BDGP Sequence Production Resources |
Search the DGRC for RE70209
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 702 |
Well: | 9 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG33932-RA |
Protein status: | RE70209.pep: gold |
Preliminary Size: | 2079 |
Sequenced Size: | 1257 |
Gene | Date | Evidence |
---|---|---|
CG12533 | 2002-01-01 | Sim4 clustering to Release 2 |
CG32530 | 2002-01-03 | Blastp of sequenced clone |
CG32530 | 2003-01-01 | Sim4 clustering to Release 3 |
Rpp20 | 2008-04-29 | Release 5.5 accounting |
Rpp20 | 2008-08-15 | Release 5.9 accounting |
CG33932 | 2008-08-15 | Release 5.9 accounting |
CG33932 | 2008-12-18 | 5.12 accounting |
Rpp20 | 2008-12-18 | 5.12 accounting |
1257 bp (1257 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075522
> RE70209.complete AGTGTTGGCCAGCGTGCGATTCGGAATGGAGTCGCGAGTCCGAAACTGCG ACACGCGCAGGTAAATGGAAAACACAAGTCGCCTCCTCCGCCGCTGATGA TGGGAAGCAATTATCCCGAGCACGGGACCAAGCCGAGATCCGCCAAATAC CACAAACAACAGAACCACCGAGTGGTGCGCAAGCAGCCGCCGCGTCCCGC TGTTAGCGACCGCCACAACATCTACATCACCAGCAAGACAGACTTTAAGG CCCAGCAGCGCCGCTGCGAGGAGCTGATTAACTCCGGCGCCCACGAGATC TTTCTGCATTGCATGGGCTTCTCCGTAACCCGCGGCCTCAATATCGCCCT ACGCCTCGTCCAGAATTCTGACGGCCCCTTAGCTACGCCATCAACACCTC CACCGTTCAGCTGGTGGACGAACTGCACCCGCTGTGCGATGCCGAGGACA TAACCTTCCGCCAGCGCAACAACTCGGCCCTGCACATCAAGATCCTCAAT AACAGTCTCTTCGACATCGCCGTGCCGCAACCGTCGCAGTCCCAGACGCA AGCCCAGTCCCTGGGCCAGTTCCGAGGCAAGGCGAAGGCCAGGCAGTAGC ATGTTCAAACTCTCGGAGCTGGTGCGCTGGCTGGGGCTCACCGAGTTCGA GATTCTGGTCAATCTGTGCGGCCTGCTGGTGTTCACCATCACGCTGACCG TCAAGCTCCATCTGCAGGCCAGGGCCGGACCCGGTGGCATACTCCCGGAG CCCATGGGCGACTGGTTCACCGTCTTCAGCCCCCTGTTCTTCATCGACAT CTGCAACGCGTACTTTTGCGTCATTGTGGGCATCCGCATGTACCTGGACT CTAACAACAAGCGCAAAGCCCTGCATCGCTTCATGTGGAGCACGTATTTC CTGGTGCTCATCGCCATCTTCAAGTACCTGCTCTGCCTGAAGCTATCCAG CAAGACGGGCCTCGAGTATTCGGAGGTCTTCTCGCCGATCTTCGTTCTGT TGCAGCTCGTGGCTGTGCGCGCCTGCCAGTTGCCCAACTCCATCTAAACC ATAGACGTAGTATAGCCCTAGTTCCGTATTATACATATATGTAACTATTC TGAAAGCCTTTAAATCATTGGATTGGTAGTTATCTGTATACGCAATGTGG TACAATAATTTTTAAGCGGTACGAAATTTATCTTTCTGGATATAGCATAT CTAATATATACGAATTATATCTGATCTGATTCGGTATGAAAGAAAAAAAA AAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19633144..19633396 | 1..255 | 98 | -> | Plus |
chrX | 19633472..19634458 | 256..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpp20-RA | 1..504 | 97..599 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpp20-RA | 1..504 | 97..599 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpp20-RA | 1..504 | 97..599 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpp20-RA | 1..504 | 97..599 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpp20-RA | 1..504 | 97..599 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpp20-RA | 1..1242 | 1..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33932-RA | 1..1242 | 1..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpp20-RA | 3..1244 | 1..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpp20-RA | 1..1242 | 1..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33932-RB | 3..1244 | 1..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19744433..19744685 | 1..255 | 98 | -> | Plus |
X | 19744761..19745747 | 256..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19744433..19744685 | 1..255 | 98 | -> | Plus |
X | 19744761..19745747 | 256..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19744433..19744685 | 1..255 | 98 | -> | Plus |
X | 19744761..19745747 | 256..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19638466..19638718 | 1..255 | 98 | -> | Plus |
arm_X | 19638794..19639780 | 256..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19752531..19752783 | 1..255 | 98 | -> | Plus |
X | 19752859..19753845 | 256..1242 | 99 | Plus |
Translation from 600 to 1046
> RE70209.pep MFKLSELVRWLGLTEFEILVNLCGLLVFTITLTVKLHLQARAGPGGILPE PMGDWFTVFSPLFFIDICNAYFCVIVGIRMYLDSNNKRKALHRFMWSTYF LVLIAIFKYLLCLKLSSKTGLEYSEVFSPIFVLLQLVAVRACQLPNSI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20216-PA | 146 | GF20216-PA | 1..146 | 1..148 | 686 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19254-PA | 148 | GG19254-PA | 1..148 | 1..148 | 765 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17694-PA | 144 | GH17694-PA | 1..144 | 1..148 | 632 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33932-PB | 148 | CG33932-PB | 1..148 | 1..148 | 770 | 100 | Plus |
CG33932-PA | 148 | CG33932-PA | 1..148 | 1..148 | 770 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16101-PA | 144 | GI16101-PA | 1..144 | 1..148 | 644 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15017-PA | 145 | GL15017-PA | 1..145 | 1..148 | 630 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22562-PA | 145 | GA22562-PA | 1..145 | 1..148 | 630 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22991-PA | 148 | GM22991-PA | 1..148 | 1..148 | 766 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17464-PA | 148 | GD17464-PA | 1..148 | 1..148 | 766 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15751-PA | 144 | GJ15751-PA | 1..144 | 1..148 | 644 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19245-PA | 144 | GK19245-PA | 1..144 | 1..148 | 653 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15873-PA | 148 | GE15873-PA | 1..148 | 1..148 | 766 | 99.3 | Plus |
Translation from 600 to 1046
> RE70209.hyp MFKLSELVRWLGLTEFEILVNLCGLLVFTITLTVKLHLQARAGPGGILPE PMGDWFTVFSPLFFIDICNAYFCVIVGIRMYLDSNNKRKALHRFMWSTYF LVLIAIFKYLLCLKLSSKTGLEYSEVFSPIFVLLQLVAVRACQLPNSI*