BDGP Sequence Production Resources |
Search the DGRC for RE68347
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 683 |
Well: | 47 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14253-RB |
Protein status: | RE68347.pep: gold |
Preliminary Size: | 1092 |
Sequenced Size: | 1898 |
Gene | Date | Evidence |
---|---|---|
CG14253 | 2001-12-14 | Blastp of sequenced clone |
CG14253 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14253 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14253 | 2008-04-29 | Release 5.5 accounting |
CG14253 | 2008-08-15 | Release 5.9 accounting |
CG14253 | 2008-12-18 | 5.12 accounting |
1898 bp (1898 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071638
> RE68347.complete AGTTCTCGTCGAGCGGTCGTGTCGTCTGAACGTCTCCAGTTGTGGCTTTT CTTTTCCATCGGGTCAGACACACCAAGCTAGTGCCAAGTCCTACCGAACT GAGCGAATCGAGTCCAATAATGCGCACTCAAGTGCTAAGTTTTTGTTTAG CAATTTTGCTAATTGTTTGTCTGTTGTAAACGACGAAAAAGACGTATGTA ATTAGATGCGGCTGCCAAGTGCCGCGGATCAGAGATGGGTAGCCGGCCGC AGAGGATACGCCGGATTGGTGATAGTCTGCAGATGCTAACCCGGGAAGCC AGAAGCGAAGTGGTACGCTACGAACATATAGTAATATGTCTCATGGTCAT GATAGCAGTATTCTCCATACTATGGAACATAACGCTGATCATGATATCGG GTGATCTGTACGAGGGAATAGTCAGTGCCAAACTTATCTTCCGGGAGCGC AGCGTTGATAAAATGGATGAGTCCAGCAAGGAGATCCTTCATCGGGATTT CATCAAAGCCACCCAGTATGCCTATGGAAGGCAGTACTCCGTGCAGGATG TCACACCTGAATCGCTGAAGAGCGAGAGCCAAATCTTTAAGTTACCGCAT ATCTACGAATCTATCGAGAATCGACCGAAATTGGAGCGTCTCATTGCTGA AAATAAAGTGGAGGTTATTTCTACCACGACGACTCCTCCACCGAAGATCA CTTTCAATGCTGAGGCGGATCGCCACTTTTTGAGCACAATGTCCATCGAT GTTATGGCCACTGTCTGGGAAAGAGGACCAGGAGCTCAGTTTGTCTACGT ATTTCCCCTCATATCAGAGATCGTGGCCATTATCTGGACAGCCATGTGTT TGATTTACCAGACAGGCAGCAAAAAGAGCTCAGTTTTGCCGAAGCCGTGG CGCATTGTGGTGCCCTCCATCGTTATCTTCTCGGTGATGAGTTTGTGCAG TGTAATCTACACAATCCTGACCAATGGCCACCTTAAGCACCTCTGTGGCC AACTGAGGGAGAATCTCACAGATCCCACTGCCATCACCTGCGGCGATGCC ATCGCCCTGTTGCGTCCCATCATTCACGACCACAACGTATCCCATGATAC TTATCTGGAGCTCTTCCGCTTCAGCTACTTGATCGGAATGGTACTGTGGA TAGTGGCTCTGCTGGTCATGGTGCTGCGTTATGTATTCGCCGTGGACTTC CAGCTGGTGGACATTGATGATATGTTCGATAGCGGACGAAATGGCTCTGC ACAAGTTCAGATTCAACCGGTATACACTGAGGTAGTGCAGCAGAGCAGTC CACAGCACCAGACGCAGATGCGTCCGAGATCGGAAGATGACTATCAGAGT GCCAGGTCGCACTTGAGCGATCTTGCAGTTCCACTTCTGGAGGTGCAAAG CCAGTCCCAGATTCCGCCAACTAGCTTGGCCTAATCCTGCGGGTAGCCAA CAGATCAGCAATCTCAGGTTTATTTTTATACGTTGTGTTAGTGTTTAGTA TATCTAACGACTAAGGAATATTTTATCAACTAACACAATTTAGGTTAAGT TTTAGGGGACCCTCTAGTCGAGAGTCTTCGATCAATCGATATTTCATTGA TAGTTTTCACTATCCTAGCTTAGTGAACTCGTGCCTCGATATCAAATATC TAAAATGTGGTTTAATCAAGGCTATAGAAAATACTACAATACCATTATTG TTGCATACTCTTGGGCTTATAAGTTCAATCTGAGCTTGAAATATGCCTGG TTAGGCCACATTGTCCAGTCGATTCCTTTGACTATAACCTCTGGTAACTT AAATCCATGAGTTTTATTTAAAATGCAACATAAAACCGAAAACAAGTGCG AATAAAATACAAATATTGTGTATACGAGACAGGAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14253-RB | 2086 | CG14253-RB | 110..1995 | 1..1886 | 9430 | 100 | Plus |
CG14253.a | 2119 | CG14253.a | 467..2028 | 325..1886 | 7810 | 100 | Plus |
CG14253.c | 1630 | CG14253.c | 70..1630 | 326..1886 | 7805 | 100 | Plus |
CG14253.c | 1630 | CG14253.c | 1..69 | 244..312 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 22807769..22808770 | 882..1883 | 4785 | 98.5 | Plus |
chr3R | 27901430 | chr3R | 22801620..22801944 | 1..325 | 1550 | 98.5 | Plus |
chr3R | 27901430 | chr3R | 22807027..22807281 | 326..580 | 1260 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 22807340..22807498 | 581..739 | 795 | 100 | Plus |
chr3R | 27901430 | chr3R | 22807554..22807700 | 735..881 | 720 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 26984705..26985709 | 882..1886 | 5025 | 100 | Plus |
3R | 32079331 | 3R | 26978544..26978868 | 1..325 | 1625 | 100 | Plus |
3R | 32079331 | 3R | 26983963..26984217 | 326..580 | 1275 | 100 | Plus |
3R | 32079331 | 3R | 26984276..26984434 | 581..739 | 795 | 100 | Plus |
3R | 32079331 | 3R | 26984490..26984636 | 735..881 | 720 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 26725536..26726540 | 882..1886 | 5025 | 100 | Plus |
3R | 31820162 | 3R | 26719375..26719699 | 1..325 | 1625 | 100 | Plus |
3R | 31820162 | 3R | 26724794..26725048 | 326..580 | 1275 | 100 | Plus |
3R | 31820162 | 3R | 26725107..26725265 | 581..739 | 795 | 100 | Plus |
3R | 31820162 | 3R | 26725321..26725467 | 735..881 | 720 | 99.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 22801620..22801944 | 1..325 | 98 | -> | Plus |
chr3R | 22807027..22807281 | 326..580 | 99 | -> | Plus |
chr3R | 22807340..22807498 | 581..739 | 100 | -> | Plus |
chr3R | 22807559..22807700 | 740..881 | 100 | -> | Plus |
chr3R | 22807769..22808770 | 882..1883 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14253-RB | 1..1200 | 235..1434 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14253-RB | 1..1200 | 235..1434 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14253-RB | 1..1200 | 235..1434 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14253-RB | 1..1200 | 235..1434 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14253-RB | 1..1200 | 235..1434 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14253-RB | 1..1883 | 1..1883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14253-RB | 1..1883 | 1..1883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14253-RB | 4..1886 | 1..1883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14253-RB | 1..1883 | 1..1883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14253-RB | 4..1886 | 1..1883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26978544..26978868 | 1..325 | 100 | -> | Plus |
3R | 26983963..26984217 | 326..580 | 100 | -> | Plus |
3R | 26984276..26984434 | 581..739 | 100 | -> | Plus |
3R | 26984495..26984636 | 740..881 | 100 | -> | Plus |
3R | 26984705..26985706 | 882..1883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26978544..26978868 | 1..325 | 100 | -> | Plus |
3R | 26983963..26984217 | 326..580 | 100 | -> | Plus |
3R | 26984276..26984434 | 581..739 | 100 | -> | Plus |
3R | 26984495..26984636 | 740..881 | 100 | -> | Plus |
3R | 26984705..26985706 | 882..1883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26978544..26978868 | 1..325 | 100 | -> | Plus |
3R | 26983963..26984217 | 326..580 | 100 | -> | Plus |
3R | 26984276..26984434 | 581..739 | 100 | -> | Plus |
3R | 26984495..26984636 | 740..881 | 100 | -> | Plus |
3R | 26984705..26985706 | 882..1883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 22804266..22804590 | 1..325 | 100 | -> | Plus |
arm_3R | 22809685..22809939 | 326..580 | 100 | -> | Plus |
arm_3R | 22809998..22810156 | 581..739 | 100 | -> | Plus |
arm_3R | 22810217..22810358 | 740..881 | 100 | -> | Plus |
arm_3R | 22810427..22811428 | 882..1883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26719375..26719699 | 1..325 | 100 | -> | Plus |
3R | 26724794..26725048 | 326..580 | 100 | -> | Plus |
3R | 26725107..26725265 | 581..739 | 100 | -> | Plus |
3R | 26725326..26725467 | 740..881 | 100 | -> | Plus |
3R | 26725536..26726537 | 882..1883 | 100 | Plus |
Translation from 234 to 1433
> RE68347.pep MGSRPQRIRRIGDSLQMLTREARSEVVRYEHIVICLMVMIAVFSILWNIT LIMISGDLYEGIVSAKLIFRERSVDKMDESSKEILHRDFIKATQYAYGRQ YSVQDVTPESLKSESQIFKLPHIYESIENRPKLERLIAENKVEVISTTTT PPPKITFNAEADRHFLSTMSIDVMATVWERGPGAQFVYVFPLISEIVAII WTAMCLIYQTGSKKSSVLPKPWRIVVPSIVIFSVMSLCSVIYTILTNGHL KHLCGQLRENLTDPTAITCGDAIALLRPIIHDHNVSHDTYLELFRFSYLI GMVLWIVALLVMVLRYVFAVDFQLVDIDDMFDSGRNGSAQVQIQPVYTEV VQQSSPQHQTQMRPRSEDDYQSARSHLSDLAVPLLEVQSQSQIPPTSLA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23264-PA | 402 | GF23264-PA | 1..402 | 1..399 | 1627 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11516-PA | 399 | GG11516-PA | 1..399 | 1..399 | 1844 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18627-PA | 409 | GH18627-PA | 6..391 | 1..389 | 1210 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14253-PB | 399 | CG14253-PB | 1..399 | 1..399 | 2031 | 100 | Plus |
CG14253-PF | 390 | CG14253-PF | 15..390 | 24..399 | 1892 | 98.4 | Plus |
CG14253-PA | 390 | CG14253-PA | 15..390 | 24..399 | 1892 | 98.4 | Plus |
CG14253-PD | 390 | CG14253-PD | 15..390 | 24..399 | 1892 | 98.4 | Plus |
CG14253-PE | 390 | CG14253-PE | 15..390 | 24..399 | 1892 | 98.4 | Plus |
CG14253-PC | 390 | CG14253-PC | 15..390 | 24..399 | 1892 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24298-PA | 408 | GI24298-PA | 6..387 | 1..390 | 1288 | 62.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23892-PA | 404 | GL23892-PA | 1..404 | 1..399 | 1644 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27090-PA | 404 | GA27090-PA | 1..404 | 1..399 | 1652 | 77.5 | Plus |
Dpse\GA27090-PB | 395 | GA27090-PB | 15..395 | 24..399 | 1528 | 75.6 | Plus |
Dpse\GA22497-PA | 395 | GA22497-PA | 15..395 | 24..399 | 1528 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10356-PA | 399 | GM10356-PA | 1..399 | 1..399 | 1964 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21318-PA | 399 | GD21318-PA | 1..399 | 1..399 | 1976 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23076-PA | 406 | GJ23076-PA | 2..389 | 3..389 | 1191 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11380-PA | 402 | GK11380-PA | 9..396 | 1..386 | 1217 | 60.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23704-PA | 399 | GE23704-PA | 1..399 | 1..399 | 1985 | 93.5 | Plus |
Translation from 234 to 1433
> RE68347.hyp MGSRPQRIRRIGDSLQMLTREARSEVVRYEHIVICLMVMIAVFSILWNIT LIMISGDLYEGIVSAKLIFRERSVDKMDESSKEILHRDFIKATQYAYGRQ YSVQDVTPESLKSESQIFKLPHIYESIENRPKLERLIAENKVEVISTTTT PPPKITFNAEADRHFLSTMSIDVMATVWERGPGAQFVYVFPLISEIVAII WTAMCLIYQTGSKKSSVLPKPWRIVVPSIVIFSVMSLCSVIYTILTNGHL KHLCGQLRENLTDPTAITCGDAIALLRPIIHDHNVSHDTYLELFRFSYLI GMVLWIVALLVMVLRYVFAVDFQLVDIDDMFDSGRNGSAQVQIQPVYTEV VQQSSPQHQTQMRPRSEDDYQSARSHLSDLAVPLLEVQSQSQIPPTSLA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14253-PB | 399 | CG14253-PB | 1..399 | 1..399 | 2031 | 100 | Plus |
CG14253-PF | 390 | CG14253-PF | 15..390 | 24..399 | 1892 | 98.4 | Plus |
CG14253-PA | 390 | CG14253-PA | 15..390 | 24..399 | 1892 | 98.4 | Plus |
CG14253-PD | 390 | CG14253-PD | 15..390 | 24..399 | 1892 | 98.4 | Plus |
CG14253-PE | 390 | CG14253-PE | 15..390 | 24..399 | 1892 | 98.4 | Plus |