![]() | BDGP Sequence Production Resources |
Search the DGRC for RE67916
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 679 |
Well: | 16 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Obp83cd-RA |
Protein status: | RE67916.pep: gold |
Preliminary Size: | 690 |
Sequenced Size: | 916 |
Gene | Date | Evidence |
---|---|---|
CG15582 | 2001-12-14 | Blastp of sequenced clone |
CG15582 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15582 | 2003-01-01 | Sim4 clustering to Release 3 |
Obp83cd | 2008-04-29 | Release 5.5 accounting |
Obp83cd | 2008-08-15 | Release 5.9 accounting |
Obp83cd | 2008-12-18 | 5.12 accounting |
916 bp (916 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071635
> RE67916.complete AATCAAGCAAAGAACGTGCAGGAAACTACTAGAATATTGAGAATTGTTTA GCAATGCAGATGAAAAGTGGAATATTAATAGCATTATGTCTATGCCTTTC GTTGAACGAAGGCCTGGCCCTTCTGGAGCACGAAGGCGAGACCATCAACA GATGCATCCAAAACTATGGCGGACTTACTGCGGAAAATGCCGAACGTCTA GAACGATTCAAGGAATGGTCGGATAGCTACGAGGAAATCCCCTGCTTCAC GCGCTGCTATTTGTCCGAGATGTTCGACTTTTACAATAACTTAACGGGCT TCAATAAGGACGGAATTGTGGGCGTCTTTGGAAGACCCGTCTACGAAGCC TGCCGAAAGAAATTGGAACTGCCATTCGAATCAGGCGAGAGCAGCTGCAA ACATGCCTACGAGGGCTTCCACTGCATCACCAACATGGAAAGCCACCCGT TCACGGTTATTGACAACATGCCAAACATATCCCCGTCGGCCAAGGATGCA ATGAAGGACTGCCTTCAGGATGTCCACCAGGACGAGTGGAAGAGCTTCGA TGCCTTCGCCTACTATCCTGTCAATGAACCGATTCCGTGCTTCACCCGGT GCTTCGTGGACAAGCTGCATATCTTCGAGGAGAAAACGCGTCTTTGGAAA CTGGAGGCGATGAAGCAAAACCTGGGCATTCCGGCCAAAGGAGCTCGCAT AAGGACCTGCCATCGGCACCGCGGCAGGGACCGATGTGCCACATATTACA AACAGTTCACCTGCTACGCGATGGCTGTTTAGGCAGCTATTATTGTAAGC AAAATTTATAAATGATTACATACTAATTTAATGATAAAAGTATGCTTTCA TTTGTCTAGATAATATTTCCGAATTTTGAAATATATAGATCTTACAATGC GAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1934909..1935373 | 435..899 | 2310 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 1933940..1934270 | 104..434 | 1655 | 100 | Plus |
chr3R | 27901430 | chr3R | 1933774..1933877 | 1..104 | 520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1933941..1934270 | 105..434 | 100 | -> | Plus |
chr3R | 1934909..1935375 | 435..901 | 99 | Plus | |
chr3R | 1933774..1933877 | 1..104 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp83cd-RA | 1..729 | 54..782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp83cd-RA | 1..729 | 54..782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp83cd-RA | 1..729 | 54..782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp83cd-RA | 1..729 | 54..782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp83cd-RA | 1..729 | 54..782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp83cd-RA | 1..901 | 1..901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp83cd-RA | 1..901 | 1..901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp83cd-RA | 1..899 | 1..899 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp83cd-RA | 1..901 | 1..901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp83cd-RA | 1..899 | 1..899 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6108134..6108237 | 1..104 | 100 | -> | Plus |
3R | 6108301..6108630 | 105..434 | 100 | -> | Plus |
3R | 6109269..6109735 | 435..901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6108134..6108237 | 1..104 | 100 | -> | Plus |
3R | 6108301..6108630 | 105..434 | 100 | -> | Plus |
3R | 6109269..6109735 | 435..901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6108134..6108237 | 1..104 | 100 | -> | Plus |
3R | 6108301..6108630 | 105..434 | 100 | -> | Plus |
3R | 6109269..6109735 | 435..901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1933856..1933959 | 1..104 | 100 | -> | Plus |
arm_3R | 1934023..1934352 | 105..434 | 100 | -> | Plus |
arm_3R | 1934991..1935457 | 435..901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5849132..5849461 | 105..434 | 100 | -> | Plus |
3R | 5850100..5850566 | 435..901 | 99 | Plus | |
3R | 5848965..5849068 | 1..104 | 100 | -> | Plus |
Translation from 53 to 781
> RE67916.pep MQMKSGILIALCLCLSLNEGLALLEHEGETINRCIQNYGGLTAENAERLE RFKEWSDSYEEIPCFTRCYLSEMFDFYNNLTGFNKDGIVGVFGRPVYEAC RKKLELPFESGESSCKHAYEGFHCITNMESHPFTVIDNMPNISPSAKDAM KDCLQDVHQDEWKSFDAFAYYPVNEPIPCFTRCFVDKLHIFEEKTRLWKL EAMKQNLGIPAKGARIRTCHRHRGRDRCATYYKQFTCYAMAV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16368-PA | 246 | GF16368-PA | 17..239 | 19..241 | 827 | 64.1 | Plus |
Dana\GF18628-PA | 247 | GF18628-PA | 19..231 | 21..238 | 178 | 23.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13108-PA | 242 | GG13108-PA | 1..241 | 1..241 | 1114 | 84.6 | Plus |
Dere\GG10589-PA | 247 | GG10589-PA | 1..229 | 3..238 | 205 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14012-PA | 244 | GH14012-PA | 5..243 | 8..242 | 651 | 47.5 | Plus |
Dgri\GH14286-PA | 226 | GH14286-PA | 3..213 | 22..238 | 155 | 22.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Obp83cd-PA | 242 | CG15582-PA | 1..242 | 1..242 | 1334 | 100 | Plus |
Obp83ef-PA | 245 | CG31557-PA | 1..230 | 3..238 | 200 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24045-PA | 242 | GL24045-PA | 8..242 | 8..242 | 861 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\Obp83cd-PA | 242 | GA13828-PA | 8..242 | 8..242 | 874 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10854-PA | 242 | GM10854-PA | 1..242 | 1..242 | 1232 | 92.6 | Plus |
Dsec\GM10568-PA | 243 | GM10568-PA | 1..230 | 3..238 | 196 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Obp83cd-PA | 242 | GD19836-PA | 1..242 | 1..242 | 1251 | 94.6 | Plus |
Dsim\Obp83ef-PA | 243 | GD19560-PA | 1..230 | 3..238 | 204 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Obp83cd-PA | 239 | GJ14238-PA | 4..239 | 7..242 | 761 | 55.5 | Plus |
Dvir\Obp83ef-PA | 223 | GJ14494-PA | 2..210 | 21..238 | 160 | 22.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13025-PA | 207 | GK13025-PA | 1..206 | 35..241 | 594 | 49.3 | Plus |
Translation from 53 to 781
> RE67916.hyp MQMKSGILIALCLCLSLNEGLALLEHEGETINRCIQNYGGLTAENAERLE RFKEWSDSYEEIPCFTRCYLSEMFDFYNNLTGFNKDGIVGVFGRPVYEAC RKKLELPFESGESSCKHAYEGFHCITNMESHPFTVIDNMPNISPSAKDAM KDCLQDVHQDEWKSFDAFAYYPVNEPIPCFTRCFVDKLHIFEEKTRLWKL EAMKQNLGIPAKGARIRTCHRHRGRDRCATYYKQFTCYAMAV*