BDGP Sequence Production Resources |
Search the DGRC for RE68357
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 683 |
Well: | 57 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG10075-RA |
Protein status: | RE68357.pep: gold |
Preliminary Size: | 835 |
Sequenced Size: | 929 |
Gene | Date | Evidence |
---|---|---|
CG10075 | 2001-12-14 | Blastp of sequenced clone |
CG10075 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10075 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10075 | 2008-04-29 | Release 5.5 accounting |
CG10075 | 2008-08-15 | Release 5.9 accounting |
CG10075 | 2008-12-18 | 5.12 accounting |
929 bp (929 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071639
> RE68357.complete AGCGTTTTAGTCTGTTGTCGCGTGCAATTGGATTTTTTAAACGATTTTGT TTTAGTAAATTTAGGATACATTTAAGAATGCAGTGCACTCGTGCAGTTGC AAGACTGGCCGGCGGCCTAGCGAGAACCGCATGGGCAACACAACATACGT ATAAGCACAGGCCAGCGATACTGGGACTGCTGGAGCAGCCATGCCGCTTG TGTTCATCCACCGGCGTTGTGGATAATACCAATAAAACGAAACCCGGCAC AGCGGAAGCCGCAGAAGGCGGTATTCTGAAGAGAGTGCTCAACAAAGTGG GCTTCACACCGAACACAAAGGCGCGCCTCAAGGTAACCAGTCATCTGCTG TACGAAAGCGTCGCCGACAAGATCAACTATGTGACCTTTTTCCGCGACTT CAATCTGCCCAATACCTTTAACTCCTGGTTCTTGGTCACCGAACTGCATG TTTGGCTACTCCTGATGCGCTCCATGGCCGAGGGCTCCGAAACGGGCGAG GATGGACGCTTCCTGCGCAACTGCATTGTGGAGGCGATGTGGGGAGATGT TAACACACGCGCCAAGAAATTGGGAGCTCACAATCCTTCACGCACCCGTC AGCAAATCGAGACCTTATCCGAGCAGTTCCAAGCGGCCCTAATCGCCTAC GACGAGGGCATCATGTCCGACGATCGGGTTTTGGCCTGCGCCTTGTGGCG CCGCTTCTTCGAGATGAACTGTGATGATTACGCGCAGATCGAGCGACTGG TGAAGTACGTCCGCCAGCAGGCCAGCATGCTGGACAGTTTGCCACGCGAT CAGTTCATTGTCAAGCCGAAAGTGGCATGGTTGGAATTGGACAAGTGCAA GGTTTAATCTTAGTTATATTCTGTTTTTTAAAAATAAAGTTTGAGAGTAT GTGAACTGGAAACTAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10075-RA | 983 | CG10075-RA | 73..983 | 4..914 | 4540 | 99.8 | Plus |
CG9948.b | 1462 | CG9948.b | 829..1168 | 915..576 | 1685 | 99.7 | Minus |
CG9948-RA | 1503 | CG9948-RA | 870..1209 | 915..576 | 1685 | 99.7 | Minus |
CG9948.b | 1462 | CG9948.b | 1235..1462 | 576..349 | 1140 | 100 | Minus |
CG9948-RA | 1503 | CG9948-RA | 1276..1503 | 576..349 | 1140 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 6949237..6949575 | 914..576 | 1680 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 6949642..6949895 | 576..323 | 1270 | 100 | Minus |
chr3L | 24539361 | chr3L | 6949954..6950143 | 323..134 | 950 | 100 | Minus |
chr3L | 24539361 | chr3L | 6950255..6950386 | 135..4 | 660 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 6956945..6957284 | 915..576 | 1685 | 99.7 | Minus |
3L | 28110227 | 3L | 6957351..6957604 | 576..323 | 1270 | 100 | Minus |
3L | 28110227 | 3L | 6957663..6957852 | 323..134 | 950 | 100 | Minus |
3L | 28110227 | 3L | 6957964..6958095 | 135..4 | 660 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 6950045..6950384 | 915..576 | 1685 | 99.7 | Minus |
3L | 28103327 | 3L | 6950451..6950704 | 576..323 | 1270 | 100 | Minus |
3L | 28103327 | 3L | 6950763..6950952 | 323..134 | 950 | 100 | Minus |
3L | 28103327 | 3L | 6951064..6951195 | 135..4 | 660 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 6949237..6949575 | 576..914 | 99 | <- | Minus |
chr3L | 6949643..6949894 | 324..575 | 100 | <- | Minus |
chr3L | 6949954..6950142 | 135..323 | 100 | <- | Minus |
chr3L | 6950256..6950390 | 1..134 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10075-RA | 1..780 | 78..857 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10075-RA | 1..780 | 78..857 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10075-RA | 1..780 | 78..857 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10075-RA | 1..780 | 78..857 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10075-RA | 1..780 | 78..857 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10075-RA | 1..915 | 1..914 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10075-RA | 16..930 | 1..914 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10075-RA | 10..924 | 1..914 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10075-RA | 1..915 | 1..914 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10075-RA | 10..924 | 1..914 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6957965..6958099 | 1..134 | 99 | Minus | |
3L | 6956946..6957284 | 576..914 | 99 | <- | Minus |
3L | 6957352..6957603 | 324..575 | 100 | <- | Minus |
3L | 6957663..6957851 | 135..323 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6957965..6958099 | 1..134 | 99 | Minus | |
3L | 6956946..6957284 | 576..914 | 99 | <- | Minus |
3L | 6957352..6957603 | 324..575 | 100 | <- | Minus |
3L | 6957663..6957851 | 135..323 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6957965..6958099 | 1..134 | 99 | Minus | |
3L | 6956946..6957284 | 576..914 | 99 | <- | Minus |
3L | 6957352..6957603 | 324..575 | 100 | <- | Minus |
3L | 6957663..6957851 | 135..323 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 6950046..6950384 | 576..914 | 99 | <- | Minus |
arm_3L | 6950452..6950703 | 324..575 | 100 | <- | Minus |
arm_3L | 6950763..6950951 | 135..323 | 100 | <- | Minus |
arm_3L | 6951065..6951199 | 1..134 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6950452..6950703 | 324..575 | 100 | <- | Minus |
3L | 6950046..6950384 | 576..914 | 99 | <- | Minus |
3L | 6950763..6950951 | 135..323 | 100 | <- | Minus |
3L | 6951065..6951199 | 1..134 | 99 | Minus |
Translation from 0 to 856
> RE68357.hyp SCFSLLSRAIGFFKRFCFSKFRIHLRMQCTRAVARLAGGLARTAWATQHT YKHRPAILGLLEQPCRLCSSTGVVDNTNKTKPGTAEAAEGGILKRVLNKV GFTPNTKARLKVTSHLLYESVADKINYVTFFRDFNLPNTFNSWFLVTELH VWLLLMRSMAEGSETGEDGRFLRNCIVEAMWGDVNTRAKKLGAHNPSRTR QQIETLSEQFQAALIAYDEGIMSDDRVLACALWRRFFEMNCDDYAQIERL VKYVRQQASMLDSLPRDQFIVKPKVAWLELDKCKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10075-PA | 259 | CG10075-PA | 1..259 | 27..285 | 1361 | 100 | Plus |
Translation from 77 to 856
> RE68357.pep MQCTRAVARLAGGLARTAWATQHTYKHRPAILGLLEQPCRLCSSTGVVDN TNKTKPGTAEAAEGGILKRVLNKVGFTPNTKARLKVTSHLLYESVADKIN YVTFFRDFNLPNTFNSWFLVTELHVWLLLMRSMAEGSETGEDGRFLRNCI VEAMWGDVNTRAKKLGAHNPSRTRQQIETLSEQFQAALIAYDEGIMSDDR VLACALWRRFFEMNCDDYAQIERLVKYVRQQASMLDSLPRDQFIVKPKVA WLELDKCKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10883-PA | 259 | GF10883-PA | 1..259 | 1..259 | 1175 | 83.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15017-PA | 259 | GG15017-PA | 1..259 | 1..259 | 1335 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16104-PA | 259 | GH16104-PA | 1..257 | 1..259 | 1069 | 79.3 | Plus |
Dgri\GH22579-PA | 216 | GH22579-PA | 1..214 | 44..259 | 1010 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10075-PA | 259 | CG10075-PA | 1..259 | 1..259 | 1361 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12368-PA | 260 | GI12368-PA | 1..258 | 1..259 | 1068 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15064-PA | 259 | GL15064-PA | 1..259 | 1..259 | 1141 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10052-PA | 259 | GA10052-PA | 1..259 | 1..259 | 1140 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13807-PA | 233 | GM13807-PA | 2..231 | 30..259 | 1223 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13104-PA | 259 | GD13104-PA | 1..259 | 1..259 | 1376 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12261-PA | 261 | GJ12261-PA | 1..259 | 1..259 | 1105 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17199-PA | 257 | GK17199-PA | 1..257 | 1..259 | 1123 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20459-PA | 259 | GE20459-PA | 1..259 | 1..259 | 1322 | 94.6 | Plus |