BDGP Sequence Production Resources |
Search the DGRC for RE67722
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 677 |
Well: | 22 |
Vector: | pFlc-1 |
Associated Gene/Transcript | elB-RC |
Protein status: | RE67722.pep: gold |
Sequenced Size: | 3336 |
Gene | Date | Evidence |
---|---|---|
CG4220 | 2002-08-23 | Blastp of sequenced clone |
CG4220 | 2003-01-01 | Sim4 clustering to Release 3 |
elB | 2008-04-29 | Release 5.5 accounting |
elB | 2008-08-15 | Release 5.9 accounting |
elB | 2008-12-18 | 5.12 accounting |
3336 bp (3336 high quality bases) assembled on 2005-08-22
GenBank Submission: BT001713
> RE67722.complete AGTCGAATTTCGTTATTTCACGTTTAAAGTTCGTACGTGCGCTGAACGGA CGGACTGCTACGACCGGAGTGTTGTGTTGTGAGTGCGAAAGCGTAAAATC GGCCAGGCGGATACATATGCACTTCCCCCAAACGCAAAAAAAAAAAAATT TTCAAAATATATACGAGAAAGTCAACACAATCGCCTATTTTTTAAGTCGT TTTCGAGTGATCCTTGTGCTTTATCAAAATTAGACTGAGTTTAAAACAAA GTATACATGTGAAACAAAATTAGCTCAGTAAATAGCAAACTTTTGGATAA CCCCACGTTCCCGGAACCATCTAATAACGTACGTGCCTCATCATAAAACG CGCCCTCAACGAGGCATTCGAGCGAAACCACTAACCAAAAACGGCCAAGC CAAAGAAATAAATAAAGTACATACATACCTATGTATATCTAACAAAAGGA AAACCCATAAATGAATACATTGTAAAAGCCCATGCGTGAATCAAACGTAA ATATTGTAGATGCAAGCCAGCAAAGAAAGTAGTGTGTAAATTCTTTTTTA CACACATATGTATCGTGTACACATATAAATAATAAATACCGCTGAGGCAA TTATAATACTTAATGAATTTATTGCACAATTAAAGCGAAGCCAGCATATC ACAACAACAAATTAATATGCCGCTGGCGTGAAAGTCACAACTCGACGCAT GAGAAATCCCCCCTGCGCCACAGCACTGAATTATTAATGAAATCGAATTA CAAACAAAGCCCAGCAAGCATCAGCAATAATGATTGCGAATCGAAATCGG AATAAATAATAAAAAGAGGAAAAATAAAAAATAAACACAATAATAAATTA TCATAAATAAGTACTCACATCAACGAGAACCGCGAAACGTGGACGGCTTA ATCAGCGAAAAGTCAGGCAGCTGGAAAATATTTCAAGCAAGGCGCAGGCG CCGCTTTTCACACGAGTTGGCAGCACACGCCACATAAATTGGCACTTACC GTTAAGCGCACTGCCGTACTTTGCGGTCGGGACAAAAGCAACAACCACTC AACACCTCCACCGAACCACCAAAGAAAAGCCGTCAAAGTGGATTTAACAA ATTATAATAAAATGCTGCAATCCAGCAATCATCATTATTTAAGACCGGAT TATATGACAGCTGCAGCTGCCCCAACAGCGCTGGACAACAAAAGCAGTCC GTTGGCGCTATTGGCCCAAACATGCAGCGCCATCGGGGCGGATACCACAA ACCCCAAGCTGCTGGCGGCGAACATCGAGAAGTCCACAAAGCAACTGCAG CACCACCCAAAGGGCTCGAGTGGATCGGGTGGATCCGGCTCCTTTGGCCT CAGCCAGCAGGCATCAATGGATGGCAGTGCACGCGATAAATCCTCACCGG TTAGCAGTCATTCATCCAGCGTTAGCACCGGTTCCGTGGAGCAGCAGCAA TTGCCCCCCGCCCATGGCAGCAGCAGCAGCAGCAAACCGACACCGACCAC ATTTAAGCCCTACGAGCCGAACAACAACATCAGCAATATAACCACAGCCG CCGATTGCGGCGCCACAAATCTCAGTAGCAACAACACCAGTGCCCAGCAG CGGGTTAAGACCCCCAAATCGATGACGAACGGCGGTGGCCAGCGTTGCGA CTCGAACCAAAGTGCCAGCTCGCAGCACCGGGAATCGCCGACAGCAGCCG GCTCACTGAGAAGGACCCCCACCTCGGGCCTGGCTGGTGGTGTGATGCAG CATAATGGCAGTCCCGGCCTGCCGCCAACCGCCTCCACCACGCCCGGTCG CAGCAACTCCAAAGAGTCGGCCGCCATGCACAGTCCCAGTGCAGCGGCAG CGGCAGCGGCGGCGGCTGCCCAAATCGCCAGCTCGAATCGCCTGCAGGAA GCCGCCCTCGCCGCCGCCAAGGAGGCCAACTATGTGAAGGCTCTGCACGC GGCCAGCCAGCAAGGATCCGCCTCAGCAGCAGCAGCTGCTGCATCCTATT ATCCACCCGGTTACGGCAGCCCCTATTCCATGGACTTGATGACCGCCAGC TCGTTGATGTCGCCACACCACGCCATGTTCAAGGCGTCGGCGATGAATCC GTATCTGAACTACGCCCGAATGAAGGGGCTGACGGAGCAGTCGATGATGG CGGCCACGCCGAATGTGTGCCGCGATCCCTATTGCACCGGATGTCCGGCC AGTCCGCACTACATAAACAAGGCGGCAGGTCAGCCGTGTCCGGCGGGATG TCCGCAGTGCGAGGGAGGTGGAGGCGGCGGAGGTGGTTCATCCAAATCCA GCGGAAGCCAAGGCGGATCGGGTGGTTCATCGAGTGCGGCAGCAGCGGCG GCGGCGGCAGCTGCCTCCTCGTACCACGCCCAGTTGGCCGCCCTGGCCGC TGCCTCCCAGATGCCGTACGTCTGCTCGTGGATCGGCAGCGATGCCGCGT ACTGTGGCAAGCGATTCGGCACCTCCGACGACCTGTTCCAGCATCTGCGC ACCCATACGGCCTCCGTTCCGGACGCAGTACTGAGTGCAGCGGCCGCCGG CGGTATACCGCCCAATCATCCGCTTTTCCAGCGCACCTATCCCACCCCGC CGCTGAGTCCGCTGTCGGCGGCCCGTTATCATCCGTACGGTAAGCCATCG ATGCTGCCGCCCTCGTTGGCGCCACCCGGAATGCCCGGACTGCCGCCACA TCCGGCGCTGGCCCAATATTTTGCACCGTACTCGTTATACGGTCCCAGGA TGGGATCTTCGCATCCGTAGTAGGCGGCTGATTGAATCGCAGCACAATGC GAAAGTTCGGCCTTCAGTCAAACCCATCATTTCTCTTGAGTCGTCGTCGT ATCTCTATGTGTTTTTTGGTGTATATGTATGACTCACTCGTGAAACGAAA AGCTAGTGATCTAATGTACTGTAGTTACATACAAATGTGTTTACAATTTA GCTTAAGGAGTCTAGCGTCTAGATATACATACATACATATATGTATCTAA TATCGATGATATATTACATTAGTGCAGCACATCAAATATCGCTCGTCCTT GTGTGTCTGTGTGTGTTTTGTGGTTGCTACTAAACGCAAACGGTAATTTT AATTTAATTTATTCTATTCAAGCGATTACGATTACGGAATTAACGAAATG AAAAGATTGTCCAAAAACTAAAAGTTGTAAAATTCTTGTAAAATATATGA GTAACTGCTTATAATTAATTCTATACATATGCCTAAACATAAATGTGTAA TTATGAACAATATTTTAATGTTCAATTAAGTCACTACAAAGAAATCAATA AATCAAAGAAAATTAAATACCAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 14389420..14390732 | 3321..2009 | 6565 | 100 | Minus |
chr2L | 23010047 | chr2L | 14407164..14408343 | 1180..1 | 5885 | 99.9 | Minus |
chr2L | 23010047 | chr2L | 14391020..14391851 | 2011..1180 | 4160 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 14390625..14391940 | 3324..2009 | 6580 | 100 | Minus |
2L | 23513712 | 2L | 14408368..14409547 | 1180..1 | 5885 | 99.9 | Minus |
2L | 23513712 | 2L | 14392228..14393059 | 2011..1180 | 4160 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 14390625..14391940 | 3324..2009 | 6580 | 100 | Minus |
2L | 23513712 | 2L | 14408368..14409547 | 1180..1 | 5885 | 99.9 | Minus |
2L | 23513712 | 2L | 14392228..14393059 | 2011..1180 | 4160 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2349..2512 | 1417..1589 | 132 | 57.5 | Plus |
R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 607..755 | 2361..2221 | 130 | 60 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 14389420..14390731 | 2010..3321 | 100 | <- | Minus |
chr2L | 14391022..14391850 | 1181..2009 | 100 | <- | Minus |
chr2L | 14407164..14408343 | 1..1180 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elB-RC | 1..1659 | 1112..2770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elB-RC | 1..1659 | 1112..2770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elB-RC | 1..1659 | 1112..2770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elB-RC | 1..1659 | 1112..2770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elB-RC | 1..1659 | 1112..2770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elB-RC | 1..3321 | 1..3321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elB-RC | 1..3321 | 1..3321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elB-RC | 3..3323 | 1..3321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elB-RC | 1..3321 | 1..3321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
elB-RC | 3..3323 | 1..3321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14390628..14391939 | 2010..3321 | 100 | <- | Minus |
2L | 14392230..14393058 | 1181..2009 | 100 | <- | Minus |
2L | 14408368..14409547 | 1..1180 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14390628..14391939 | 2010..3321 | 100 | <- | Minus |
2L | 14392230..14393058 | 1181..2009 | 100 | <- | Minus |
2L | 14408368..14409547 | 1..1180 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14390628..14391939 | 2010..3321 | 100 | <- | Minus |
2L | 14392230..14393058 | 1181..2009 | 100 | <- | Minus |
2L | 14408368..14409547 | 1..1180 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 14390628..14391939 | 2010..3321 | 100 | <- | Minus |
arm_2L | 14392230..14393058 | 1181..2009 | 100 | <- | Minus |
arm_2L | 14408368..14409547 | 1..1180 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14390628..14391939 | 2010..3321 | 100 | <- | Minus |
2L | 14392230..14393058 | 1181..2009 | 100 | <- | Minus |
2L | 14408368..14409547 | 1..1180 | 99 | Minus |
Translation from 1111 to 2769
> RE67722.pep MLQSSNHHYLRPDYMTAAAAPTALDNKSSPLALLAQTCSAIGADTTNPKL LAANIEKSTKQLQHHPKGSSGSGGSGSFGLSQQASMDGSARDKSSPVSSH SSSVSTGSVEQQQLPPAHGSSSSSKPTPTTFKPYEPNNNISNITTAADCG ATNLSSNNTSAQQRVKTPKSMTNGGGQRCDSNQSASSQHRESPTAAGSLR RTPTSGLAGGVMQHNGSPGLPPTASTTPGRSNSKESAAMHSPSAAAAAAA AAAQIASSNRLQEAALAAAKEANYVKALHAASQQGSASAAAAAASYYPPG YGSPYSMDLMTASSLMSPHHAMFKASAMNPYLNYARMKGLTEQSMMAATP NVCRDPYCTGCPASPHYINKAAGQPCPAGCPQCEGGGGGGGGSSKSSGSQ GGSGGSSSAAAAAAAAAASSYHAQLAALAAASQMPYVCSWIGSDAAYCGK RFGTSDDLFQHLRTHTASVPDAVLSAAAAGGIPPNHPLFQRTYPTPPLSP LSAARYHPYGKPSMLPPSLAPPGMPGLPPHPALAQYFAPYSLYGPRMGSS HP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15014-PA | 548 | GF15014-PA | 1..548 | 1..552 | 1861 | 83.2 | Plus |
Dana\GF14886-PA | 541 | GF14886-PA | 317..540 | 331..551 | 319 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24258-PA | 554 | GG24258-PA | 1..554 | 1..552 | 2088 | 94.6 | Plus |
Dere\GG25118-PA | 537 | GG25118-PA | 311..536 | 329..551 | 315 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13412-PA | 539 | GH13412-PA | 1..539 | 1..552 | 1653 | 73.2 | Plus |
Dgri\GH23905-PA | 544 | GH23905-PA | 320..543 | 329..551 | 319 | 40.3 | Plus |
Dgri\GH13513-PA | 544 | GH13513-PA | 320..543 | 329..551 | 319 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
elB-PC | 552 | CG4220-PC | 1..552 | 1..552 | 2882 | 100 | Plus |
elB-PD | 553 | CG4220-PD | 1..553 | 1..552 | 2870 | 99.8 | Plus |
noc-PB | 537 | CG4491-PB | 15..536 | 6..551 | 662 | 35.5 | Plus |
noc-PA | 537 | CG4491-PA | 15..536 | 6..551 | 662 | 35.5 | Plus |
Muc91C-PB | 949 | CG7709-PB | 556..934 | 66..519 | 174 | 24.8 | Plus |
Muc91C-PA | 950 | CG7709-PA | 557..935 | 66..519 | 174 | 24.8 | Plus |
Samuel-PE | 846 | CG31868-PE | 116..497 | 55..431 | 165 | 23.9 | Plus |
Samuel-PD | 846 | CG31868-PD | 116..497 | 55..431 | 165 | 23.9 | Plus |
Samuel-PB | 968 | CG31868-PB | 116..497 | 55..431 | 165 | 23.9 | Plus |
Samuel-PA | 968 | CG31868-PA | 116..497 | 55..431 | 165 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17650-PA | 527 | GI17650-PA | 1..527 | 1..552 | 1480 | 72.3 | Plus |
Dmoj\GI10311-PA | 524 | GI10311-PA | 300..523 | 329..551 | 334 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25769-PA | 569 | GL25769-PA | 1..569 | 1..552 | 1695 | 78.4 | Plus |
Dper\GL25989-PA | 537 | GL25989-PA | 312..536 | 329..551 | 324 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18043-PA | 573 | GA18043-PA | 1..573 | 1..552 | 1692 | 77.9 | Plus |
Dpse\GA18219-PA | 537 | GA18219-PA | 312..536 | 329..551 | 324 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14828-PA | 493 | GM14828-PA | 1..383 | 1..384 | 1495 | 96.9 | Plus |
Dsec\GM15623-PA | 537 | GM15623-PA | 313..536 | 331..551 | 321 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11969-PA | 119 | GD11969-PA | 1..119 | 434..552 | 636 | 100 | Plus |
Dsim\GD23964-PA | 537 | GD23964-PA | 313..536 | 331..551 | 320 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18215-PA | 521 | GJ18215-PA | 1..521 | 1..552 | 1671 | 74.2 | Plus |
Translation from 1111 to 2769
> RE67722.hyp MLQSSNHHYLRPDYMTAAAAPTALDNKSSPLALLAQTCSAIGADTTNPKL LAANIEKSTKQLQHHPKGSSGSGGSGSFGLSQQASMDGSARDKSSPVSSH SSSVSTGSVEQQQLPPAHGSSSSSKPTPTTFKPYEPNNNISNITTAADCG ATNLSSNNTSAQQRVKTPKSMTNGGGQRCDSNQSASSQHRESPTAAGSLR RTPTSGLAGGVMQHNGSPGLPPTASTTPGRSNSKESAAMHSPSAAAAAAA AAAQIASSNRLQEAALAAAKEANYVKALHAASQQGSASAAAAAASYYPPG YGSPYSMDLMTASSLMSPHHAMFKASAMNPYLNYARMKGLTEQSMMAATP NVCRDPYCTGCPASPHYINKAAGQPCPAGCPQCEGGGGGGGGSSKSSGSQ GGSGGSSSAAAAAAAAAASSYHAQLAALAAASQMPYVCSWIGSDAAYCGK RFGTSDDLFQHLRTHTASVPDAVLSAAAAGGIPPNHPLFQRTYPTPPLSP LSAARYHPYGKPSMLPPSLAPPGMPGLPPHPALAQYFAPYSLYGPRMGSS HP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
elB-PC | 552 | CG4220-PC | 1..552 | 1..552 | 2882 | 100 | Plus |
elB-PD | 553 | CG4220-PD | 1..553 | 1..552 | 2870 | 99.8 | Plus |
noc-PB | 537 | CG4491-PB | 15..536 | 6..551 | 662 | 35.5 | Plus |
noc-PA | 537 | CG4491-PA | 15..536 | 6..551 | 662 | 35.5 | Plus |
Muc91C-PB | 949 | CG7709-PB | 556..934 | 66..519 | 174 | 24.8 | Plus |