BDGP Sequence Production Resources |
Search the DGRC for RE69232
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 692 |
Well: | 32 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG4623-RA |
Protein status: | RE69232.pep: gold |
Preliminary Size: | 984 |
Sequenced Size: | 1609 |
Gene | Date | Evidence |
---|---|---|
CG4623 | 2001-12-17 | Blastp of sequenced clone |
CG4623 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4623 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4623 | 2008-04-29 | Release 5.5 accounting |
CG4623 | 2008-08-15 | Release 5.9 accounting |
CG4623 | 2008-12-18 | 5.12 accounting |
1609 bp (1609 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071643
> RE69232.complete AAAAAGTTGGAGAATCGCTTGACATAATGGACTGTTTTCGGATCCGAAAC ATATATATGTACTATATATATGTACATACGAGCCGAAAGTGCAAATTAAT AGGGGATCGCAGCGATCCGTACGATCTGACTTCATTATAGACGCAGTCGT CGGCGGAATCAGCACGCAAGTGGAGTCTCCGGTTTTCCAAGTCAATCCGG CACGCGCTTACGGCTTTGTTAGTTAGCAACTTTTCGCAACCGTCGGCGGG GCATGTGATACGAAAAAAGGCGCCCATGCTAGTGAAACTAATCAGCAAAC TAAAGATACACTAAGCCAAAGAATATTAAGTGAAACACACATAGAACAAG ATGAGCGAGCAGACAAAGGAAATCGAAGCTCTGCCGCCCACCTTGCAGGA CTTCAAGGCTCCCGATCTGCCGGCCAATAAGCCAGTGCTCTTCTTCCATC CGTACAACTTCCATGCGCAAAAAGTTCTTATGGTCTTCTACGAGAAGAAG ATCGACTTCTTTCCCTATGTGGTGGACCTGTGCAATGGCGAGCAGTACTC CAATTGGTTCCTAAACCTCAATCCCAAGGGCGATGTGCCAGTGCTCCAGG ATGGCGCCCTCGTCATTCCCAGCTCGACGCACATCATCAACTATGTGGAG AGCAAATTTCGCGGTGATCGATCGCTGAAGCCAGCGCACAACTCCAAGGA ATTCGATCAAATGCTGATCTTCGAGCAGGCAATGGCCCGCCTTCCAGTGG GAACACTCAGCCTGGGCTCCTTCATACACGACGATCTGAAGCTGGTGCCC AAGGCGCCCTTCATCGGACCCGTGCGCCAGTCCTGCCTGAAAAACAATGA AAAGGTGCTGGATCTGCTGCGCCACTCGGTGGACGAACAGGCGACCAAAA AAGCAGCGCTGCAGCACAAGCTGGACATACAGTTGCGCCGCCACGAGCTG GCCTCGTCCCGCGAGGAATTCCAGAAGGTTCTGGATGCCGTGCGGCACTT TCTGCTCTATGTGGAGCAGGAGCTAACCGCCCAGGCGCCACGCGTTGAGT GGCTGACCGGCGACGAACTGAGCGTGGCGGATATCTCGCTGGGATTGCTG CTGCATCGACTGTATCAGCTGGGATTCGAGAATCAGTTCTGGACCTTCGG AAAGCTGCCGCAGGTGGAGGCATACTTCTTGCGCTTCCGGCAGCGCGAGT CCTTCCACCGCCTGCAGCCGAGCAACTTTGCCATACTGCGCGAAATGTGG ACCCGAACGCCGGGCAACTATAAGCTAGGAGCGGGCGCCGGCTTCCTGGG TATGGCCATGTTCGCCGCCTTCGCGCACAAGTGAGCGGAGCAGCGGGACA GCAGACTTTGTTAACAAATCCTTTTACTGTTAAAGTTGGGCACATATAAA CACACGAACATAAGAACGCTTAAAGCTACGCACTGCTGATGAAGGATGCT TGGGGTGTCATGGTAAGAATCCGGCGGTGGAGGAGGATGAGGAGAAGAGC GCGCGATCCAGTGCCAGCCTCGGCTGCTTGCTTAGTAATATCATCATCGT TTCATATCATCGTTGCTGAATATACAAAAATTTGGTATAAATTCCAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4623-RA | 1595 | CG4623-RA | 1..1595 | 1..1595 | 7975 | 100 | Plus |
CG4623.b | 1592 | CG4623.b | 1..1592 | 1..1595 | 7905 | 99.8 | Plus |
CG4623.a | 1509 | CG4623.a | 1..1299 | 1..1299 | 6495 | 100 | Plus |
CG4623.a | 1509 | CG4623.a | 1299..1509 | 1385..1595 | 1055 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 5136110..5136863 | 841..1595 | 3605 | 98.8 | Plus |
chr3L | 24539361 | chr3L | 5134512..5134978 | 1..476 | 2150 | 97.3 | Plus |
chr3L | 24539361 | chr3L | 5135621..5135813 | 474..666 | 965 | 100 | Plus |
chr3L | 24539361 | chr3L | 5135871..5136045 | 666..840 | 830 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 5143563..5144319 | 841..1597 | 3785 | 100 | Plus |
3L | 28110227 | 3L | 5141955..5142430 | 1..476 | 2380 | 100 | Plus |
3L | 28110227 | 3L | 5143073..5143265 | 474..666 | 965 | 100 | Plus |
3L | 28110227 | 3L | 5143323..5143497 | 666..840 | 875 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 5136663..5137419 | 841..1597 | 3785 | 100 | Plus |
3L | 28103327 | 3L | 5135055..5135530 | 1..476 | 2380 | 100 | Plus |
3L | 28103327 | 3L | 5136173..5136365 | 474..666 | 965 | 100 | Plus |
3L | 28103327 | 3L | 5136423..5136597 | 666..840 | 875 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 5135872..5136045 | 667..840 | 98 | -> | Plus |
chr3L | 5134512..5134975 | 1..473 | 97 | -> | Plus |
chr3L | 5135621..5135813 | 474..666 | 100 | -> | Plus |
chr3L | 5136110..5136863 | 841..1595 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4623-RA | 1..984 | 351..1334 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4623-RA | 1..984 | 351..1334 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4623-RA | 1..984 | 351..1334 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4623-RA | 1..984 | 351..1334 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4623-RA | 1..984 | 351..1334 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4623-RA | 1..1595 | 1..1595 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4623-RA | 1..1595 | 1..1595 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4623-RA | 3..1597 | 1..1595 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4623-RA | 1..1595 | 1..1595 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4623-RA | 3..1597 | 1..1595 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5141955..5142427 | 1..473 | 100 | -> | Plus |
3L | 5143073..5143265 | 474..666 | 100 | -> | Plus |
3L | 5143324..5143497 | 667..840 | 100 | -> | Plus |
3L | 5143563..5144317 | 841..1595 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5141955..5142427 | 1..473 | 100 | -> | Plus |
3L | 5143073..5143265 | 474..666 | 100 | -> | Plus |
3L | 5143324..5143497 | 667..840 | 100 | -> | Plus |
3L | 5143563..5144317 | 841..1595 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5141955..5142427 | 1..473 | 100 | -> | Plus |
3L | 5143073..5143265 | 474..666 | 100 | -> | Plus |
3L | 5143324..5143497 | 667..840 | 100 | -> | Plus |
3L | 5143563..5144317 | 841..1595 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 5136173..5136365 | 474..666 | 100 | -> | Plus |
arm_3L | 5135055..5135527 | 1..473 | 100 | -> | Plus |
arm_3L | 5136424..5136597 | 667..840 | 100 | -> | Plus |
arm_3L | 5136663..5137417 | 841..1595 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5136173..5136365 | 474..666 | 100 | -> | Plus |
3L | 5136424..5136597 | 667..840 | 100 | -> | Plus |
3L | 5135055..5135527 | 1..473 | 100 | -> | Plus |
3L | 5136663..5137417 | 841..1595 | 100 | Plus |
Translation from 350 to 1333
> RE69232.pep MSEQTKEIEALPPTLQDFKAPDLPANKPVLFFHPYNFHAQKVLMVFYEKK IDFFPYVVDLCNGEQYSNWFLNLNPKGDVPVLQDGALVIPSSTHIINYVE SKFRGDRSLKPAHNSKEFDQMLIFEQAMARLPVGTLSLGSFIHDDLKLVP KAPFIGPVRQSCLKNNEKVLDLLRHSVDEQATKKAALQHKLDIQLRRHEL ASSREEFQKVLDAVRHFLLYVEQELTAQAPRVEWLTGDELSVADISLGLL LHRLYQLGFENQFWTFGKLPQVEAYFLRFRQRESFHRLQPSNFAILREMW TRTPGNYKLGAGAGFLGMAMFAAFAHK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23970-PA | 328 | GF23970-PA | 1..328 | 1..327 | 1404 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15262-PA | 327 | GG15262-PA | 1..327 | 1..327 | 1668 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16180-PA | 331 | GH16180-PA | 1..331 | 1..327 | 1207 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gdap1-PA | 327 | CG4623-PA | 1..327 | 1..327 | 1713 | 100 | Plus |
Gdap1-PB | 326 | CG4623-PB | 1..326 | 1..327 | 1695 | 99.7 | Plus |
Gdap1-PC | 320 | CG4623-PC | 1..316 | 1..316 | 1656 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13331-PA | 333 | GI13331-PA | 1..333 | 1..327 | 1229 | 70 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22618-PA | 330 | GL22618-PA | 1..330 | 1..327 | 1364 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18310-PA | 330 | GA18310-PA | 1..330 | 1..327 | 1361 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14696-PA | 327 | GM14696-PA | 1..327 | 1..327 | 1725 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13879-PA | 327 | GD13879-PA | 1..327 | 1..327 | 1725 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13158-PA | 331 | GJ13158-PA | 1..331 | 1..327 | 1276 | 71.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20321-PA | 330 | GK20321-PA | 1..330 | 1..327 | 1365 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21484-PA | 327 | GE21484-PA | 1..327 | 1..327 | 1682 | 95.1 | Plus |
Translation from 350 to 1333
> RE69232.hyp MSEQTKEIEALPPTLQDFKAPDLPANKPVLFFHPYNFHAQKVLMVFYEKK IDFFPYVVDLCNGEQYSNWFLNLNPKGDVPVLQDGALVIPSSTHIINYVE SKFRGDRSLKPAHNSKEFDQMLIFEQAMARLPVGTLSLGSFIHDDLKLVP KAPFIGPVRQSCLKNNEKVLDLLRHSVDEQATKKAALQHKLDIQLRRHEL ASSREEFQKVLDAVRHFLLYVEQELTAQAPRVEWLTGDELSVADISLGLL LHRLYQLGFENQFWTFGKLPQVEAYFLRFRQRESFHRLQPSNFAILREMW TRTPGNYKLGAGAGFLGMAMFAAFAHK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4623-PA | 327 | CG4623-PA | 1..327 | 1..327 | 1713 | 100 | Plus |
CG4623-PB | 326 | CG4623-PB | 1..326 | 1..327 | 1695 | 99.7 | Plus |
CG4623-PC | 320 | CG4623-PC | 1..316 | 1..316 | 1656 | 100 | Plus |