BDGP Sequence Production Resources |
Search the DGRC for RE68908
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 689 |
Well: | 8 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Adk1-RB |
Protein status: | RE68908.pep: gold |
Sequenced Size: | 1122 |
Gene | Date | Evidence |
---|---|---|
CG17146 | 2004-03-31 | Blastp of sequenced clone |
Adk1 | 2008-04-29 | Release 5.5 accounting |
Adk1 | 2008-08-15 | Release 5.9 accounting |
Adk1 | 2008-12-18 | 5.12 accounting |
1122 bp (1122 high quality bases) assembled on 2004-03-31
GenBank Submission: BT012445
> RE68908.complete AGTCACTCTCAACTCACGCAGCACAGAGGGTGGGTGGAAAACAGTCGGGC GGAGCATTCGAGAATCTGGGCGAGAATCGACCGACCAAGTGGCGCTAAGG GAAGGCTAGTAAGGCATCCGGCTAACAAACTACCGAATATTTCGCGATTT CTTCAGCGAAAGGCCCGCAGCAGCGACGTGTATATCTAGTATACATCATC ATCATCATGTTATTTATGTGTCACCAAAGGGTTATGAAGAAGGAGGCCGA GGAGAAGCTCAAAGCCGAGGAGCTCCGTAGGGCACGTGCCGCCGCTGATA TACCCATCATCTGGATCTTGGGTGGACCCGGGTGCGGCAAGGGCACTCAG TGCGCCAAAATCGTGGAAAAATACGGATTCACACATCTGAGCAGCGGCGA TTTGCTGCGCAATGAGGTGGCTTCTGGATCGGACAAGGGTCGTCAGCTGC AGGCTGTGATGGCCAGCGGTGGCCTGGTGTCCAACGACGAGGTGCTGTCC CTGCTGAACGACGCCATCACGCGGGCCAAGGGTAGCTCGAAGGGATTCCT CATCGATGGATATCCGCGTCAGAAGAACCAGGGCATTGAGTTCGAGGCGC GCATTGCACCCGCCGATCTGGCGCTGTACTTTGAGTGCTCCGAGGACACG ATGGTGCAGCGCATCATGGCACGTGCCGCTGCCTCGGCGGTGAAACGGGA CGATGACAACGAGAAGACCATTAGGGCACGCCTCCTGACCTTCAAGCAGA ACACCAATGCAATTTTGGAACTTTATGAGCCCAAAACCCTTACGATCAAT GCCGAGCGTGACGTGGACGACATCTTTCTGGAAGTCGTCCAGGCCATTGA CTGTGTGCTGAAGAAGAAGCAGCAGAATGCCGCCGCCCAGTGCTAGTAGA ATGCTAATCCATTAGGAAACCGGTACCAAAGTCAACATTTCTAGTGCACT TTTTAGCGCGAAACACACAATCTCAGAGCTGAGCACAAATGAATGCGAAA CACCAAATAAATTAGTCTAAATCTATGTTATGTTATGTTATGGCATTATC CTTTAATTCGTGACAAGCAATAATTGATCTAGTGCTTTAAATAAATTTAC ACATACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Adk1-RB | 1541 | Adk1-RB | 294..1402 | 1..1109 | 5545 | 100 | Plus |
Adk1-RA | 1457 | Adk1-RA | 503..1318 | 294..1109 | 4080 | 100 | Plus |
Adk1.a | 1019 | Adk1.a | 114..929 | 294..1109 | 4080 | 100 | Plus |
Adk1-RA | 1457 | Adk1-RA | 294..502 | 1..209 | 1045 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 12191447..12191826 | 794..415 | 1900 | 100 | Minus |
chr3L | 24539361 | chr3L | 12191062..12191374 | 1106..794 | 1535 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 12194463..12194671 | 209..1 | 1045 | 100 | Minus |
chr3L | 24539361 | chr3L | 12192107..12192231 | 418..294 | 625 | 100 | Minus |
chr3L | 24539361 | chr3L | 12192514..12192599 | 294..209 | 430 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 12200712..12201091 | 794..415 | 1900 | 100 | Minus |
3L | 28110227 | 3L | 12200324..12200639 | 1109..794 | 1580 | 100 | Minus |
3L | 28110227 | 3L | 12203719..12203927 | 209..1 | 1045 | 100 | Minus |
3L | 28110227 | 3L | 12201372..12201496 | 418..294 | 625 | 100 | Minus |
3L | 28110227 | 3L | 12201778..12201863 | 294..209 | 430 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 12193812..12194191 | 794..415 | 1900 | 100 | Minus |
3L | 28103327 | 3L | 12193424..12193739 | 1109..794 | 1580 | 100 | Minus |
3L | 28103327 | 3L | 12196819..12197027 | 209..1 | 1045 | 100 | Minus |
3L | 28103327 | 3L | 12194472..12194596 | 418..294 | 625 | 100 | Minus |
3L | 28103327 | 3L | 12194878..12194963 | 294..209 | 430 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 12191062..12191373 | 795..1106 | 99 | <- | Minus |
chr3L | 12191447..12191824 | 417..794 | 100 | <- | Minus |
chr3L | 12192109..12192231 | 294..416 | 100 | <- | Minus |
chr3L | 12192515..12192598 | 210..293 | 100 | <- | Minus |
chr3L | 12194463..12194671 | 1..209 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adk1-RB | 1..690 | 207..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adk1-RB | 1..690 | 207..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adk1-RB | 1..690 | 207..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adk1-RB | 1..690 | 207..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adk1-RB | 1..690 | 207..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adk1-RB | 156..1192 | 1..1037 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adk1-RB | 156..1192 | 1..1037 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adk1-RB | 156..1261 | 1..1106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adk1-RB | 156..1192 | 1..1037 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Adk1-RB | 156..1261 | 1..1106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12200327..12200638 | 795..1106 | 100 | <- | Minus |
3L | 12200712..12201089 | 417..794 | 100 | <- | Minus |
3L | 12201374..12201496 | 294..416 | 100 | <- | Minus |
3L | 12201779..12201862 | 210..293 | 100 | <- | Minus |
3L | 12203719..12203927 | 1..209 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12200327..12200638 | 795..1106 | 100 | <- | Minus |
3L | 12200712..12201089 | 417..794 | 100 | <- | Minus |
3L | 12201374..12201496 | 294..416 | 100 | <- | Minus |
3L | 12201779..12201862 | 210..293 | 100 | <- | Minus |
3L | 12203719..12203927 | 1..209 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12200327..12200638 | 795..1106 | 100 | <- | Minus |
3L | 12200712..12201089 | 417..794 | 100 | <- | Minus |
3L | 12201374..12201496 | 294..416 | 100 | <- | Minus |
3L | 12201779..12201862 | 210..293 | 100 | <- | Minus |
3L | 12203719..12203927 | 1..209 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 12193427..12193738 | 795..1106 | 100 | <- | Minus |
arm_3L | 12193812..12194189 | 417..794 | 100 | <- | Minus |
arm_3L | 12194474..12194596 | 294..416 | 100 | <- | Minus |
arm_3L | 12194879..12194962 | 210..293 | 100 | <- | Minus |
arm_3L | 12196819..12197027 | 1..209 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12193427..12193738 | 795..1106 | 100 | <- | Minus |
3L | 12193812..12194189 | 417..794 | 100 | <- | Minus |
3L | 12194474..12194596 | 294..416 | 100 | <- | Minus |
3L | 12194879..12194962 | 210..293 | 100 | <- | Minus |
3L | 12196819..12197027 | 1..209 | 100 | Minus |
Translation from 206 to 895
> RE68908.pep MLFMCHQRVMKKEAEEKLKAEELRRARAAADIPIIWILGGPGCGKGTQCA KIVEKYGFTHLSSGDLLRNEVASGSDKGRQLQAVMASGGLVSNDEVLSLL NDAITRAKGSSKGFLIDGYPRQKNQGIEFEARIAPADLALYFECSEDTMV QRIMARAAASAVKRDDDNEKTIRARLLTFKQNTNAILELYEPKTLTINAE RDVDDIFLEVVQAIDCVLKKKQQNAAAQC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24995-PA | 223 | GF24995-PA | 3..223 | 10..229 | 956 | 85.5 | Plus |
Dana\GF18220-PA | 196 | GF18220-PA | 8..187 | 34..210 | 296 | 36.6 | Plus |
Dana\GF24994-PA | 555 | GF24994-PA | 345..550 | 3..223 | 257 | 26.2 | Plus |
Dana\GF12891-PA | 240 | GF12891-PA | 23..234 | 37..222 | 243 | 29 | Plus |
Dana\GF18267-PA | 218 | GF18267-PA | 10..186 | 37..191 | 196 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13846-PA | 219 | GG13846-PA | 15..219 | 24..229 | 1034 | 95.1 | Plus |
Dere\GG12202-PA | 196 | GG12202-PA | 8..187 | 34..210 | 289 | 36.1 | Plus |
Dere\GG13845-PA | 555 | GG13845-PA | 355..550 | 17..223 | 265 | 28.7 | Plus |
Dere\GG22922-PA | 240 | GG22922-PA | 23..234 | 37..222 | 243 | 29 | Plus |
Dere\GG17252-PA | 216 | GG17252-PA | 10..191 | 37..196 | 165 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15260-PA | 222 | GH15260-PA | 17..221 | 23..227 | 826 | 80.5 | Plus |
Dgri\GH18143-PA | 197 | GH18143-PA | 8..187 | 34..210 | 274 | 35.5 | Plus |
Dgri\GH21708-PA | 238 | GH21708-PA | 23..238 | 37..225 | 249 | 30.3 | Plus |
Dgri\GH19429-PA | 217 | GH19429-PA | 10..126 | 37..156 | 198 | 35 | Plus |
Dgri\GH25120-PA | 972 | GH25120-PA | 687..834 | 33..188 | 168 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Adk1-PB | 229 | CG17146-PB | 1..229 | 1..229 | 1157 | 100 | Plus |
Adk1-PA | 201 | CG17146-PA | 2..201 | 30..229 | 1013 | 100 | Plus |
Dak1-PA | 253 | CG6092-PA | 65..244 | 34..210 | 288 | 36.6 | Plus |
Adk2-PA | 240 | CG3140-PA | 23..234 | 37..222 | 238 | 29 | Plus |
CG9541-PC | 616 | CG9541-PC | 328..491 | 33..204 | 165 | 28.4 | Plus |
CG9541-PD | 646 | CG9541-PD | 358..521 | 33..204 | 165 | 28.4 | Plus |
Adk3-PD | 216 | CG6612-PD | 10..190 | 37..195 | 154 | 23.4 | Plus |
Adk3-PC | 216 | CG6612-PC | 10..190 | 37..195 | 154 | 23.4 | Plus |
Adk3-PA | 216 | CG6612-PA | 10..190 | 37..195 | 154 | 23.4 | Plus |
Adk3-PB | 216 | CG6612-PB | 10..190 | 37..195 | 154 | 23.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11969-PA | 225 | GI11969-PA | 1..222 | 4..225 | 943 | 77.9 | Plus |
Dmoj\GI22905-PA | 197 | GI22905-PA | 2..187 | 28..210 | 305 | 36 | Plus |
Dmoj\GI20701-PA | 240 | GI20701-PA | 23..232 | 37..220 | 247 | 29.8 | Plus |
Dmoj\GI22633-PA | 217 | GI22633-PA | 10..206 | 37..210 | 203 | 26.5 | Plus |
Dmoj\GI12486-PA | 224 | GI12486-PA | 1..175 | 38..190 | 173 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25010-PA | 225 | GL25010-PA | 3..223 | 10..226 | 955 | 85.5 | Plus |
Dper\GL12997-PA | 193 | GL12997-PA | 5..189 | 29..210 | 302 | 35.6 | Plus |
Dper\GL22014-PA | 249 | GL22014-PA | 61..240 | 34..210 | 284 | 35.3 | Plus |
Dper\GL25009-PA | 539 | GL25009-PA | 370..531 | 30..221 | 250 | 28.1 | Plus |
Dper\GL11651-PA | 222 | GL11651-PA | 5..205 | 37..207 | 246 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14347-PA | 229 | GA14347-PA | 1..227 | 4..226 | 976 | 84.1 | Plus |
Dpse\GA23172-PA | 198 | GA23172-PA | 5..193 | 29..214 | 296 | 35.4 | Plus |
Dpse\GA19345-PA | 249 | GA19345-PA | 61..240 | 34..210 | 283 | 35.3 | Plus |
Dpse\GA16231-PA | 240 | GA16231-PA | 23..223 | 37..207 | 246 | 30.7 | Plus |
Dpse\GA19014-PA | 539 | GA19014-PA | 370..531 | 30..221 | 244 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24672-PA | 220 | GM24672-PA | 1..220 | 10..229 | 1146 | 98.6 | Plus |
Dsec\GM10200-PA | 253 | GM10200-PA | 65..244 | 34..210 | 300 | 36.1 | Plus |
Dsec\GM18289-PA | 240 | GM18289-PA | 23..234 | 37..222 | 239 | 28.6 | Plus |
Dsec\GM16084-PA | 240 | GM16084-PA | 23..234 | 37..222 | 239 | 28.6 | Plus |
Dsec\GM24671-PA | 507 | GM24671-PA | 345..458 | 3..120 | 228 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12741-PA | 206 | GD12741-PA | 1..188 | 10..197 | 979 | 98.4 | Plus |
Dsim\GD18150-PA | 253 | GD18150-PA | 65..244 | 34..210 | 299 | 36.1 | Plus |
Dsim\GD12739-PA | 188 | GD12739-PA | 2..183 | 29..223 | 242 | 27.7 | Plus |
Dsim\GD11825-PA | 240 | GD11825-PA | 23..234 | 37..222 | 239 | 28.6 | Plus |
Dsim\GD20690-PA | 209 | GD20690-PA | 10..184 | 37..196 | 153 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12193-PA | 225 | GJ12193-PA | 1..222 | 4..225 | 980 | 81.5 | Plus |
Dvir\GJ23317-PA | 197 | GJ23317-PA | 8..187 | 34..210 | 316 | 39.3 | Plus |
Dvir\GJ12192-PA | 561 | GJ12192-PA | 352..552 | 3..220 | 265 | 28.9 | Plus |
Dvir\GJ20444-PA | 240 | GJ20444-PA | 23..233 | 37..221 | 243 | 29.2 | Plus |
Dvir\GJ23879-PA | 217 | GJ23879-PA | 10..206 | 37..210 | 203 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13248-PA | 219 | GK13248-PA | 3..219 | 10..226 | 907 | 79.7 | Plus |
Dwil\GK12802-PA | 196 | GK12802-PA | 8..187 | 34..210 | 315 | 38.8 | Plus |
Dwil\GK21378-PA | 240 | GK21378-PA | 23..236 | 37..224 | 243 | 28.3 | Plus |
Dwil\GK13237-PA | 262 | GK13237-PA | 169..262 | 25..118 | 228 | 41.5 | Plus |
Dwil\GK13283-PA | 217 | GK13283-PA | 10..126 | 37..156 | 193 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20139-PA | 225 | GE20139-PA | 1..225 | 4..229 | 1071 | 95.6 | Plus |
Dyak\GE10646-PA | 196 | GE10646-PA | 8..187 | 34..210 | 296 | 36.1 | Plus |
Dyak\GE20138-PA | 524 | GE20138-PA | 324..519 | 17..223 | 256 | 27.3 | Plus |
Dyak\GE14359-PA | 240 | GE14359-PA | 23..234 | 37..222 | 237 | 28.6 | Plus |
Dyak\GE24653-PA | 216 | GE24653-PA | 10..193 | 37..198 | 178 | 25.1 | Plus |
Translation from 206 to 895
> RE68908.hyp MLFMCHQRVMKKEAEEKLKAEELRRARAAADIPIIWILGGPGCGKGTQCA KIVEKYGFTHLSSGDLLRNEVASGSDKGRQLQAVMASGGLVSNDEVLSLL NDAITRAKGSSKGFLIDGYPRQKNQGIEFEARIAPADLALYFECSEDTMV QRIMARAAASAVKRDDDNEKTIRARLLTFKQNTNAILELYEPKTLTINAE RDVDDIFLEVVQAIDCVLKKKQQNAAAQC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Adk1-PB | 229 | CG17146-PB | 1..229 | 1..229 | 1157 | 100 | Plus |
Adk1-PA | 201 | CG17146-PA | 2..201 | 30..229 | 1013 | 100 | Plus |
Dak1-PA | 253 | CG6092-PA | 65..244 | 34..210 | 288 | 36.6 | Plus |
Adk2-PA | 240 | CG3140-PA | 23..234 | 37..222 | 238 | 29 | Plus |
CG9541-PC | 616 | CG9541-PC | 328..491 | 33..204 | 165 | 28.4 | Plus |