BDGP Sequence Production Resources |
Search the DGRC for RE66133
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 661 |
Well: | 33 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG12963-RB |
Protein status: | RE66133.pep: wuzgold |
Sequenced Size: | 1194 |
Gene | Date | Evidence |
---|---|---|
CG12963 | 2004-03-31 | Blastp of sequenced clone |
CG12963 | 2008-04-29 | Release 5.5 accounting |
CG12963 | 2008-08-15 | Release 5.9 accounting |
CG12963 | 2008-12-18 | 5.12 accounting |
1194 bp (1194 high quality bases) assembled on 2004-03-31
GenBank Submission: BT012448
> RE66133.complete ACTTTTTGGCCAGTCTTCGAGAATTGCGGAATGGGTCTGACAGCTAATCT GAGCGTCGCGCTGGGCTTTGTGTTTTGCATGTTCGCGGTGGCCCAGCTTA TATACCTGGCCAAGCGAATGCACGACTCAAGGATTCGAAATCGTCGCCAG ATACAAGCTGGTATGGAACATAGCCCATTTGGGTCACACTGGTAGAAATA TTATCCTCAAAAGTGTTTATTGTGTGTGTGAAATTTGGAGTGCTAATATG ACTAATCAACTCGTTTTTAGAAGCCCATTTAAAATGTGCTTATCAGGTCG TGTTTAGAGCAGTGTTTCCAATTTTAATTAATTAACGAATAACAAGGTTG TTGTGTGGGTTAATCAAACTGCACATATACAAATATTTCGAAGTGTATAA AACAACTCTCCTTTAAATGACATTACCCAAATATCAATATGATGTAATCA AGTAATCTTTAATTAAATTCTTATCATTCGTCCTATGAGTTTTATATGTT TAAAGACTTCACTATTCACTATTCACTACTCACTTATTTTTCTTAACCTA TTTTCAGATCGTAATGTATTCAACGCACAGGAGGATCCTTCATCGAACCG CTATGGCGACATTTTCTTCATCGAACCCGGCAGCGTGGAGGCCAACCGCA TTCGCGATCAACTGGAAAAGGATGAAAAGGATTTACCCAGCTACGACGAG GTGATGCGCATGTGTAACCTGACCACTCCCACAGCAGCAGCGGCTGGAAT GCCTGTTCCCCAATCGCCCCTCGGTGTACCCAGTCCCATTGGAATCGCGG CACTGCCGGCGCCACCGTATTCGGAGACAGATCCACATTCCTCGTCCGCC GCAGAAGCCACTGTCATCGCAATGGAACCGATGGAGCCATCCACCTCCCG CGCGGCACAGATTCCACCCAGCTCCGGATCTGGTCCTCCTGCTCCATTGC CAACGACAGCGGTGTGATCCGTCGGAGGCATGGATAAATTGGAACTGAAG CATTCGCCGTGCCACTCTGGGCCACACAGATGCCACTTTGTGTGCGCTTT CAGTACAGAAATGAACTTGTGTGATCTTATTGAGTACATACCTATTTAAG TTCTAGACATTAGGAGTCGCATATTGTAAATATATATTTTTAGGACATAG GATGAAAATTAAAGTGAATTATTTAATTGAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 3427..3468 | 671..630 | 111 | 73.8 | Minus |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 830..874 | 360..405 | 110 | 73.9 | Plus |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 1131..1175 | 360..405 | 110 | 73.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11448328..11448432 | 1..105 | 98 | -> | Plus |
chr2R | 11448515..11449588 | 106..1179 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12963-RB | 1..483 | 485..967 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12963-RB | 1..483 | 485..967 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12963-RN | 123..543 | 547..967 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12963-RB | 1..483 | 485..967 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12963-RN | 123..543 | 547..967 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12963-RB | 1..1179 | 1..1179 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12963-RB | 1..1179 | 1..1179 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12963-RN | 189..821 | 547..1179 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12963-RB | 1..1179 | 1..1179 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12963-RN | 189..821 | 547..1179 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15561363..15562436 | 106..1179 | 100 | Plus | |
2R | 15561176..15561280 | 1..105 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15561363..15562436 | 106..1179 | 100 | Plus | |
2R | 15561176..15561280 | 1..105 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15561363..15562436 | 106..1179 | 100 | Plus | |
2R | 15561176..15561280 | 1..105 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11448681..11448785 | 1..105 | 100 | -> | Plus |
arm_2R | 11448868..11449941 | 106..1179 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15562562..15563635 | 106..1179 | 100 | Plus | |
2R | 15562375..15562479 | 1..105 | 100 | -> | Plus |
Translation from 484 to 966
> RE66133.pep MSFICLKTSLFTIHYSLIFLNLFSDRNVFNAQEDPSSNRYGDIFFIEPGS VEANRIRDQLEKDEKDLPSYDEVMRMCNLTTPTAAAAGMPVPQSPLGVPS PIGIAALPAPPYSETDPHSSSAAEATVIAMEPMEPSTSRAAQIPPSSGSG PPAPLPTTAV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11144-PA | 191 | GF11144-PA | 26..173 | 3..143 | 437 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20536-PA | 307 | GG20536-PA | 172..307 | 26..160 | 548 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19971-PA | 172 | GH19971-PA | 56..164 | 30..140 | 248 | 55 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12963-PM | 176 | CG12963-PM | 37..176 | 21..160 | 714 | 98.6 | Plus |
CG12963-PC | 178 | CG12963-PC | 42..178 | 24..160 | 710 | 100 | Plus |
CG12963-PG | 213 | CG12963-PG | 73..213 | 20..160 | 710 | 97.2 | Plus |
CG12963-PL | 169 | CG12963-PL | 9..169 | 1..160 | 708 | 88.2 | Plus |
CG12963-PJ | 179 | CG12963-PJ | 43..179 | 24..160 | 707 | 99.3 | Plus |
CG12963-PD | 186 | CG12963-PD | 50..186 | 24..160 | 707 | 99.3 | Plus |
CG12963-PA | 190 | CG12963-PA | 43..190 | 13..160 | 707 | 91.9 | Plus |
CG12963-PH | 197 | CG12963-PH | 61..197 | 24..160 | 707 | 99.3 | Plus |
CG12963-PN | 180 | CG12963-PN | 45..180 | 25..160 | 706 | 100 | Plus |
CG12963-PK | 200 | CG12963-PK | 65..200 | 25..160 | 706 | 100 | Plus |
CG12963-PE | 203 | CG12963-PE | 68..203 | 25..160 | 706 | 100 | Plus |
CG12963-PF | 208 | CG12963-PF | 73..208 | 25..160 | 706 | 100 | Plus |
CG12963-PI | 179 | CG12963-PI | 43..179 | 24..160 | 703 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20257-PA | 258 | GI20257-PA | 147..256 | 38..143 | 288 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20080-PA | 201 | GL20080-PA | 26..196 | 3..159 | 373 | 58.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11943-PA | 201 | GA11943-PA | 26..196 | 3..159 | 389 | 58.3 | Plus |
Dpse\GA11943-PH | 204 | GA11943-PH | 29..199 | 3..159 | 389 | 58.3 | Plus |
Dpse\GA11943-PG | 180 | GA11943-PG | 11..175 | 3..159 | 387 | 58.2 | Plus |
Dpse\GA11943-PF | 193 | GA11943-PF | 53..188 | 29..159 | 387 | 65.7 | Plus |
Dpse\GA11943-PE | 190 | GA11943-PE | 15..185 | 3..159 | 386 | 56.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21627-PA | 190 | GM21627-PA | 26..190 | 3..160 | 666 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11129-PA | 190 | GD11129-PA | 26..190 | 3..160 | 679 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20211-PA | 171 | GJ20211-PA | 44..170 | 18..144 | 335 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23031-PA | 206 | GK23031-PA | 43..192 | 13..149 | 326 | 56 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11720-PA | 424 | GE11720-PA | 289..424 | 25..160 | 544 | 89 | Plus |
Translation from 484 to 966
> RE66133.hyp MSFICLKTSLFTIHYSLIFLNLFSDRNVFNAQEDPSSNRYGDIFFIEPGS VEANRIRDQLEKDEKDLPSYDEVMRMCNLTTPTAAAAGMPVPQSPLGVPS PIGIAALPAPPYSETDPHSSSAAEATVIAMEPMEPSTSRAAQIPPSSGSG PPAPLPTTAV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12963-PM | 176 | CG12963-PM | 37..176 | 21..160 | 714 | 98.6 | Plus |
CG12963-PC | 178 | CG12963-PC | 42..178 | 24..160 | 710 | 100 | Plus |
CG12963-PG | 213 | CG12963-PG | 73..213 | 20..160 | 710 | 97.2 | Plus |
CG12963-PL | 169 | CG12963-PL | 9..169 | 1..160 | 708 | 88.2 | Plus |
CG12963-PJ | 179 | CG12963-PJ | 43..179 | 24..160 | 707 | 99.3 | Plus |