BDGP Sequence Production Resources |
Search the DGRC for RE67859
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 678 |
Well: | 59 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14450-RA |
Protein status: | RE67859.pep: gold |
Preliminary Size: | 1146 |
Sequenced Size: | 1497 |
Gene | Date | Evidence |
---|---|---|
CG14450 | 2001-12-14 | Blastp of sequenced clone |
CG14450 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14450 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14450 | 2008-04-29 | Release 5.5 accounting |
CG14450 | 2008-08-15 | Release 5.9 accounting |
CG14450 | 2008-12-18 | 5.12 accounting |
1497 bp (1497 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071634
> RE67859.complete ATTGACGATATCAAATTAAGTAACAACAAATATAAATCATATACTGGAAA ATATGTTGTGCCGGCGATCATTGTTGGGCGTAACGACAAAATGCCTAAGA CTTTCGTCCACGCAGCAACACAGATCGGGTCAGCCGGAATGTGACCAAGC CATCGGCCTCTTGCCCGCCTACTCGGATGCAGATCGTTTGAAGATCTTGA AGACGATTAATGAAAGCAGCATGAATCAGATAGCCAACTACGACATAACC AAGGCAAGGGCAACCAAGCTGCAAAACTGGAAGAACCGTCACGGACCGCT GCAGGAACTCAGCGACATCCTGTATGTGGAGGGATTCGGACTGAAGGTGA CCACCAAGTTCTTTAAGAGTCTGCTTGCGCCGCCGAGCAGTGGGAGCGCA CAAGTAGGGGAAAATAGACCAAAGACTGCACGAGTCGCGCCCTTTATAAC ACCGGCCATGGACGAGGGACAGCGTTCACGTATTGTATCTGCTGTAGGGG TGCGCATCGGAGTGACCAGTGTAAGCTGGGCGCGATTAAAGATCGGAAGC AACGAAGCTCCCTGTCTGCTCACGCACTGGCAGCACCATGAGCTGAACGA CAAGAAGCTGCATTTGTCAGAACTTTCCCGCCGATGCCTCTATGTATCTC ACCAGATACCCGTGGCCGATTGCTACGTCATGGAGAGTCCACAAATGGCC CAGGCCAGCAGCAACCCAGGGAGCATCGATCAACAGAACGTGAACATCCA GAAGGCCCAGGTTTCCGCAATCATGAGCTTCTCCTTGATGGCCCGATCAG ATGGCGACGAGAACAAGACGAACAACGTCTACTACATGCGACGTTTTCTC TCAGCCCGACTATTTAATCACATGGTGGGTACTGAGCGCGTGTCGTCCGA GGATACGATATTGGCCATGATGCGAACCCATTACAACGTGGAACATCAGA TCCCCGAAACAGAGCCCCCGTTGAAGCTGCACAAACAGATCGACTTTCCC GCTGACCTACGCCTCGAATTCTCACAACAAGAGCGCTACCAGCGCGAGCT TCTAGGCCAGGCACTTCTCCTCAGCTTAGCCTTTACTCGTCTCGTGCTTC AGCAAGATCCGCAAAGCATTGCATCTGTATCTCGCAACTCTAAAAACTCC TCTCCAAGTCGAGCCACTTAAAAAGCTACAAGTGTAAGAATATGAACTCG ACTCTTTTTGGCCTTTGCACTTTGTATTATAATGACCCGTTGAACAATTT TATGCACAATATTTAACAGGGGTTTTAATAGGAGCAGTTTCTAATGGCAC AACTGCATTTCCATGGAATACCATAAACATAGATTATTTTGAGCTTGGCC CCACTTAGCTAATTAGAATTTGTCGCCATCAAAAATATCATGTCTTTCTT TCATTACTGCCCACATATTAGGTCTTAAAAATATTTATTTAGCAGAACTA AAATAAATAAATACTTGATGCTGGCCCTGTCAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 22715137..22716380 | 238..1481 | 100 | <- | Minus |
chr3L | 22716435..22716671 | 1..237 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14450-RA | 1..1119 | 53..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14450-RA | 1..1119 | 53..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14450-RA | 1..1119 | 53..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14450-RA | 1..1119 | 53..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14450-RA | 1..1119 | 53..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14450-RA | 12..1492 | 1..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14450-RA | 7..1487 | 1..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14450-RA | 22..1502 | 1..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14450-RA | 12..1492 | 1..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14450-RA | 22..1502 | 1..1481 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22726234..22727477 | 238..1481 | 100 | <- | Minus |
3L | 22727532..22727768 | 1..237 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22726234..22727477 | 238..1481 | 100 | <- | Minus |
3L | 22727532..22727768 | 1..237 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22726234..22727477 | 238..1481 | 100 | <- | Minus |
3L | 22727532..22727768 | 1..237 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 22720632..22720868 | 1..237 | 99 | Minus | |
arm_3L | 22719334..22720577 | 238..1481 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22719334..22720577 | 238..1481 | 100 | <- | Minus |
3L | 22720632..22720868 | 1..237 | 99 | Minus |
Translation from 52 to 1170
> RE67859.pep MLCRRSLLGVTTKCLRLSSTQQHRSGQPECDQAIGLLPAYSDADRLKILK TINESSMNQIANYDITKARATKLQNWKNRHGPLQELSDILYVEGFGLKVT TKFFKSLLAPPSSGSAQVGENRPKTARVAPFITPAMDEGQRSRIVSAVGV RIGVTSVSWARLKIGSNEAPCLLTHWQHHELNDKKLHLSELSRRCLYVSH QIPVADCYVMESPQMAQASSNPGSIDQQNVNIQKAQVSAIMSFSLMARSD GDENKTNNVYYMRRFLSARLFNHMVGTERVSSEDTILAMMRTHYNVEHQI PETEPPLKLHKQIDFPADLRLEFSQQERYQRELLGQALLLSLAFTRLVLQ QDPQSIASVSRNSKNSSPSRAT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23449-PA | 346 | GF23449-PA | 6..340 | 36..372 | 1081 | 61.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13172-PA | 373 | GG13172-PA | 1..373 | 1..372 | 1636 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16761-PA | 375 | GH16761-PA | 8..366 | 4..364 | 1155 | 62 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14450-PA | 372 | CG14450-PA | 1..372 | 1..372 | 1902 | 100 | Plus |
CG14450-PB | 62 | CG14450-PB | 1..61 | 1..61 | 309 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13422-PA | 322 | GI13422-PA | 11..313 | 59..364 | 1093 | 67.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18119-PA | 383 | GL18119-PA | 31..375 | 31..371 | 1284 | 69.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12996-PA | 383 | GA12996-PA | 31..375 | 31..371 | 1276 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22082-PA | 372 | GM22082-PA | 1..372 | 1..372 | 1835 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12057-PA | 372 | GD12057-PA | 1..372 | 1..372 | 1829 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11782-PA | 374 | GJ11782-PA | 7..365 | 4..364 | 1155 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20570-PA | 448 | GK20570-PA | 9..359 | 2..367 | 1010 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19493-PA | 373 | GE19493-PA | 1..373 | 1..372 | 1624 | 84.8 | Plus |
Translation from 52 to 1170
> RE67859.hyp MLCRRSLLGVTTKCLRLSSTQQHRSGQPECDQAIGLLPAYSDADRLKILK TINESSMNQIANYDITKARATKLQNWKNRHGPLQELSDILYVEGFGLKVT TKFFKSLLAPPSSGSAQVGENRPKTARVAPFITPAMDEGQRSRIVSAVGV RIGVTSVSWARLKIGSNEAPCLLTHWQHHELNDKKLHLSELSRRCLYVSH QIPVADCYVMESPQMAQASSNPGSIDQQNVNIQKAQVSAIMSFSLMARSD GDENKTNNVYYMRRFLSARLFNHMVGTERVSSEDTILAMMRTHYNVEHQI PETEPPLKLHKQIDFPADLRLEFSQQERYQRELLGQALLLSLAFTRLVLQ QDPQSIASVSRNSKNSSPSRAT*