BDGP Sequence Production Resources |
Search the DGRC for RE68592
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 685 |
Well: | 92 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG1673-RA |
Protein status: | RE68592.pep: gold |
Preliminary Size: | 1125 |
Sequenced Size: | 2525 |
Gene | Date | Evidence |
---|---|---|
CG1673 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1673 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1673 | 2003-02-21 | Blastp of sequenced clone |
CG1673 | 2008-04-29 | Release 5.5 accounting |
CG1673 | 2008-08-15 | Release 5.9 accounting |
CG1673 | 2008-12-18 | 5.12 accounting |
2525 bp (2525 high quality bases) assembled on 2003-02-21
GenBank Submission: BT004848
> RE68592.complete ATTTTCTTGCAGAGACTTCGTGCCGTGAAGATCGAACTGAGAAAAGAAAA AGAGCAGAAGCAGAAGGGCTGTAGAAAGAAAAAAAGAAAGTAAATCCATA CACCGAAATAAAACACAACTGCGTGCTTTAAGAATTTTTTTTTTACTGTG CAAAGTGCAGCAGTTCCTTGCTCATTAAACTAGAACCAAGAAATACAATA TTTAACGCGTCAGTTCGCGTAAGTGCGGCAAAGTGCGAGTGCAAGAGACG CTAAACGAGCGATACAAAAAAAAAAAAAAAAACGGAAATTTCGTAGAGCA GCAAAGCGAGTCCAAATCCAAAAGTTTCTGAAAGTAACGAGACAGAAGAT TTCGCAGCCAAATTCAACAAGATGACGACCAAAATGGCAATTAACGCAAA GGATATTTTCCGCAATCAGCATCGCCTGATCCGCTTCCTCGAGCAGTCGA TCCGGTTGTGCAGCAACCAGTCTCTGAAAGCCGCCCAAGCGGCACAGTTG CAACAGAAATCGTCGGCGGACTTCGAGATCACCGCCTCGCTGGACGCCCA ATACACCAGTGCCCCGGAGCCCATTAAGCATGACAAGAATCTGGGTCATC AGTTCCGTGCCTCACAGATTTCCGTGCGACTGGCCGCACCGGAGCAACTG CAGCCCAAGCCGGACAACGATGAGGAATTGGGTTTCGGCCGCCTATTCAC CGATCACATGCTCAAGATCTACTACCACAAGAGTTTGGGCGGATGGCAGC GACCGGAGATTACGCCGCTGGAGAATCTAGTGATGCATCCCGCCGCCAAG GTCCTGCACTACGCCGTTGAGCTCTTTGAGGGCATGAAGGCGTACCGCGG CGTCGATGGCAAGATCCGCATCTTCCGGCCGGACATGAACATGAACCGCA TGAACCTGGCCGCCCAGCGATCCGGTCTGCCCACCTTCGAGGGCAAGGAG TTCGTCCAGTGCCTGTCCCGCCTGCTGTCCATTGATTCCGAGTGGGTTCC TCACACGGACACCGCCAGCTTGTACATCCGCCCCACACTGATCGGCATTG ATCCCACACTGGGAGTTGCTTCCTCCGACTCGGCCCTGCTCTACACGATC CTCAGCCCCGTGGGCAGTTACTTTAAGACAGGCTCGTCCGGTGCCGTCTC CCTGCTGGCCGATCCCAGTTATGTTCGTGCCTGGCCAGGCGGCGTGGGCA ATCGCAAAATGGGCTCCAACTACGCACCCACAATCAATGTGCAGAAGGAG GCGGCCGCCAAGGGACTGCAGCAGGTGCTGTGGCTCTACGGCGAGGATCA TCAGCTAACCGAAGTGGGCACCATGAACATCTTTATGTTCTTCGTGAACG ATCAAGGAGAACAAGAACTGGTTACCCCACCGCTGAGCGGTCTAATCCTG CCCGGTATCACCCGCGACTCCATCCTGCGCATGACCCGCCAGTGGGGCAA GTTTAAGGTTAGCGAGGCGAACATCACCATGCCCATGGTCTGTGAGCTCC TCAACCAGGGAAGGCTGCTGGAGCTCTTTGGTGCGGGAACGGCGTGCGTG GTTAGCCCCGTGAACAGGATCAGCTACCTTGGCCAGGATCTGTATATACC CACCATGGAGCAGGAGAAGCCCGTTCACGAGCTGATCCGCGAAACGCTCA CCGACATTCAGTACGGTCGGGTGGATCATCCGTGGGCGGTGGTGATCGAC TAAGTCGATCTCCCAGCCGATCCCAGCCAGAAAGCATCCAACCCCAGAGC TGTTACCCTTTCCCGTTACCTTACCGCATCCCTTTCCCGTACCGTGTATT AGTAGGATTTAGTGCCAAGTGTTTTGTGGGTCGCCAATGTGCTCGAATTT GTTTCGTTTATTGTGCATGTGTCTATATGCTTGCATATATCGGATATGTA CAATATATATATATATATATATATTATATAATATAGTAGGATATAAGTCG AGGGCCGATTCGTTAAGTTGCATTTAAATGTATATTTATTTATTTATGTC AGGAATTCGAATTGTACATAATTCCAACTGGTTCAATGTTATTTATAGTT TCCCTAATTATTTTCATATTTTTAGTTGTGCGCCTTTAGATATATATATA TATATTTTTTTTTTTTTTACTTTATCTAAAGCTATGAATCGTCTTTTTGC GCTTTTACTTCCAAGCAGCATCGAAAGCAAGGTAAAATTACCAACTACAA ATTTTAGGACTAGTATAAAGAGATCGAGAATTCCCCCATCCAAGTGACGG GAATTAATTGAAAACGTACCGGAGGCGAAATGCATTTATTAGTGAGTAAG TGATCGAAGCGTTCTTGGAGGTAAAAGCGGCACGAGAGGCACGAGGGCAG CAGCCGAGCTGAGCTGTGACTAAAGCTAATCTGAACCTGAACCCGTCAGT AGAACCTAGGCCTAGGCTGTAGATACTAAACCCGAATCAAGCTGTATACT ATATCTGTAACACCTAGTTGATAAGCGAACCAAGCGATGAATAAACGATG ACAAAAATCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1673-RA | 2572 | CG1673-RA | 12..2518 | 3..2511 | 12490 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13290999..13291994 | 1514..2509 | 4965 | 99.9 | Plus |
chrX | 22417052 | chrX | 13289356..13289777 | 400..821 | 2080 | 99.5 | Plus |
chrX | 22417052 | chrX | 13287679..13288072 | 3..402 | 1810 | 98 | Plus |
chrX | 22417052 | chrX | 13290403..13290709 | 1053..1359 | 1535 | 100 | Plus |
chrX | 22417052 | chrX | 13290102..13290334 | 820..1052 | 1150 | 99.6 | Plus |
chrX | 22417052 | chrX | 13290775..13290931 | 1358..1514 | 785 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 13400229..13401226 | 1514..2511 | 4990 | 100 | Plus |
X | 23542271 | X | 13398583..13399004 | 400..821 | 2110 | 100 | Plus |
X | 23542271 | X | 13396904..13397301 | 3..402 | 1935 | 99.5 | Plus |
X | 23542271 | X | 13399633..13399939 | 1053..1359 | 1535 | 100 | Plus |
X | 23542271 | X | 13399329..13399561 | 820..1052 | 1165 | 100 | Plus |
X | 23542271 | X | 13400005..13400161 | 1358..1514 | 785 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 13408327..13409324 | 1514..2511 | 4990 | 100 | Plus |
X | 23527363 | X | 13406681..13407102 | 400..821 | 2110 | 100 | Plus |
X | 23527363 | X | 13405002..13405399 | 3..402 | 1945 | 99.5 | Plus |
X | 23527363 | X | 13407731..13408037 | 1053..1359 | 1535 | 100 | Plus |
X | 23527363 | X | 13407427..13407659 | 820..1052 | 1165 | 100 | Plus |
X | 23527363 | X | 13408103..13408259 | 1358..1514 | 785 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tirant | 8526 | Tirant TIRANT 8526bp | 458..686 | 2168..1937 | 124 | 56.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13287678..13288071 | 1..401 | 97 | -> | Plus |
chrX | 13289358..13289777 | 402..821 | 99 | -> | Plus |
chrX | 13290104..13290334 | 822..1052 | 99 | -> | Plus |
chrX | 13290403..13290709 | 1053..1359 | 100 | -> | Plus |
chrX | 13290777..13290931 | 1360..1514 | 100 | -> | Plus |
chrX | 13291000..13291994 | 1515..2509 | 93 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1673-RA | 1..1332 | 372..1703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1673-RA | 1..1332 | 372..1703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1673-RA | 1..1332 | 372..1703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1673-RA | 1..1332 | 372..1703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1673-RA | 1..1332 | 372..1703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1673-RA | 11..2516 | 1..2509 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1673-RA | 11..2516 | 1..2509 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1673-RA | 5..2510 | 1..2509 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1673-RA | 11..2516 | 1..2509 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1673-RA | 5..2510 | 1..2509 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13396903..13397300 | 1..401 | 99 | -> | Plus |
X | 13398585..13399004 | 402..821 | 100 | -> | Plus |
X | 13399331..13399561 | 822..1052 | 100 | -> | Plus |
X | 13399633..13399939 | 1053..1359 | 100 | -> | Plus |
X | 13400007..13400161 | 1360..1514 | 100 | -> | Plus |
X | 13400230..13401224 | 1515..2509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13396903..13397300 | 1..401 | 99 | -> | Plus |
X | 13398585..13399004 | 402..821 | 100 | -> | Plus |
X | 13399331..13399561 | 822..1052 | 100 | -> | Plus |
X | 13399633..13399939 | 1053..1359 | 100 | -> | Plus |
X | 13400007..13400161 | 1360..1514 | 100 | -> | Plus |
X | 13400230..13401224 | 1515..2509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13396903..13397300 | 1..401 | 99 | -> | Plus |
X | 13398585..13399004 | 402..821 | 100 | -> | Plus |
X | 13399331..13399561 | 822..1052 | 100 | -> | Plus |
X | 13399633..13399939 | 1053..1359 | 100 | -> | Plus |
X | 13400007..13400161 | 1360..1514 | 100 | -> | Plus |
X | 13400230..13401224 | 1515..2509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13294040..13294194 | 1360..1514 | 100 | -> | Plus |
arm_X | 13290936..13291333 | 1..401 | 99 | -> | Plus |
arm_X | 13292618..13293037 | 402..821 | 100 | -> | Plus |
arm_X | 13293364..13293594 | 822..1052 | 100 | -> | Plus |
arm_X | 13293666..13293972 | 1053..1359 | 100 | -> | Plus |
arm_X | 13294263..13295257 | 1515..2509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13405001..13405398 | 1..401 | 99 | -> | Plus |
X | 13406683..13407102 | 402..821 | 100 | -> | Plus |
X | 13407429..13407659 | 822..1052 | 100 | -> | Plus |
X | 13407731..13408037 | 1053..1359 | 100 | -> | Plus |
X | 13408105..13408259 | 1360..1514 | 100 | -> | Plus |
X | 13408328..13409322 | 1515..2509 | 100 | Plus |
Translation from 371 to 1702
> RE68592.pep MTTKMAINAKDIFRNQHRLIRFLEQSIRLCSNQSLKAAQAAQLQQKSSAD FEITASLDAQYTSAPEPIKHDKNLGHQFRASQISVRLAAPEQLQPKPDND EELGFGRLFTDHMLKIYYHKSLGGWQRPEITPLENLVMHPAAKVLHYAVE LFEGMKAYRGVDGKIRIFRPDMNMNRMNLAAQRSGLPTFEGKEFVQCLSR LLSIDSEWVPHTDTASLYIRPTLIGIDPTLGVASSDSALLYTILSPVGSY FKTGSSGAVSLLADPSYVRAWPGGVGNRKMGSNYAPTINVQKEAAAKGLQ QVLWLYGEDHQLTEVGTMNIFMFFVNDQGEQELVTPPLSGLILPGITRDS ILRMTRQWGKFKVSEANITMPMVCELLNQGRLLELFGAGTACVVSPVNRI SYLGQDLYIPTMEQEKPVHELIRETLTDIQYGRVDHPWAVVID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19410-PA | 442 | GF19410-PA | 1..442 | 1..443 | 2272 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17780-PA | 439 | GG17780-PA | 1..439 | 5..443 | 2340 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24496-PA | 445 | GH24496-PA | 1..445 | 1..443 | 2117 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1673-PA | 443 | CG1673-PA | 1..443 | 1..443 | 2299 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15251-PA | 443 | GI15251-PA | 1..443 | 1..443 | 2172 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26922-PA | 443 | GL26922-PA | 1..443 | 1..443 | 2184 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14112-PA | 443 | GA14112-PA | 1..443 | 1..443 | 2184 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11632-PA | 443 | GM11632-PA | 1..443 | 1..443 | 2362 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17125-PA | 180 | GD17125-PA | 1..180 | 264..443 | 965 | 98.3 | Plus |
Dsim\GD18219-PA | 164 | GD18219-PA | 1..164 | 280..443 | 873 | 98.2 | Plus |
Dsim\GD17124-PA | 135 | GD17124-PA | 1..36 | 1..36 | 187 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14823-PA | 438 | GJ14823-PA | 1..438 | 5..443 | 2126 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25289-PA | 443 | GK25289-PA | 1..443 | 1..443 | 2179 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17074-PA | 438 | GE17074-PA | 1..438 | 5..443 | 2299 | 97 | Plus |
Translation from 371 to 1702
> RE68592.hyp MTTKMAINAKDIFRNQHRLIRFLEQSIRLCSNQSLKAAQAAQLQQKSSAD FEITASLDAQYTSAPEPIKHDKNLGHQFRASQISVRLAAPEQLQPKPDND EELGFGRLFTDHMLKIYYHKSLGGWQRPEITPLENLVMHPAAKVLHYAVE LFEGMKAYRGVDGKIRIFRPDMNMNRMNLAAQRSGLPTFEGKEFVQCLSR LLSIDSEWVPHTDTASLYIRPTLIGIDPTLGVASSDSALLYTILSPVGSY FKTGSSGAVSLLADPSYVRAWPGGVGNRKMGSNYAPTINVQKEAAAKGLQ QVLWLYGEDHQLTEVGTMNIFMFFVNDQGEQELVTPPLSGLILPGITRDS ILRMTRQWGKFKVSEANITMPMVCELLNQGRLLELFGAGTACVVSPVNRI SYLGQDLYIPTMEQEKPVHELIRETLTDIQYGRVDHPWAVVID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1673-PA | 443 | CG1673-PA | 1..443 | 1..443 | 2299 | 100 | Plus |