BDGP Sequence Production Resources |
Search the DGRC for RE66907
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 669 |
Well: | 7 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Fas3-RB |
Protein status: | RE66907.pep: gold |
Preliminary Size: | 1521 |
Sequenced Size: | 2098 |
Gene | Date | Evidence |
---|---|---|
CG5803 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5803 | 2002-11-12 | Blastp of sequenced clone |
CG5803 | 2003-01-01 | Sim4 clustering to Release 3 |
Fas3 | 2008-04-29 | Release 5.5 accounting |
Fas3 | 2008-08-15 | Release 5.9 accounting |
Fas3 | 2008-12-18 | 5.12 accounting |
2098 bp (2098 high quality bases) assembled on 2002-11-12
GenBank Submission: AY075516
> RE66907.complete AGTCGTTTGGTAACTGTTGCTCCTATCAGTCGTTCTCTGTCGCTCTTGGA TTGCGTGGGCACATCGGTCGTTCGGCATTTTGGGTTCGGCATTTCGGGAT TTGATATCGTTATTCGTGTCGGAATCGTATAAACCTGCGTCCGTGTGCGT TAGCCGGCCATTGAGCACTATCGCTGCCACTGGCATTTGGCCCACCGTGT GTGTTTACAAGTGTGGCATAATCTTCGATTAGCGCAAACCAACCGATCGG ATATACCCCTTGAAAATAACAAATAATAGCGAGGAGTTAAAAAAGCATCC AAACACACACTGCACACCCCAAAACACACACACACACCCACACGTCACAT AAAAAATATAAACCAGAGCCTCAGCGGCCGTAAAGTGCCACCAAAACGTA CTTGGCCGTATATTTTATGCATGAAAAGCTAAAGCAAGTGCAACCAAACG CCTGAGTGACACCAAGAAAAAAAATTCATACACACATATAAGGAAACCCA AAAAAACAAAACCGGGATTACTTATACGCTCACGCTCAGTAGAAAAAATA CGCGAAGCCAAAGGAAGTCAGCAGCAAAATCATGTCACGGATCGTTTTTA TATGTCTCGCAGCCATCTTAACAGATGCACTCACCTGGGCCCAGGTGAAT GTGGAACCCAACACAGCGCTCCTCAACGAAGGCGATCGCACCGAGCTGCT CTGTCGGTACGGCAGATCCATCAACTACTGCCGCATTGAGATTCCCGGCG AGCAGAAGGTACTCAACCTGTCGCCGGAGTGGAGCAAGACACCCGGATTC ACGTACTTCGGAGCGGGTCTCACGGCCGGACAGTGCGGCGTGAGCATCGA GAGGGTCAAGGCCAGCAACAATGGCCAGGTCAAGTGCAGTCTGGGCGTCG AGGGAGAGGAGCTGTCGGGCACCATCGACCTGGTCGTGGCACTGCGTCCC CAGCAGCCCATCATCGAGCTGTTGTCGCGGCCAAATCGCGAGGGCTACTT CAACGAGGGCACTGAATTCAGGGCCCGCTGCAGCGTTCGCGATGGCCGTC CGCCGGCTAACATCTCGTGGTACATCGACAACATGCCGGCCAACAAGCGC ACCACTCCCCTGGAGGTCATGTCCTCGACCAACGACAACGTGGAGCTATC GACCTCCGTGCAGGAAATCCAGTGGCACCTGTCGCCCGAGGACAGCAACC GGAAACTGGTCTGCCGCTCCCACCACCAAACCGATCGCGAGAGTGTGCCG CCCCAGGAAGCTGCCTACATCATCAACGTGCGCTATGCTCCCGTCCATCA GCCAGATGCCGCCGTGTATGGACTCTACCTCGAGCACACTGCCATTGTGA ACATAACCATCCGCGCCAGTCCGCAGCCCAAGATCGAGTGGACCATCGAT GGAGCTATTGTGGGGCAGGGACGCACCGATGGACGCTACTCGGCGTATGA GCCGCAGTATCTGGGCAACGATGAGTACAACGTTACACTGGCCATTGCCG GACTGACCCTGGAAGATACCACCAAAATCTACAATCTGAGGGCCAGCAAT GAACTGGGACTGACGGACTACCAGGTGCGAATCAGTTCGTCGAGCAAACC GCCCAGCAGCAGCCTCGATGTGGCGGCAATCGTTGGCATTGTGGTCGCCG TTGCCGTTTTGGTCCTGGTCGTTTTACTGATTGTGTTTGCACGGGCTACT GGCCGATGGTGTTTTGGCGGCAAATCAATCAAGACGCCCACAAACGAAAC CAAGACAAACAACTCGTCTATGCTGAACTTGTACTAAAGCCAGCCAATGA GGCGACACCAGCAACAACACCAGCGCCAACAACAGCAGCAGCAACAACAA CAACGCCGGAGGGCTCTGGAGCCGGGGTCAAAAGTTCAACGGAATACGCC GAAATAGTCTATGTGCAAAAGGGAGGCGAAGGAAAAAAATAATCTAGCAC ATCAATATAAAAATCCCTGGGAGGCTGACACAGTAACAAATACAGATGAA TGCACAAAAATTAAGGAGCAGAAACGTAAACACAAACCCAGTGCAGCATA AAAGTAAACTCTACGATGATATTAAGAATGCTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fas3.d | 3306 | Fas3.d | 49..1800 | 1..1752 | 8760 | 100 | Plus |
Fas3.b | 2799 | Fas3.b | 49..1800 | 1..1752 | 8760 | 100 | Plus |
Fas3.g | 2765 | Fas3.g | 25..1776 | 1..1752 | 8760 | 100 | Plus |
Fas3.d | 3306 | Fas3.d | 2104..2457 | 1743..2096 | 1710 | 98.8 | Plus |
Fas3.b | 2799 | Fas3.b | 2104..2457 | 1743..2096 | 1710 | 98.8 | Plus |
Fas3.g | 2765 | Fas3.g | 2155..2504 | 1747..2096 | 1705 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 18318777..18319400 | 1..624 | 3105 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 18383133..18383568 | 1285..1720 | 2180 | 100 | Plus |
chr2L | 23010047 | chr2L | 18382513..18382854 | 943..1284 | 1710 | 100 | Plus |
chr2L | 23010047 | chr2L | 18390919..18391249 | 1751..2081 | 1640 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 18382073..18382393 | 622..942 | 1605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18320107..18320730 | 1..624 | 3120 | 100 | Plus |
2L | 23513712 | 2L | 18384459..18384894 | 1285..1720 | 2180 | 100 | Plus |
2L | 23513712 | 2L | 18383839..18384180 | 943..1284 | 1710 | 100 | Plus |
2L | 23513712 | 2L | 18392245..18392590 | 1751..2096 | 1700 | 99.4 | Plus |
2L | 23513712 | 2L | 18383399..18383719 | 622..942 | 1605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18320107..18320730 | 1..624 | 3120 | 100 | Plus |
2L | 23513712 | 2L | 18384459..18384894 | 1285..1720 | 2180 | 100 | Plus |
2L | 23513712 | 2L | 18383839..18384180 | 943..1284 | 1710 | 100 | Plus |
2L | 23513712 | 2L | 18392245..18392590 | 1751..2096 | 1700 | 99.4 | Plus |
2L | 23513712 | 2L | 18383399..18383719 | 622..942 | 1605 | 100 | Plus |
2L | 23513712 | 2L | 18387286..18387317 | 1719..1750 | 160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 18385961..18385991 | 1720..1750 | 100 | -> | Plus |
chr2L | 18318777..18319400 | 1..624 | 99 | -> | Plus |
chr2L | 18382076..18382393 | 625..942 | 100 | -> | Plus |
chr2L | 18382513..18382854 | 943..1284 | 100 | -> | Plus |
chr2L | 18383133..18383567 | 1285..1719 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fas3-RB | 1..1206 | 582..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fas3-RB | 1..1206 | 582..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fas3-RB | 1..1206 | 582..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fas3-RB | 1..1206 | 582..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fas3-RB | 1..1206 | 582..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fas3-RB | 7..2087 | 1..2082 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fas3-RB | 7..2087 | 1..2082 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fas3-RB | 6..2086 | 1..2082 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fas3-RB | 7..2087 | 1..2082 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fas3-RB | 6..2086 | 1..2082 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18392245..18392575 | 1751..2082 | 99 | Plus | |
2L | 18320107..18320730 | 1..624 | 100 | -> | Plus |
2L | 18383402..18383719 | 625..942 | 100 | -> | Plus |
2L | 18383839..18384180 | 943..1284 | 100 | -> | Plus |
2L | 18384459..18384893 | 1285..1719 | 100 | -> | Plus |
2L | 18387287..18387317 | 1720..1750 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18392245..18392575 | 1751..2082 | 99 | Plus | |
2L | 18320107..18320730 | 1..624 | 100 | -> | Plus |
2L | 18383402..18383719 | 625..942 | 100 | -> | Plus |
2L | 18383839..18384180 | 943..1284 | 100 | -> | Plus |
2L | 18384459..18384893 | 1285..1719 | 100 | -> | Plus |
2L | 18387287..18387317 | 1720..1750 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18392245..18392575 | 1751..2082 | 99 | Plus | |
2L | 18320107..18320730 | 1..624 | 100 | -> | Plus |
2L | 18383402..18383719 | 625..942 | 100 | -> | Plus |
2L | 18383839..18384180 | 943..1284 | 100 | -> | Plus |
2L | 18384459..18384893 | 1285..1719 | 100 | -> | Plus |
2L | 18387287..18387317 | 1720..1750 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 18383402..18383719 | 625..942 | 100 | -> | Plus |
arm_2L | 18320107..18320730 | 1..624 | 100 | -> | Plus |
arm_2L | 18383839..18384180 | 943..1284 | 100 | -> | Plus |
arm_2L | 18384459..18384893 | 1285..1719 | 100 | -> | Plus |
arm_2L | 18387287..18387317 | 1720..1750 | 100 | -> | Plus |
arm_2L | 18392245..18392575 | 1751..2082 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18392245..18392575 | 1751..2082 | 99 | Plus | |
2L | 18320107..18320730 | 1..624 | 100 | -> | Plus |
2L | 18383402..18383719 | 625..942 | 100 | -> | Plus |
2L | 18383839..18384180 | 943..1284 | 100 | -> | Plus |
2L | 18384459..18384893 | 1285..1719 | 100 | -> | Plus |
2L | 18387287..18387317 | 1720..1750 | 100 | -> | Plus |
Translation from 581 to 1786
> RE66907.pep MSRIVFICLAAILTDALTWAQVNVEPNTALLNEGDRTELLCRYGRSINYC RIEIPGEQKVLNLSPEWSKTPGFTYFGAGLTAGQCGVSIERVKASNNGQV KCSLGVEGEELSGTIDLVVALRPQQPIIELLSRPNREGYFNEGTEFRARC SVRDGRPPANISWYIDNMPANKRTTPLEVMSSTNDNVELSTSVQEIQWHL SPEDSNRKLVCRSHHQTDRESVPPQEAAYIINVRYAPVHQPDAAVYGLYL EHTAIVNITIRASPQPKIEWTIDGAIVGQGRTDGRYSAYEPQYLGNDEYN VTLAIAGLTLEDTTKIYNLRASNELGLTDYQVRISSSSKPPSSSLDVAAI VGIVVAVAVLVLVVLLIVFARATGRWCFGGKSIKTPTNETKTNNSSMLNL Y*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15054-PA | 785 | GF15054-PA | 280..668 | 9..396 | 1694 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21115-PA | 509 | GG21115-PA | 1..396 | 1..396 | 2093 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11209-PA | 526 | GH11209-PA | 1..397 | 1..396 | 1714 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fas3-PF | 401 | CG5803-PF | 1..401 | 1..401 | 2079 | 100 | Plus |
Fas3-PB | 401 | CG5803-PB | 1..401 | 1..401 | 2079 | 100 | Plus |
Fas3-PG | 557 | CG5803-PG | 1..396 | 1..396 | 2027 | 98.7 | Plus |
Fas3-PA | 508 | CG5803-PA | 1..396 | 1..396 | 2027 | 98.7 | Plus |
Fas3-PE | 577 | CG5803-PE | 1..391 | 1..391 | 2024 | 99.7 | Plus |
Fas3-PD | 577 | CG5803-PD | 1..391 | 1..391 | 2024 | 99.7 | Plus |
Fas3-PC | 475 | CG5803-PC | 1..385 | 1..385 | 1979 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18132-PA | 526 | GI18132-PA | 1..397 | 1..396 | 1699 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18701-PA | 521 | GL18701-PA | 1..397 | 1..396 | 1768 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19141-PA | 518 | GA19141-PA | 1..397 | 1..396 | 1772 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17274-PA | 401 | GM17274-PA | 1..401 | 1..401 | 2133 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24138-PA | 508 | GD24138-PA | 1..396 | 1..396 | 2093 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17756-PA | 362 | GJ17756-PA | 1..347 | 1..346 | 1576 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15545-PA | 512 | GK15545-PA | 4..400 | 1..396 | 1652 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13188-PA | 508 | GE13188-PA | 1..396 | 1..396 | 2059 | 97.5 | Plus |
Translation from 581 to 1786
> RE66907.hyp MSRIVFICLAAILTDALTWAQVNVEPNTALLNEGDRTELLCRYGRSINYC RIEIPGEQKVLNLSPEWSKTPGFTYFGAGLTAGQCGVSIERVKASNNGQV KCSLGVEGEELSGTIDLVVALRPQQPIIELLSRPNREGYFNEGTEFRARC SVRDGRPPANISWYIDNMPANKRTTPLEVMSSTNDNVELSTSVQEIQWHL SPEDSNRKLVCRSHHQTDRESVPPQEAAYIINVRYAPVHQPDAAVYGLYL EHTAIVNITIRASPQPKIEWTIDGAIVGQGRTDGRYSAYEPQYLGNDEYN VTLAIAGLTLEDTTKIYNLRASNELGLTDYQVRISSSSKPPSSSLDVAAI VGIVVAVAVLVLVVLLIVFARATGRWCFGGKSIKTPTNETKTNNSSMLNL Y*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fas3-PF | 401 | CG5803-PF | 1..401 | 1..401 | 2079 | 100 | Plus |
Fas3-PB | 401 | CG5803-PB | 1..401 | 1..401 | 2079 | 100 | Plus |
Fas3-PA | 508 | CG5803-PA | 1..396 | 1..396 | 2027 | 98.7 | Plus |
Fas3-PG | 557 | CG5803-PG | 1..396 | 1..396 | 2027 | 98.7 | Plus |
Fas3-PE | 577 | CG5803-PE | 1..391 | 1..391 | 2024 | 99.7 | Plus |