BDGP Sequence Production Resources |
Search the DGRC for RE69454
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 694 |
Well: | 54 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG5757-RA |
Protein status: | RE69454.pep: gold |
Preliminary Size: | 810 |
Sequenced Size: | 884 |
Gene | Date | Evidence |
---|---|---|
CG5757 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5757 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5757 | 2003-07-07 | Blastp of sequenced clone |
CG5757 | 2008-04-29 | Release 5.5 accounting |
CG5757 | 2008-08-15 | Release 5.9 accounting |
CG5757 | 2008-12-18 | 5.12 accounting |
884 bp (884 high quality bases) assembled on 2003-07-07
GenBank Submission: AY070593
> RE69454.complete GGTCGTGTCGCAAACGCCGGTAAGTGCAACATTAAGATCGTAATGAGCGC GGGAAAACGTGGAGCGTTGATAATATTTGAAGGATGTGATCGAAGTGGAA AGACCACTCAAAGCAGGCTGTTGGTTGAACTCTTGAAATCGAAGGGCATT CCGACATTGCCCATGAATTTCCCGGAACGCAGTTCCAGCATTGGTCAGGT GATAAACTCCTATTTAACGAACAGCAAGGATCTTCCGGATGAGGTGATTC ACTTAATGTTCTCCGCCAACCGCTGGGAGCACATAAACCAGGTGAAGGAG AAGCTGCTTGAGGGCACCACATTGGTTGTGGATCGATATTCGTTCTCTGG CGTGGCATATAGCGCAGCCAAAGGATTAGACTTTGATTGGTGCTATGCTC CGGAAAGGGGGCTCATAAAACCAGATGCTGTATTTTACCTAAGAGCACCA CCAAACGACCTTACACATCGAGGACAATACGGCAAAGAGCGTTATGAGAA AGTAGAATTCCAAGGTCGTGTGGCCGAAGTATTCAACCGCATTTGCTCCA AGGAGGGCAGCTATTTTCACCAGTTCGATGCCAGACAGTCTGTAGAGGAT TTACATGCCCAGATAGCGAGCATTACGGAGGAACTCCTGCCCAAAGTGGC CACCCGACCTCTGGACACGTTATCGTAGCACACGTCCTCGCGTCGCCATT CATTAGAGGGGATTTACATTGATTTATGCAATACACGAATGTTTGTTATA AATGTTTTAAATGCCGCTTAACTTTTAATTTACGATAAAGCCGCAGGCAA TAAATCCTAGCATCGGGCGATTGGAAGGATATCGTTAGGTGTTGAGCGAA ATGCATTTACAGAATTGCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13980817..13981194 | 868..491 | 1890 | 100 | Minus |
chr2R | 21145070 | chr2R | 13981259..13981626 | 491..124 | 1825 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 13981678..13981801 | 124..1 | 605 | 99.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18093722..18094100 | 869..491 | 1895 | 100 | Minus |
2R | 25286936 | 2R | 18094165..18094532 | 491..124 | 1840 | 100 | Minus |
2R | 25286936 | 2R | 18094584..18094707 | 124..1 | 605 | 99.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 18094921..18095299 | 869..491 | 1895 | 100 | Minus |
2R | 25260384 | 2R | 18095364..18095731 | 491..124 | 1840 | 100 | Minus |
2R | 25260384 | 2R | 18095783..18095906 | 124..1 | 605 | 99.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13980817..13981193 | 492..868 | 100 | <- | Minus |
chr2R | 13981259..13981625 | 125..491 | 99 | <- | Minus |
chr2R | 13981678..13981801 | 1..124 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5757-RA | 1..636 | 43..678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5757-RA | 1..636 | 43..678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5757-RA | 1..636 | 43..678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5757-RA | 1..636 | 43..678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5757-RA | 1..636 | 43..678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5757-RA | 1..863 | 1..863 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5757-RA | 1..863 | 1..863 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5757-RA | 30..897 | 1..868 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5757-RA | 1..863 | 1..863 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5757-RA | 30..897 | 1..868 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18093723..18094099 | 492..868 | 100 | <- | Minus |
2R | 18094165..18094531 | 125..491 | 100 | <- | Minus |
2R | 18094584..18094707 | 1..124 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18093723..18094099 | 492..868 | 100 | <- | Minus |
2R | 18094165..18094531 | 125..491 | 100 | <- | Minus |
2R | 18094584..18094707 | 1..124 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18093723..18094099 | 492..868 | 100 | <- | Minus |
2R | 18094165..18094531 | 125..491 | 100 | <- | Minus |
2R | 18094584..18094707 | 1..124 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13982089..13982212 | 1..124 | 99 | Minus | |
arm_2R | 13981228..13981604 | 492..868 | 100 | <- | Minus |
arm_2R | 13981670..13982036 | 125..491 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18094922..18095298 | 492..868 | 100 | <- | Minus |
2R | 18095364..18095730 | 125..491 | 100 | <- | Minus |
2R | 18095783..18095906 | 1..124 | 99 | Minus |
Translation from 0 to 677
> RE69454.hyp GHVANAGKCNIKIVMSAGKRGALIIFEGCDRSGKTTQSRLLVELLKSKGI PTLPMNFPERSSSIGQVINSYLTNSKDLPDEVIHLMFSANRWEHINQVKE KLLEGTTLVVDRYSFSGVAYSAAKGLDFDWCYAPERGLIKPDAVFYLRAP PNDLTHRGQYGKERYEKVEFQGRVAEVFNRICSKEGSYFHQFDARQSVED LHAQIASITEELLPKVATRPLDTLS*
Translation from 42 to 677
> RE69454.pep MSAGKRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSI GQVINSYLTNSKDLPDEVIHLMFSANRWEHINQVKEKLLEGTTLVVDRYS FSGVAYSAAKGLDFDWCYAPERGLIKPDAVFYLRAPPNDLTHRGQYGKER YEKVEFQGRVAEVFNRICSKEGSYFHQFDARQSVEDLHAQIASITEELLP KVATRPLDTLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13205-PA | 211 | GF13205-PA | 1..211 | 1..211 | 818 | 70.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20995-PA | 211 | GG20995-PA | 1..211 | 1..211 | 978 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20447-PA | 211 | GH20447-PA | 1..210 | 1..210 | 709 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5757-PB | 211 | CG5757-PB | 1..211 | 1..211 | 1095 | 100 | Plus |
CG5757-PA | 211 | CG5757-PA | 1..211 | 1..211 | 1095 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19275-PA | 211 | GI19275-PA | 1..211 | 1..211 | 677 | 55.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10538-PA | 211 | GL10538-PA | 1..211 | 1..211 | 871 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19108-PA | 211 | GA19108-PA | 1..211 | 1..211 | 863 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19929-PA | 182 | GM19929-PA | 1..182 | 1..211 | 862 | 78.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25418-PA | 211 | GD25418-PA | 1..211 | 1..211 | 1082 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22153-PA | 211 | GJ22153-PA | 1..211 | 1..211 | 741 | 60.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22056-PA | 209 | GK22056-PA | 2..209 | 5..211 | 786 | 67.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13938-PA | 211 | GE13938-PA | 1..211 | 1..211 | 1021 | 88.6 | Plus |