BDGP Sequence Production Resources |
Search the DGRC for RE67594
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 675 |
Well: | 94 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG1291-RA |
Protein status: | RE67594.pep: gold |
Preliminary Size: | 1448 |
Sequenced Size: | 1483 |
Gene | Date | Evidence |
---|---|---|
CG1291 | 2001-12-17 | Blastp of sequenced clone |
CG1291 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1291 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1291 | 2008-04-29 | Release 5.5 accounting |
CG1291 | 2008-08-15 | Release 5.9 accounting |
CG1291 | 2008-12-18 | 5.12 accounting |
1483 bp (1483 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071629
> RE67594.complete ATTCATCCTACCACGGTCACACTTTCGGCAATCAGCTGAGAAAATATTTA AAAGTTTTAAATATTAAAAACAAAGGCCCGTAAAGAATGCAAATATTCTG ACCCCGTGGCATAAAAAGAATATAGTCCTAGTTCTAGCATATTGTTTGTA AATTCCTTTACTCCAGACTTCCGGTTGAGACCATGGTTCGAGTTCTGTTC CTCCACCCGGATTTGGGCATCGGAGGAGCTGAGCGACTGGTGGTGGATGC CGCTCTGGCACTCAAGGAGCGGGGTCACCAGGTTAGCTTCCTAACGAATC ACCACGACAGCACGCACTGCTTCAAGGAGACGGCGGACGGCACTTTTCCG GTCCACGTAGTGGGCGACTGGTTGCCACGCGGGCTCTTCGGAAGATTCTA TGCCATCTGTGCCTATCTGCGCATGCTCTATGCGGCGATCTACGCCAGTT TTTTTATGCCCCAGCGGGAGCAAGTGGACGTGGTGGTGTGCGACCTAATC TCTGTGTGCATTCCAGTTCTCCGCTTCGCCCCTCATCGTCCGAAGGTTCT ATTCTACTGCCACTTTCCGGATCAGCTTCTCAGCAGCCGTGAAGGACTGC TAAAGCGGCTGTACCGCCTGCCCATCAACTGGCTGGAGGAGCACACGATC GGTCTAGCAGACAAGGTGCTGGTCAACTCCAAATTTACGCTACGTGTCTT CCAGGACACCTTTCGCCGACTGAGCACGGTGCCGGATGTGCTGTATCCTT CACTGCACACCCAGTACTTTGACCAGATGCAGAAAAAGCTAGAACAGCGG TCTGCTTTACTGGACGAGCCAGTGCATCCGCGAGTACCACTCAACGCCTT TATCTATCTGGACATCAATCGCTACGAGCGCAAGAAGAACCACGCCCTTG CCTTACATTCCCTGCGCCTTCTGGGCGACATGCTGCCCGCCACGGACTTC AAGCGCTGTCGCCTGATCATCGCCGGGGGTTACGACACCAGATGCATGGA AAATGTGGAGCACTTCGCGGAGCTGGAGCACCTTACGGAGGAGTTGAAAC TTCAGGATCACGTTGTGCTGCTACGCTCGCCTACCGACGAGGAGAAATGT CGCCTGCTCTTTGCCGCTCACTGTCTGCTGTATACGCCAGAGAACGAGCA CTTCGGCATTGTGCCGCTGGAGGGCATGTACTGCTCGAAGCCAGTCGTGG CATTAAACAGCGGCGGACCCACTGAAACGGTGGTGAGCACTTCCACTGGC TTTCTGTGCGAAAAGACCGAGAAGAGCTTTGGTGGAGCAATGCTCCAGCT TTTCCGGGACGAGCAGCTGCGTGTAAAGATGGGAGACCAGGGTCACAAAC GGGTGCAGCAAAAGTTCTCTTTCCAAGCATTCGCAGATCGGCTGAACGGC ATTATTAGAGATCTTGTTCCTATCTCCAGGGAGTCGAGTGCTAAGAAAAA TAAATAAAATTCCAACAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1291-RA | 1479 | CG1291-RA | 1..1465 | 1..1465 | 7325 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3143256..3144720 | 1..1465 | 7175 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 3143810..3145274 | 1..1465 | 7325 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 3143810..3145274 | 1..1465 | 7325 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmir\spock | 4952 | Dmir\spock SPOCK 4952bp Derived from AY144571. | 3649..3686 | 716..678 | 111 | 79.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3143256..3144720 | 1..1466 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1291-RA | 1..1275 | 183..1457 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1291-RA | 1..1275 | 183..1457 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1291-RA | 1..1275 | 183..1457 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1291-RA | 1..1275 | 183..1457 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1291-RA | 1..1275 | 183..1457 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1291-RA | 1..1465 | 1..1466 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1291-RA | 1..1465 | 1..1466 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1291-RA | 3..1467 | 1..1466 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1291-RA | 1..1465 | 1..1466 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1291-RA | 3..1467 | 1..1466 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3143810..3145274 | 1..1466 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3143810..3145274 | 1..1466 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3143810..3145274 | 1..1466 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3143810..3145274 | 1..1466 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3143810..3145274 | 1..1466 | 99 | Plus |
Translation from 182 to 1456
> RE67594.hyp MVRVLFLHPDLGIGGAERLVVDAALALKERGHQVSFLTNHHDSTHCFKET ADGTFPVHVVGDWLPRGLFGRFYAICAYLRMLYAAIYASFFMPQREQVDV VVCDLISVCIPVLRFAPHRPKVLFYCHFPDQLLSSREGLLKRLYRLPINW LEEHTIGLADKVLVNSKFTLRVFQDTFRRLSTVPDVLYPSLHTQYFDQMQ KKLEQRSALLDEPVHPRVPLNAFIYLDINRYERKKNHALALHSLRLLGDM LPATDFKRCRLIIAGGYDTRCMENVEHFAELEHLTEELKLQDHVVLLRSP TDEEKCRLLFAAHCLLYTPENEHFGIVPLEGMYCSKPVVALNSGGPTETV VSTSTGFLCEKTEKSFGGAMLQLFRDEQLRVKMGDQGHKRVQQKFSFQAF ADRLNGIIRDLVPISRESSAKKNK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1291-PA | 424 | CG1291-PA | 1..424 | 1..424 | 2232 | 100 | Plus |
CG11306-PB | 475 | CG11306-PB | 281..414 | 223..356 | 155 | 30.9 | Plus |
CG11306-PA | 475 | CG11306-PA | 281..414 | 223..356 | 155 | 30.9 | Plus |
Translation from 182 to 1456
> RE67594.pep MVRVLFLHPDLGIGGAERLVVDAALALKERGHQVSFLTNHHDSTHCFKET ADGTFPVHVVGDWLPRGLFGRFYAICAYLRMLYAAIYASFFMPQREQVDV VVCDLISVCIPVLRFAPHRPKVLFYCHFPDQLLSSREGLLKRLYRLPINW LEEHTIGLADKVLVNSKFTLRVFQDTFRRLSTVPDVLYPSLHTQYFDQMQ KKLEQRSALLDEPVHPRVPLNAFIYLDINRYERKKNHALALHSLRLLGDM LPATDFKRCRLIIAGGYDTRCMENVEHFAELEHLTEELKLQDHVVLLRSP TDEEKCRLLFAAHCLLYTPENEHFGIVPLEGMYCSKPVVALNSGGPTETV VSTSTGFLCEKTEKSFGGAMLQLFRDEQLRVKMGDQGHKRVQQKFSFQAF ADRLNGIIRDLVPISRESSAKKNK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24268-PA | 424 | GF24268-PA | 1..424 | 1..424 | 2028 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14904-PA | 424 | GG14904-PA | 1..424 | 1..424 | 2203 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15819-PA | 418 | GH15819-PA | 1..418 | 1..417 | 1920 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Alg2-PA | 424 | CG1291-PA | 1..424 | 1..424 | 2232 | 100 | Plus |
Alg11-PB | 475 | CG11306-PB | 281..414 | 223..356 | 155 | 30.9 | Plus |
Alg11-PA | 475 | CG11306-PA | 281..414 | 223..356 | 155 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12600-PA | 418 | GI12600-PA | 1..417 | 1..417 | 1852 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14148-PA | 403 | GL14148-PA | 204..336 | 224..356 | 151 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11900-PA | 420 | GA11900-PA | 1..417 | 1..417 | 1993 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14531-PA | 424 | GM14531-PA | 1..424 | 1..424 | 2244 | 98.6 | Plus |
Dsec\GM22390-PA | 473 | GM22390-PA | 231..412 | 159..356 | 152 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13727-PA | 424 | GD13727-PA | 1..424 | 1..424 | 2246 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12723-PA | 421 | GJ12723-PA | 1..419 | 1..422 | 1954 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17759-PA | 421 | GK17759-PA | 1..419 | 1..422 | 1887 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20359-PA | 424 | GE20359-PA | 1..424 | 1..424 | 2224 | 98.1 | Plus |
Dyak\GE19778-PA | 651 | GE19778-PA | 409..590 | 159..356 | 152 | 26.6 | Plus |
Dyak\GE23039-PA | 651 | GE23039-PA | 409..590 | 159..356 | 152 | 26.6 | Plus |