BDGP Sequence Production Resources |
Search the DGRC for RE69682
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 696 |
Well: | 82 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG13001-RA |
Protein status: | RE69682.pep: gold |
Preliminary Size: | 1008 |
Sequenced Size: | 1793 |
Gene | Date | Evidence |
---|---|---|
CG13001 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13001 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13001 | 2004-07-15 | Blastp of sequenced clone |
CG13001 | 2008-04-29 | Release 5.5 accounting |
CG13001 | 2008-08-15 | Release 5.9 accounting |
CG13001 | 2008-12-18 | 5.12 accounting |
1793 bp (1793 high quality bases) assembled on 2004-07-15
GenBank Submission: BT015199
> RE69682.complete GTTGTATACCAGAAAAAAATGGTATTAGCATTAGCAGAGAAAAAATCAAA TAAATAAAGAAAAAATCAATTAAAAGTGCGCCATTCCAAAGGATTATCCC AAAAGACGCGATCATCCATATCAGATGCTTAAGAATCGGCCGGAAAATCC GACATCGAACTATTAGGCTAGTGAAAAAGTGCAAAATAAACATTCGCCCA GTGGAGGGGGCCATACAGAAAACACTCGAGAGTCTTTCGAAAATACACAT ATTATACCACACGGATCGTTTTGGATCTACAATGGCCACCAGCGAGATCT CGAGCTCCAATGAGCGGCACTACTACGCCAAACTGGAGGCCATCAAGGAC ATCAGGGACAAGACGCTGTCGCTGGAGAAGCTCAAAGTGCGGATCATCAA GGAGGTGAAGCTGAGCGACGACGAGGAGAAGTGCCTGGAGGAGTACCGCA AGGAGATGGAGCACCTGCTCGAGGAGAAGATGTCGCACGTGGAAGAGCTG CGCCAGATCCACGCGGACATCAACGACATGGAGAACATCATCAAGCAGAC GAAGGAGAACCAGACCCGCTCCTTCGACATGGCCAACCGGGTGTACGAGG AGTACCTGGCCCTGAAGTACCAGATTGATCACATGCGCCGCGACTATCTC GGACTAAGCCCGCTGCGAGATCTGCACGAGGAGGAGGGCAGTCCCATTTC GAAGGATCGCTTCCAGACCAACTTCCTTAAGGTGGCCGCCCAGTCGGCGG CAGCAGCAGCTGCTGCAGCTGCGGCGGCGGCCTCGGTTAATCAGAACTCG TCGTTGGCCCGTCCGCATGCCCGGCATCCTCTGATGCCGGAGGCCACGGT CACCGCGCTGCCTTCTGGCGGCGGACAGGGCGGCGTTGGTGGTGGCGGCG CTGCAGGCGGTGGCGGAGGATCTGTGGGCGGCGGAGGCGGTGGTGGCGGC AATCCTGGACACGCCTTCATGCCACCCGCACCGCCGGGAGCAGGCAGTGC TGCTGCCGCCGCCGCTGCTGCTGCAGTGCGTCTGGGCAAGGGTGACTTCT CAGCACCACCGCCACCGCCGCCGCCCAGCAATCGACTGCAGCAATCGCCT TCGATCGGCATCGGCCACCATCCCTCGTTCCGCTCCGACTTCAATGTGAA TCTCCGCCAGCAGCCGCCGCCCATGAAGTCCTGTCTGTCCTGCCACCAGC AGATCCACCGGAACGCGCCCATCTGTCCGCTCTGCAAGGCCAAGTCGCGC TCCCGCAATCCGAAGAAGCCCAAGAAGAAGAACAACTAAGTGGCCACCGC TCCAGACCAGCAACTACACTCATCTTAAGTCCGGAGCTGGTTCCGGAAAC TCAGCGCACTAAATCGAATGCGTTTTTTTTTTTTTTGCCTCATCTATTTA TTATTAATCCCAATGAAAAGTATTACAACGACGCAAGGCGGGTGTGCTCA TGATTATCGGAGAAGATTTAAAAGAATGTCAAATACTTGCATTAATATTT TATACATTACTAGTGTATTTGAAAATCGATGAAGAAATTATTCATGACAC GCCGGCCGCTAACAAATTCTCATAACAATTTTAGTTGGTAAACTCAATGA ATTTGATTTTTATTTTAACTATAATCATAGGCTAAGTATTTTTTAAAAGC TCAAATAACGTGTCAAATTATCGAGAACAAAAATTTTGTTTATACATGTA AGCCATGCTAAATATGCAACTATGTTATATTTAAGCAGCAAAAAAAAAAC ACAAATATCAATAAAAATATTTCATTTTTAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13001-RA | 1783 | CG13001-RA | 1..1780 | 2..1782 | 8865 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16830669..16832443 | 1779..2 | 8780 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 16941083..16942862 | 1782..2 | 8855 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 16949181..16950960 | 1782..2 | 8865 | 99.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16830669..16831494 | 951..1779 | 96 | == | Minus |
chrX | 16831579..16832443 | 1..866 | 95 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13001-RA | 1..1008 | 282..1289 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13001-RA | 1..1008 | 282..1289 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13001-RA | 1..1008 | 282..1289 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13001-RA | 1..1008 | 282..1289 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13001-RA | 1..1008 | 282..1289 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13001-RA | 1..1777 | 2..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13001-RA | 1..1777 | 2..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13001-RA | 1..1777 | 2..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13001-RA | 1..1777 | 2..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13001-RA | 9..1786 | 1..1779 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16941086..16942862 | 1..1779 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16941086..16942862 | 1..1779 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16941086..16942862 | 1..1779 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16835119..16836895 | 1..1779 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16949184..16950960 | 1..1779 | 99 | Minus |
Translation from 281 to 1288
> RE69682.hyp MATSEISSSNERHYYAKLEAIKDIRDKTLSLEKLKVRIIKEVKLSDDEEK CLEEYRKEMEHLLEEKMSHVEELRQIHADINDMENIIKQTKENQTRSFDM ANRVYEEYLALKYQIDHMRRDYLGLSPLRDLHEEEGSPISKDRFQTNFLK VAAQSAAAAAAAAAAAASVNQNSSLARPHARHPLMPEATVTALPSGGGQG GVGGGGAAGGGGGSVGGGGGGGGNPGHAFMPPAPPGAGSAAAAAAAAAVR LGKGDFSAPPPPPPPSNRLQQSPSIGIGHHPSFRSDFNVNLRQQPPPMKS CLSCHQQIHRNAPICPLCKAKSRSRNPKKPKKKNN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13001-PA | 335 | CG13001-PA | 1..335 | 1..335 | 1750 | 100 | Plus |
Translation from 281 to 1288
> RE69682.pep MATSEISSSNERHYYAKLEAIKDIRDKTLSLEKLKVRIIKEVKLSDDEEK CLEEYRKEMEHLLEEKMSHVEELRQIHADINDMENIIKQTKENQTRSFDM ANRVYEEYLALKYQIDHMRRDYLGLSPLRDLHEEEGSPISKDRFQTNFLK VAAQSAAAAAAAAAAAASVNQNSSLARPHARHPLMPEATVTALPSGGGQG GVGGGGAAGGGGGSVGGGGGGGGNPGHAFMPPAPPGAGSAAAAAAAAAVR LGKGDFSAPPPPPPPSNRLQQSPSIGIGHHPSFRSDFNVNLRQQPPPMKS CLSCHQQIHRNAPICPLCKAKSRSRNPKKPKKKNN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21819-PA | 329 | GF21819-PA | 1..319 | 1..325 | 1239 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18214-PA | 337 | GG18214-PA | 1..337 | 1..335 | 1746 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24201-PA | 346 | GH24201-PA | 1..336 | 1..325 | 1243 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13001-PA | 335 | CG13001-PA | 1..335 | 1..335 | 1750 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15222-PA | 328 | GI15222-PA | 1..318 | 1..325 | 1216 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22723-PA | 183 | GL22723-PA | 1..126 | 1..125 | 516 | 82.5 | Plus |
Dper\GL22734-PA | 136 | GL22734-PA | 50..126 | 249..325 | 362 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11967-PA | 326 | GA11967-PA | 1..316 | 1..325 | 1246 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13352-PA | 335 | GM13352-PA | 1..335 | 1..335 | 1771 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19320-PA | 328 | GJ19320-PA | 1..318 | 1..325 | 1265 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18524-PA | 353 | GK18524-PA | 1..343 | 1..325 | 1225 | 83.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15631-PA | 334 | GE15631-PA | 1..334 | 1..335 | 1677 | 96.1 | Plus |