BDGP Sequence Production Resources |
Search the DGRC for RE68446
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 684 |
Well: | 46 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG31516-RA |
Protein status: | RE68446.pep: gold |
Sequenced Size: | 1687 |
Gene | Date | Evidence |
---|---|---|
CG31516 | 2002-11-02 | Blastp of sequenced clone |
CG31516 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31516 | 2008-04-29 | Release 5.5 accounting |
CG31516 | 2008-08-15 | Release 5.9 accounting |
CG31516 | 2008-12-18 | 5.12 accounting |
1687 bp (1687 high quality bases) assembled on 2002-11-02
GenBank Submission: BT001717
> RE68446.complete AGTTTCAGATGACCGATATGGCCGTAAGTTTGCGCAAACCGAGCTCCGCT TATTTTGGACATTGAAGTTAAGCTTGCAATTTGCTGTGTGCACCTGGCCA GTTTCACGTAACGCGTGGAGATTTGTCGAATGCAAAATACACAACCTTAT CAGTGTACTAATTACCACCGCCCTACTCCCACGTTGTATCGATGCCCCCG ATCTAGCATTGACACAATTTTCAGGGAGCCGCATTCGGCCAAAGCCGTTT AATGTAAGACAATAAAAATAAACATTTTCCGCGCCATTTGGTGCGCCTGC AAAGCGGTCGGGGTCGTGGAAAACCCCTCTGTAGGCAAACAGCGGGAGCA TTCTGTTTGCACAACTGCAGCCGAGAGCACGCTATAGAAAAAACCCCGAG ACCCCTGGATCTGGACTTTGAAACTATAGCCACCATGTGCCGGCGACTAA GAAATATCCCCGGACTGATCTGCCTGCTGACGACGGTCGTCGTGCCCTGT CGGACGGAGTTCTACGCTCTAGACGCGCTGGGGCGGGATCCGAGTCCCGC TGATTTTCCGGGTGCAGTGCCACGACTGGTTATCTACAACCCCTTTAGTG GCCAACAGCTGGAGCCGCTGCGGTACTCGGCTGTTTCGCGGGGCAGACGG CAGCCCGTGAACGGTAACATCGTAGAGCTACCCCAGCTCTGGCAGCCCTG CTCCTGCGTCGAGTTCTCTTGCCGGTGCTGCCTTGGCCTGGCTCTGGGAC TCGGCGAATCAGCCAACCAGCGGTTGTGCGCCGCCCTCGACTACACCCGG GCGGATCTAGGTCTGCGCCTCAGCGTCGAGATAAACCAGCGCAAGGTGGC AACCTTCGGGTTCTCGACTCGAAATCCGCCCGAATACTGCGTGCCGCTGC CGCTCTCCAGCTGCCTCAGACTCTACGACATCCGTGCGTTCGGCGAGGGC AACATGCAGATATGTCTGTCGGTGGTCTTTAAAGTTCTGGCCAGCCAGTT CTTCGAGTACCGCTTCAGCTGCCTGCGCTTTGGCGCCAGAGGAGTATTCT TCGTTCGCGACGCACTGCAGGATCAGGGGCAGGATCAGGAAGCACTGGAG GTGGGGTCTAGGTCCGATGCGTGGCAGTATACGCCAAAGAAGCTGGCTGA CAGGAGCATCTTCAGTTTCTACGGCAGATAATATTGGTCTTTCCTCTCAC GCTTCAAGTTGTCATGTTCCGTGGATGCCTCGCAATGTTACATGTTTAAT GAAAAAGTGAAATTTACGTTAATTAAAAAGCCTTTAACTCTAAGACCCCG CCCAGCAGCACAGACGCCATGAATATGGCGAAAATTGGCAGTAAACTGTG GCCTCCCTTGGTCTGGTACGGGCGATGATGCGACTGCTTGGATCTTATCC CACTTACGAATGTACCAACGGCTGTAATCGTTCTTCAAACCACTTTTTTT TAACGATAGCGCACACAGCAATTACTTCTCTGTTTACTTAAGATTCAAAT ATGTAGTGAGAGGCGCCGGCCCTTGAACCTATTAGGCTGCGAATGATTAT GAAGTGACCAAGGGTCTCATATTATAAATAATATATTAGTTCCCCCACAT ATGACTGTTGTTATTTGATGTTATTTGAGTTTTAAAAATATATTAAATGA AATAAATTTTAGTGCACCACAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31516-RA | 1674 | CG31516-RA | 1..1669 | 1..1669 | 8330 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 44184..45852 | 1669..1 | 8330 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 4218462..4220130 | 1669..1 | 8330 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 3959293..3960961 | 1669..1 | 8330 | 99.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 44224..45852 | 1..1629 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31516-RA | 1..747 | 435..1181 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31516-RA | 1..747 | 435..1181 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31516-RA | 1..747 | 435..1181 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31516-RA | 1..747 | 435..1181 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31516-RA | 1..747 | 435..1181 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31516-RA | 1..1669 | 1..1670 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31516-RA | 1..1669 | 1..1670 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31516-RA | 1..1668 | 1..1668 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31516-RA | 1..1669 | 1..1670 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31516-RA | 1..1668 | 1..1668 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4218461..4220130 | 1..1670 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4218461..4220130 | 1..1670 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4218461..4220130 | 1..1670 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 44183..45852 | 1..1670 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 3959292..3960961 | 1..1670 | 99 | Minus |
Translation from 434 to 1180
> RE68446.pep MCRRLRNIPGLICLLTTVVVPCRTEFYALDALGRDPSPADFPGAVPRLVI YNPFSGQQLEPLRYSAVSRGRRQPVNGNIVELPQLWQPCSCVEFSCRCCL GLALGLGESANQRLCAALDYTRADLGLRLSVEINQRKVATFGFSTRNPPE YCVPLPLSSCLRLYDIRAFGEGNMQICLSVVFKVLASQFFEYRFSCLRFG ARGVFFVRDALQDQGQDQEALEVGSRSDAWQYTPKKLADRSIFSFYGR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17281-PA | 265 | GF17281-PA | 3..233 | 5..228 | 677 | 63.2 | Plus |
Dana\GF22613-PA | 695 | GF22613-PA | 46..192 | 66..207 | 186 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11785-PA | 248 | GG11785-PA | 1..248 | 1..248 | 1024 | 82.3 | Plus |
Dere\GG18181-PA | 769 | GG18181-PA | 46..237 | 66..241 | 214 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24068-PA | 437 | GH24068-PA | 46..192 | 66..207 | 215 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31516-PA | 248 | CG31516-PA | 1..248 | 1..248 | 1315 | 100 | Plus |
CG8568-PA | 759 | CG8568-PA | 46..227 | 66..232 | 198 | 27 | Plus |
CG34038-PC | 237 | CG34038-PC | 80..198 | 88..207 | 148 | 29 | Plus |
CG34038-PB | 271 | CG34038-PB | 114..232 | 88..207 | 148 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24747-PA | 190 | GI24747-PA | 1..181 | 41..229 | 292 | 35.8 | Plus |
Dmoj\GI14647-PA | 585 | GI14647-PA | 55..241 | 66..240 | 210 | 28.5 | Plus |
Dmoj\GI10450-PA | 153 | GI10450-PA | 7..152 | 65..206 | 151 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12340-PA | 241 | GL12340-PA | 10..201 | 36..216 | 646 | 66.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16293-PA | 274 | GA16293-PA | 43..234 | 36..216 | 653 | 66.7 | Plus |
Dpse\GA21170-PA | 637 | GA21170-PA | 49..195 | 66..207 | 194 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10724-PA | 182 | GM10724-PA | 1..175 | 1..175 | 824 | 89.7 | Plus |
Dsec\GM13313-PA | 760 | GM13313-PA | 46..227 | 66..232 | 209 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19698-PA | 244 | GD19698-PA | 1..244 | 1..248 | 1151 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14574-PA | 218 | GJ14574-PA | 38..210 | 49..228 | 326 | 38.6 | Plus |
Dvir\GJ19296-PA | 551 | GJ19296-PA | 48..194 | 66..207 | 206 | 31.3 | Plus |
Translation from 434 to 1180
> RE68446.hyp MCRRLRNIPGLICLLTTVVVPCRTEFYALDALGRDPSPADFPGAVPRLVI YNPFSGQQLEPLRYSAVSRGRRQPVNGNIVELPQLWQPCSCVEFSCRCCL GLALGLGESANQRLCAALDYTRADLGLRLSVEINQRKVATFGFSTRNPPE YCVPLPLSSCLRLYDIRAFGEGNMQICLSVVFKVLASQFFEYRFSCLRFG ARGVFFVRDALQDQGQDQEALEVGSRSDAWQYTPKKLADRSIFSFYGR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31516-PA | 248 | CG31516-PA | 1..248 | 1..248 | 1315 | 100 | Plus |
CG8568-PA | 759 | CG8568-PA | 46..227 | 66..232 | 198 | 27 | Plus |
CG34038-PC | 237 | CG34038-PC | 80..198 | 88..207 | 148 | 29 | Plus |
CG34038-PB | 271 | CG34038-PB | 114..232 | 88..207 | 148 | 29 | Plus |