BDGP Sequence Production Resources |
Search the DGRC for RE68889
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 688 |
Well: | 89 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Desi-RA |
Protein status: | RE68889.pep: gold |
Sequenced Size: | 1016 |
Gene | Date | Evidence |
---|---|---|
CG14686 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14686 | 2004-04-27 | Blastp of sequenced clone |
CG14686 | 2008-04-29 | Release 5.5 accounting |
CG14686 | 2008-08-15 | Release 5.9 accounting |
CG14686 | 2008-12-18 | 5.12 accounting |
1016 bp (1016 high quality bases) assembled on 2004-04-27
GenBank Submission: BT014639
> RE68889.complete AGTGTGGAGCAGAGCGAACGACACGTTGGAGCCACGAGCCAAAAACCCCA AAGGACTATTACTAATTTACAAAAAAAAAAAAAGAAACCCAAAAGGATAC CCTCTTAAAAGAGCACAATGAACCGAAATTACATTGTCATACTGCAGCTG CTGGGAGTGTTGGTTGTGCTGACCTACGCCAGTGCAATCCCCAAATACGA AGATAGCCATAAGTTCTATGCGGATAAGGCGCAGCGGGATAGGTCGTACT TTAATGAAAACAAGACCCAGCCTAGTGAACCGCAGACAGCTTCCACGAAG GATAGACTGGAACGACTGGGCTATACCACTGGCTACGGATCCCTAAATGG TTATCCTGGCGGTACTGGACTATCCGCCTACAATCCCATAAAACTGGACC TGGGTGGCGTTGTCTTAGGAACTCTTGTGGGCATAGGTGCCATTATACTG ATTCCTAAGATTCTATCCGCCTTCCATGGTGGTTATGGAGGCTACGGCCG CAGCGAGGACAGTGACCTAACACCACTGAGCAGCATGATCAATAAGATTG ACGATGTTCTGGGCCAGAATAATATTGACTCGACGAGTTGCATGCAACGT GCTGTGTGCGGTTATGTTCGCTCTACGGAGTATAATATGAAGATCGGTTC CTCAGACCAGATGGACGAATTTATTCATATGCTAGCGGAAAATGCCCTGG TGGATTACCTCCTCGATGGAACGGCTATTAAGGAGGCATTGGAGCATGGA AAGCGAGCCAATGATCGAGCCTGTGAAGAGGTGTACTCCAATTGTCCGCT GGACAGTAAATCAGCTACGGATATTCTAATGAAGCTGATGCCAAAGAAAA ACCCACAAGGAAAAGGAAAATCATCTGGAATTTCCCGAGAAAAGAAGGTT TAGTTAATGTTGTTCTATGAAATTTTAAAAAATTGTTCTCCATTTGCATA CAACCAAATATTTTCCCAACATATAAATAAACTCCATTGTGTTATCTTTA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14686-RA | 1026 | CG14686-RA | 28..1026 | 1..999 | 4980 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 6606036..6606345 | 690..999 | 1550 | 100 | Plus |
chr3R | 27901430 | chr3R | 6605095..6605308 | 1..214 | 1055 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 6605781..6605967 | 503..689 | 935 | 100 | Plus |
chr3R | 27901430 | chr3R | 6605569..6605727 | 349..507 | 780 | 99.4 | Plus |
chr3R | 27901430 | chr3R | 6605358..6605494 | 213..349 | 685 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 10780516..10780826 | 690..1000 | 1555 | 100 | Plus |
3R | 32079331 | 3R | 10779575..10779788 | 1..214 | 1055 | 99.5 | Plus |
3R | 32079331 | 3R | 10780261..10780447 | 503..689 | 935 | 100 | Plus |
3R | 32079331 | 3R | 10780049..10780207 | 349..507 | 780 | 99.4 | Plus |
3R | 32079331 | 3R | 10779838..10779974 | 213..349 | 685 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 10521347..10521657 | 690..1000 | 1555 | 100 | Plus |
3R | 31820162 | 3R | 10520406..10520619 | 1..214 | 1055 | 99.5 | Plus |
3R | 31820162 | 3R | 10521092..10521278 | 503..689 | 935 | 100 | Plus |
3R | 31820162 | 3R | 10520880..10521038 | 349..507 | 780 | 99.3 | Plus |
3R | 31820162 | 3R | 10520669..10520805 | 213..349 | 685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 6605569..6605722 | 349..502 | 100 | -> | Plus |
chr3R | 6605781..6605967 | 503..689 | 100 | -> | Plus |
chr3R | 6606036..6606345 | 690..999 | 100 | Plus | |
chr3R | 6605095..6605306 | 1..212 | 99 | -> | Plus |
chr3R | 6605358..6605493 | 213..348 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14686-RA | 1..786 | 118..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14686-RA | 1..786 | 118..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Desi-RA | 1..786 | 118..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14686-RA | 1..786 | 118..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Desi-RA | 1..786 | 118..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14686-RA | 1..995 | 1..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14686-RA | 1..999 | 1..999 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Desi-RA | 7..1005 | 1..999 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14686-RA | 1..995 | 1..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Desi-RA | 7..1005 | 1..999 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10779575..10779786 | 1..212 | 99 | -> | Plus |
3R | 10779838..10779973 | 213..348 | 100 | -> | Plus |
3R | 10780049..10780202 | 349..502 | 100 | -> | Plus |
3R | 10780261..10780447 | 503..689 | 100 | -> | Plus |
3R | 10780516..10780825 | 690..999 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10779575..10779786 | 1..212 | 99 | -> | Plus |
3R | 10779838..10779973 | 213..348 | 100 | -> | Plus |
3R | 10780049..10780202 | 349..502 | 100 | -> | Plus |
3R | 10780261..10780447 | 503..689 | 100 | -> | Plus |
3R | 10780516..10780825 | 690..999 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10779575..10779786 | 1..212 | 99 | -> | Plus |
3R | 10779838..10779973 | 213..348 | 100 | -> | Plus |
3R | 10780049..10780202 | 349..502 | 100 | -> | Plus |
3R | 10780261..10780447 | 503..689 | 100 | -> | Plus |
3R | 10780516..10780825 | 690..999 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 6605560..6605695 | 213..348 | 100 | -> | Plus |
arm_3R | 6605771..6605924 | 349..502 | 100 | -> | Plus |
arm_3R | 6605983..6606169 | 503..689 | 100 | -> | Plus |
arm_3R | 6605297..6605508 | 1..212 | 99 | -> | Plus |
arm_3R | 6606238..6606547 | 690..999 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10520406..10520617 | 1..212 | 99 | -> | Plus |
3R | 10520669..10520804 | 213..348 | 100 | -> | Plus |
3R | 10520880..10521033 | 349..502 | 100 | -> | Plus |
3R | 10521092..10521278 | 503..689 | 100 | -> | Plus |
3R | 10521347..10521656 | 690..999 | 100 | Plus |
Translation from 117 to 902
> RE68889.pep MNRNYIVILQLLGVLVVLTYASAIPKYEDSHKFYADKAQRDRSYFNENKT QPSEPQTASTKDRLERLGYTTGYGSLNGYPGGTGLSAYNPIKLDLGGVVL GTLVGIGAIILIPKILSAFHGGYGGYGRSEDSDLTPLSSMINKIDDVLGQ NNIDSTSCMQRAVCGYVRSTEYNMKIGSSDQMDEFIHMLAENALVDYLLD GTAIKEALEHGKRANDRACEEVYSNCPLDSKSATDILMKLMPKKNPQGKG KSSGISREKKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17901-PA | 261 | GF17901-PA | 1..261 | 1..261 | 1222 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17672-PA | 261 | GG17672-PA | 1..261 | 1..261 | 1360 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18058-PA | 260 | GH18058-PA | 1..259 | 1..258 | 1021 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Desi-PA | 261 | CG14686-PA | 1..261 | 1..261 | 1349 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23735-PA | 260 | GI23735-PA | 1..255 | 1..254 | 996 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21914-PA | 261 | GL21914-PA | 1..260 | 1..260 | 1105 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22525-PA | 184 | GA22525-PA | 1..172 | 78..249 | 810 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23895-PA | 261 | GM23895-PA | 1..261 | 1..261 | 1366 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18707-PA | 261 | GD18707-PA | 1..261 | 1..261 | 1367 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10581-PA | 243 | GJ10581-PA | 2..243 | 21..261 | 967 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13896-PA | 253 | GK13896-PA | 21..252 | 21..254 | 1078 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26047-PA | 261 | GE26047-PA | 1..261 | 1..261 | 1352 | 97.7 | Plus |
Translation from 117 to 902
> RE68889.hyp MNRNYIVILQLLGVLVVLTYASAIPKYEDSHKFYADKAQRDRSYFNENKT QPSEPQTASTKDRLERLGYTTGYGSLNGYPGGTGLSAYNPIKLDLGGVVL GTLVGIGAIILIPKILSAFHGGYGGYGRSEDSDLTPLSSMINKIDDVLGQ NNIDSTSCMQRAVCGYVRSTEYNMKIGSSDQMDEFIHMLAENALVDYLLD GTAIKEALEHGKRANDRACEEVYSNCPLDSKSATDILMKLMPKKNPQGKG KSSGISREKKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Desi-PA | 261 | CG14686-PA | 1..261 | 1..261 | 1349 | 100 | Plus |