BDGP Sequence Production Resources |
Search the DGRC for RE67941
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 679 |
Well: | 41 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG18048-RA |
Protein status: | RE67941.pep: gold |
Preliminary Size: | 1305 |
Sequenced Size: | 1421 |
Gene | Date | Evidence |
---|---|---|
CG18048 | 2002-01-01 | Sim4 clustering to Release 2 |
CG18048 | 2002-03-20 | Blastp of sequenced clone |
CG18048 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18048 | 2008-04-29 | Release 5.5 accounting |
CG18048 | 2008-08-15 | Release 5.9 accounting |
CG18048 | 2008-12-18 | 5.12 accounting |
1421 bp (1421 high quality bases) assembled on 2002-03-20
GenBank Submission: AY094893
> RE67941.complete AGTGTGCCAGCCTTGGTCACACTGCCTGGCACGAGTTCCGAATTGGGAGG AATTTATTTTGAAAATAAAAGTAACGAATGGAACCTGTGAAAGAGACGAT GACCACTGTCAAGGCGGAGAAGCCGGTAACCACCACTTGCTCCTACTGGG TGTTACGCAAAAAGCGCCGCTGCAAGATGACTGCAAACAAGGGCAGTGAG TTTTGTGGAGCCCATGCCTCATCGGCAGCCACCACTGCAACTTGCGATGA AAAAGCTAGAGAAGATTCCTTCCAGGAACGTATTCCCTGCCCGCTTGATC ACAAACATACCGTGTTTAAAAGAAAACTAGCCAAACACTTGACCATTTGC AATGCCAGGGATCAGGAAAGTTCACTGCCCTACATTGTAAAAGGAGTGAA TTCTGGAGACAATCTTAAGGAAACAGACGAAGATTTGAACAAATTCAATC AAATAAAACTGCACGAACTGGCGGATGAAGAGTTCTACAGTCTGATCGAC AAAGTTAAGAATCTGTATGACAAGCACATCAATTCCAGCATACAGGAACT GCAGCTGGAGCACGAATCCCTAAAGGAGGAACTTAGTCGCAAGGACTACG GCCAGGAAACGCTACGCCAGCTCACCCAGACCACTAGCTTGCTGGGCATC CTGGAACACGATCACCAGTTGATGGATCACACGAGCTATATAGAATTCGG AGCCGGAAAGGGACAATTGGCCTACTTTTTGGCCACCGTATTGCAGGAAC AGAAGTTGAGTCACTCACAGGTGGTCCTCATCGATCGAATGTCCCTGCGG CACAAGAAGGACAACAAGTTGGCCAACAGGGAGGTGGTGCAACGTATCCG TGCTGATATCGCTGATCTTAAGCTTTCTGCTCTGCCGGAGCTAAAGAAAA CCCAACGAACGGTGGCTTTTTCGAAGCACCTCTGTGGAGCAGCTACAGAC TTGACCCTGAGATGTATACTCGGTGATGGAAATGCCAGCTCGGACTACGT TCTCATCGCCCTGTGTTGTCATCATCGCTGCTCCTGGCGCTCCTACGTGG GACGCAAGTTTCTTCAGGAAGCTGGAATTGGACCACGGGAGTTCGTTATC CTAACCAAAATGGTCAGTTGGGCAGTTTGTGGCACGGGCTTAAGCCGAGA GCGGCGTAAGGCCATGGAATCGGCTGACTTTCAGCTCACCGAGACGAACA CGCAGCGTCTAACTCGCCAGGAGCGCGAACAAATTGGCCAACAGTGCAAG CGGGTTCTGGATTATGGACGACTGGAGCATCTACGATCCCACGGATATCA AGCAGAACTTAAGTTCTATGTTCCCAGGGATGTGACTTTGGAAAACGTGG TTCTGCTGGCCAGACCGACCAGCCCTAAGCTGGACCAAAATAAATGCTGT TGACCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18048-RA | 1404 | CG18048-RA | 1..1404 | 1..1404 | 7020 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 2171793..2173196 | 1..1404 | 7020 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 6346116..6347519 | 1..1404 | 7020 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 6086947..6088350 | 1..1404 | 7020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 2171793..2173196 | 1..1405 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18048-RA | 1..1326 | 78..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18048-RA | 1..1326 | 78..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18048-RA | 1..1326 | 78..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18048-RA | 1..1326 | 78..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18048-RA | 1..1326 | 78..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18048-RA | 1..1403 | 1..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18048-RA | 1..1404 | 1..1405 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18048-RA | 6..1409 | 1..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18048-RA | 1..1403 | 1..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18048-RA | 6..1409 | 1..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6346116..6347519 | 1..1405 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6346116..6347519 | 1..1405 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6346116..6347519 | 1..1405 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 2171838..2173241 | 1..1405 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6086947..6088350 | 1..1405 | 99 | Plus |
Translation from 77 to 1402
> RE67941.pep MEPVKETMTTVKAEKPVTTTCSYWVLRKKRRCKMTANKGSEFCGAHASSA ATTATCDEKAREDSFQERIPCPLDHKHTVFKRKLAKHLTICNARDQESSL PYIVKGVNSGDNLKETDEDLNKFNQIKLHELADEEFYSLIDKVKNLYDKH INSSIQELQLEHESLKEELSRKDYGQETLRQLTQTTSLLGILEHDHQLMD HTSYIEFGAGKGQLAYFLATVLQEQKLSHSQVVLIDRMSLRHKKDNKLAN REVVQRIRADIADLKLSALPELKKTQRTVAFSKHLCGAATDLTLRCILGD GNASSDYVLIALCCHHRCSWRSYVGRKFLQEAGIGPREFVILTKMVSWAV CGTGLSRERRKAMESADFQLTETNTQRLTRQEREQIGQQCKRVLDYGRLE HLRSHGYQAELKFYVPRDVTLENVVLLARPTSPKLDQNKCC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16397-PA | 441 | GF16397-PA | 1..432 | 1..434 | 1540 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13358-PA | 435 | GG13358-PA | 3..434 | 9..440 | 2071 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14041-PA | 435 | GH14041-PA | 10..434 | 16..439 | 1410 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18048-PA | 441 | CG18048-PA | 1..441 | 1..441 | 2298 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24415-PA | 428 | GI24415-PA | 6..427 | 12..435 | 1480 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24080-PA | 425 | GL24080-PA | 3..422 | 4..430 | 1545 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14776-PA | 425 | GA14776-PA | 3..422 | 4..430 | 1545 | 67.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10888-PA | 440 | GM10888-PA | 1..440 | 1..439 | 2118 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19867-PA | 430 | GD19867-PA | 1..430 | 1..439 | 2048 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14273-PA | 425 | GJ14273-PA | 1..415 | 8..429 | 1486 | 65.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13057-PA | 431 | GK13057-PA | 1..423 | 8..434 | 1494 | 65 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10212-PA | 436 | GE10212-PA | 3..435 | 9..440 | 1986 | 87.3 | Plus |
Translation from 77 to 1402
> RE67941.hyp MEPVKETMTTVKAEKPVTTTCSYWVLRKKRRCKMTANKGSEFCGAHASSA ATTATCDEKAREDSFQERIPCPLDHKHTVFKRKLAKHLTICNARDQESSL PYIVKGVNSGDNLKETDEDLNKFNQIKLHELADEEFYSLIDKVKNLYDKH INSSIQELQLEHESLKEELSRKDYGQETLRQLTQTTSLLGILEHDHQLMD HTSYIEFGAGKGQLAYFLATVLQEQKLSHSQVVLIDRMSLRHKKDNKLAN REVVQRIRADIADLKLSALPELKKTQRTVAFSKHLCGAATDLTLRCILGD GNASSDYVLIALCCHHRCSWRSYVGRKFLQEAGIGPREFVILTKMVSWAV CGTGLSRERRKAMESADFQLTETNTQRLTRQEREQIGQQCKRVLDYGRLE HLRSHGYQAELKFYVPRDVTLENVVLLARPTSPKLDQNKCC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18048-PA | 441 | CG18048-PA | 1..441 | 1..441 | 2298 | 100 | Plus |