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 11388208..11388775 | 568..1 | 2825 | 99.8 | Minus |
2R | 25286936 | 2R | 11387545..11387908 | 1077..714 | 1820 | 100 | Minus |
2R | 25286936 | 2R | 11387171..11387318 | 1341..1194 | 740 | 100 | Minus |
2R | 25286936 | 2R | 11388000..11388148 | 713..565 | 730 | 99.3 | Minus |
2R | 25286936 | 2R | 11387372..11387490 | 1196..1078 | 595 | 100 | Minus |
2R | 25286936 | 2R | 2374937..2375055 | 1078..1196 | 565 | 98.3 | Plus |
2R | 25286936 | 2R | 2801494..2801612 | 1078..1196 | 565 | 98.3 | Plus |
2R | 25286936 | 2R | 2374640..2374775 | 565..700 | 455 | 89 | Plus |
2R | 25286936 | 2R | 2374785..2374882 | 980..1077 | 445 | 96.9 | Plus |
2R | 25286936 | 2R | 2801249..2801359 | 565..675 | 420 | 91.9 | Plus |
2R | 25286936 | 2R | 2801354..2801439 | 992..1077 | 400 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 11389407..11389974 | 568..1 | 2825 | 99.8 | Minus |
2R | 25260384 | 2R | 11388744..11389107 | 1077..714 | 1820 | 100 | Minus |
2R | 25260384 | 2R | 11388370..11388517 | 1341..1194 | 740 | 100 | Minus |
2R | 25260384 | 2R | 11389199..11389347 | 713..565 | 730 | 99.3 | Minus |
2R | 25260384 | 2R | 11388571..11388689 | 1196..1078 | 595 | 100 | Minus |
2R | 25260384 | 2R | 2374937..2375055 | 1078..1196 | 565 | 98.3 | Plus |
2R | 25260384 | 2R | 2801494..2801612 | 1078..1196 | 565 | 98.3 | Plus |
2R | 25260384 | 2R | 2374640..2374775 | 565..700 | 455 | 88.9 | Plus |
2R | 25260384 | 2R | 2374785..2374882 | 980..1077 | 445 | 96.9 | Plus |
2R | 25260384 | 2R | 2801249..2801359 | 565..675 | 420 | 91.8 | Plus |
2R | 25260384 | 2R | 2801354..2801439 | 992..1077 | 400 | 97.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7275442..7275586 | 569..713 | 99 | <- | Minus |
chr2R | 7274814..7274932 | 1078..1196 | 100 | <- | Minus |
chr2R | 7274987..7275350 | 714..1077 | 100 | <- | Minus |
chr2R | 7274611..7274757 | 1197..1343 | 99 | <- | Minus |
chr2R | 7275650..7276214 | 1..568 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30022-RB | 1..840 | 413..1252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30022-RB | 1..840 | 413..1252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30022-RB | 1..840 | 413..1252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30022-RB | 1..840 | 413..1252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30022-RB | 1..840 | 413..1252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30022-RB | 3..1344 | 1..1343 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30022-RB | 3..1344 | 1..1343 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30022-RB | 5..1346 | 1..1343 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30022-RB | 3..1344 | 1..1343 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30022-RB | 5..1346 | 1..1343 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11387169..11387315 | 1197..1343 | 99 | <- | Minus |
2R | 11387372..11387490 | 1078..1196 | 100 | <- | Minus |
2R | 11387545..11387908 | 714..1077 | 100 | <- | Minus |
2R | 11388000..11388144 | 569..713 | 100 | <- | Minus |
2R | 11388208..11388775 | 1..568 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11387169..11387315 | 1197..1343 | 99 | <- | Minus |
2R | 11387372..11387490 | 1078..1196 | 100 | <- | Minus |
2R | 11387545..11387908 | 714..1077 | 100 | <- | Minus |
2R | 11388000..11388144 | 569..713 | 100 | <- | Minus |
2R | 11388208..11388775 | 1..568 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11387169..11387315 | 1197..1343 | 99 | <- | Minus |
2R | 11387372..11387490 | 1078..1196 | 100 | <- | Minus |
2R | 11387545..11387908 | 714..1077 | 100 | <- | Minus |
2R | 11388000..11388144 | 569..713 | 100 | <- | Minus |
2R | 11388208..11388775 | 1..568 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7274674..7274820 | 1197..1343 | 99 | <- | Minus |
arm_2R | 7274877..7274995 | 1078..1196 | 100 | <- | Minus |
arm_2R | 7275050..7275413 | 714..1077 | 100 | <- | Minus |
arm_2R | 7275505..7275649 | 569..713 | 100 | <- | Minus |
arm_2R | 7275713..7276280 | 1..568 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11388744..11389107 | 714..1077 | 100 | <- | Minus |
2R | 11389199..11389343 | 569..713 | 100 | <- | Minus |
2R | 11389407..11389974 | 1..568 | 99 | Minus | |
2R | 11388368..11388514 | 1197..1343 | 99 | <- | Minus |
2R | 11388571..11388689 | 1078..1196 | 100 | <- | Minus |
Translation from 412 to 1251
> RE65881.pep MRIVGSSMLAALKRLSTNQPPTLVSNIRYLSSFGTMSLPERQPFSPDFFF RQLFDGESSTYSYLLADLKNGQAVIIDPVLEQAKRDAQLVKDLGFELKYA INTHMHADHITGSGWLRKLTGCQSVIAAASGAKADRHLNEGDRIDFGTHV IDALATPGHTNGCMTYVIKDQGCVFTGDTLLIRGCGRTDFQEGCPRNLYE NVHSKIFTLPENFRIYPAHDYKGQMESSVWEEKRYNPRLTKDIEEFVKIM ENLNLPYPKKIDASLPANRECGVYDIPKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12395-PA | 657 | GF12395-PA | 27..195 | 53..221 | 881 | 92.3 | Plus |
Dana\GF10361-PA | 305 | GF10361-PA | 59..225 | 61..224 | 210 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22649-PA | 660 | GG22649-PA | 27..195 | 53..221 | 930 | 97.6 | Plus |
Dere\GG16137-PA | 348 | GG16137-PA | 102..268 | 61..224 | 213 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20506-PA | 698 | GH20506-PA | 27..195 | 53..221 | 813 | 84.6 | Plus |
Dgri\GH16754-PA | 303 | GH16754-PA | 59..223 | 61..224 | 205 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30022-PB | 279 | CG30022-PB | 1..279 | 1..279 | 1479 | 100 | Plus |
tzn-PB | 271 | CG4365-PB | 25..188 | 61..221 | 209 | 32.1 | Plus |
tzn-PA | 305 | CG4365-PA | 59..222 | 61..221 | 209 | 32.1 | Plus |
tzn-PC | 348 | CG4365-PC | 102..265 | 61..221 | 209 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21050-PA | 859 | GI21050-PA | 27..252 | 53..278 | 1121 | 87.2 | Plus |
Dmoj\GI13415-PA | 301 | GI13415-PA | 55..221 | 61..224 | 212 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10396-PA | 622 | GL10396-PA | 372..622 | 29..279 | 1186 | 84.1 | Plus |
Dper\GL10395-PA | 136 | GL10395-PA | 1..125 | 1..126 | 545 | 82.7 | Plus |
Dper\GL10396-PA | 622 | GL10396-PA | 1..58 | 164..221 | 313 | 91.4 | Plus |
Dper\GL12815-PA | 305 | GL12815-PA | 59..225 | 61..224 | 208 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30464-PA | 296 | GA30464-PA | 1..296 | 1..279 | 1314 | 82.4 | Plus |
Dpse\GA24963-PB | 268 | GA24963-PB | 23..268 | 34..279 | 1169 | 85 | Plus |
Dpse\GA18136-PA | 305 | GA18136-PA | 59..225 | 61..224 | 212 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22320-PA | 348 | GM22320-PA | 102..268 | 61..224 | 213 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25902-PA | 657 | GD25902-PA | 27..195 | 53..221 | 939 | 99.4 | Plus |
Dsim\GD14908-PA | 348 | GD14908-PA | 102..268 | 61..224 | 213 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21974-PA | 673 | GJ21974-PA | 27..195 | 53..221 | 817 | 84.6 | Plus |
Dvir\GJ11540-PA | 305 | GJ11540-PA | 59..225 | 61..224 | 219 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21885-PA | 847 | GK21885-PA | 27..252 | 53..278 | 1088 | 83.6 | Plus |
Dwil\GK10504-PA | 308 | GK10504-PA | 59..228 | 61..224 | 205 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13523-PA | 658 | GE13523-PA | 27..195 | 53..221 | 931 | 97.6 | Plus |
Dyak\GE19704-PA | 348 | GE19704-PA | 102..268 | 61..224 | 212 | 31 | Plus |
Dyak\GE19707-PA | 348 | GE19707-PA | 102..268 | 61..224 | 212 | 31 | Plus |
Translation from 412 to 1251
> RE65881.hyp MRIVGSSMLAALKRLSTNQPPTLVSNIRYLSSFGTMSLPERQPFSPDFFF RQLFDGESSTYSYLLADLKNGQAVIIDPVLEQAKRDAQLVKDLGFELKYA INTHMHADHITGSGWLRKLTGCQSVIAAASGAKADRHLNEGDRIDFGTHV IDALATPGHTNGCMTYVIKDQGCVFTGDTLLIRGCGRTDFQEGCPRNLYE NVHSKIFTLPENFRIYPAHDYKGQMESSVWEEKRYNPRLTKDIEEFVKIM ENLNLPYPKKIDASLPANRECGVYDIPKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30022-PB | 279 | CG30022-PB | 1..279 | 1..279 | 1479 | 100 | Plus |
CG4365-PB | 271 | CG4365-PB | 25..188 | 61..221 | 209 | 32.1 | Plus |
CG4365-PA | 305 | CG4365-PA | 59..222 | 61..221 | 209 | 32.1 | Plus |
CG4365-PC | 348 | CG4365-PC | 102..265 | 61..221 | 209 | 32.1 | Plus |