BDGP Sequence Production Resources |
Search the DGRC for RE70243
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 702 |
Well: | 43 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG8353-RA |
Protein status: | RE70243.pep: gold |
Preliminary Size: | 513 |
Sequenced Size: | 767 |
Gene | Date | Evidence |
---|---|---|
CG8353 | 2001-12-13 | Blastp of sequenced clone |
CG8353 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8353 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8353 | 2008-04-29 | Release 5.5 accounting |
CG8353 | 2008-08-15 | Release 5.9 accounting |
CG8353 | 2008-12-18 | 5.12 accounting |
767 bp (767 high quality bases) assembled on 2001-12-13
GenBank Submission: AY070601
> RE70243.complete GTCCATTTGCCATCGGACGTTCAAAGGAGAAACACACGCACTCAACTTGC TAAAAATAATTCAAAATTTAAGAAAATAGGCGTGCCTCTATTGACCAAAA GAATTGAACTATAATGACACATCTGACAAAAAATTTCGCACGTCCAGAAA AGAATGAGGAGGTTGTGACCTTCGGCAGTCTGGATCCGTCGGTTCAAGAA CTTCTGACAGCTGCTTTTCAAGTGCGCCAGCGGGCATACGTTCCATATAG TGGCTTCAAAGTTGGGGCTGCTTTTCGGGCCAAGGTCGATGGAAAGATCT TCACTGGCTGCAATGTGGAAAACGCCGCCTTTACGCCGGGCTCTTGTGCC GAGAGAACGGCCATTGCTAAGGCCGTAAGCGAAGGAGCCACCGAATTTTT GGCAGGTGCTGTTTTGGCCTACGAACCTAATGTATTCACCACTCCTTGCG GCGTTTGTCGTCAGTTTATACGCGAGTTTGCCAACGCGGATATACCCATA TATGTGGCCCAGGCGATCGATGCGAGGATTGCTGAAAAGCAGGAACTTTT GCAGAGTGACGATCCCGTCATGTGCACCTCAATCTTTAATCTGTTGCCGA GCAGTTTTCACACCTATCGAAAGTAACGACCACTGCAGGCAAGAACCGAA AATAGGCAGAAGGTAGCTAGGTAAAGGTTGTTTCTCAACCCCTTGCTGCC TCTAATCAATATAATTTTGATCTAATCACTTGCAATAAAGAAAATTACAC TAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8353-RA | 909 | CG8353-RA | 85..836 | 1..752 | 3760 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 1977..2131 | 2..160 | 111 | 57.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8213285..8213467 | 1..183 | 100 | -> | Plus |
chr2L | 8213652..8214219 | 184..751 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8353-RA | 1..513 | 114..626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8353-RA | 1..513 | 114..626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8353-RA | 1..513 | 114..626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8353-RA | 1..513 | 114..626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8353-RA | 1..513 | 114..626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8353-RA | 1..751 | 1..751 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8353-RA | 1..751 | 1..751 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8353-RA | 1..751 | 1..751 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8353-RA | 1..751 | 1..751 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8353-RA | 1..751 | 1..751 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8214305..8214487 | 1..183 | 100 | -> | Plus |
2L | 8214672..8215239 | 184..751 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8214305..8214487 | 1..183 | 100 | -> | Plus |
2L | 8214672..8215239 | 184..751 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8214305..8214487 | 1..183 | 100 | -> | Plus |
2L | 8214672..8215239 | 184..751 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8214305..8214487 | 1..183 | 100 | -> | Plus |
arm_2L | 8214672..8215239 | 184..751 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8214672..8215239 | 184..751 | 100 | Plus | |
2L | 8214305..8214487 | 1..183 | 100 | -> | Plus |
Translation from 113 to 625
> RE70243.pep MTHLTKNFARPEKNEEVVTFGSLDPSVQELLTAAFQVRQRAYVPYSGFKV GAAFRAKVDGKIFTGCNVENAAFTPGSCAERTAIAKAVSEGATEFLAGAV LAYEPNVFTTPCGVCRQFIREFANADIPIYVAQAIDARIAEKQELLQSDD PVMCTSIFNLLPSSFHTYRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15274-PA | 170 | GF15274-PA | 1..170 | 1..170 | 724 | 79.4 | Plus |
Dana\GF15275-PA | 264 | GF15275-PA | 100..263 | 5..168 | 447 | 55.8 | Plus |
Dana\GF15273-PA | 158 | GF15273-PA | 1..152 | 1..165 | 382 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10526-PA | 170 | GG10526-PA | 1..170 | 1..170 | 823 | 90.6 | Plus |
Dere\GG10527-PA | 264 | GG10527-PA | 100..263 | 5..168 | 452 | 53.9 | Plus |
Dere\GG10525-PA | 158 | GG10525-PA | 1..153 | 1..166 | 383 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11514-PA | 168 | GH11514-PA | 1..168 | 1..168 | 556 | 65.3 | Plus |
Dgri\GH11515-PA | 221 | GH11515-PA | 70..221 | 14..168 | 427 | 55.5 | Plus |
Dgri\GH11513-PA | 159 | GH11513-PA | 1..153 | 1..165 | 353 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8353-PB | 170 | CG8353-PB | 1..170 | 1..170 | 875 | 100 | Plus |
CG8353-PA | 170 | CG8353-PA | 1..170 | 1..170 | 875 | 100 | Plus |
CG8349-PA | 264 | CG8349-PA | 100..263 | 5..168 | 416 | 51.5 | Plus |
CG8360-PC | 158 | CG8360-PC | 1..152 | 1..165 | 379 | 49.4 | Plus |
CG8360-PA | 158 | CG8360-PA | 1..152 | 1..165 | 379 | 49.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17010-PA | 173 | GI17010-PA | 1..173 | 1..169 | 603 | 65.9 | Plus |
Dmoj\GI17011-PA | 220 | GI17011-PA | 71..218 | 15..165 | 435 | 57 | Plus |
Dmoj\GI17009-PA | 159 | GI17009-PA | 1..153 | 1..165 | 351 | 47.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18730-PA | 170 | GL18730-PA | 1..170 | 1..170 | 742 | 81.2 | Plus |
Dper\GL18731-PA | 227 | GL18731-PA | 63..226 | 5..168 | 426 | 52.1 | Plus |
Dper\GL18729-PA | 158 | GL18729-PA | 1..153 | 1..166 | 388 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21012-PA | 170 | GA21012-PA | 1..170 | 1..170 | 746 | 81.8 | Plus |
Dpse\GA21010-PA | 227 | GA21010-PA | 63..226 | 5..168 | 421 | 51.5 | Plus |
Dpse\GA21017-PA | 158 | GA21017-PA | 1..153 | 1..166 | 388 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16858-PA | 170 | GM16858-PA | 1..170 | 1..170 | 861 | 95.3 | Plus |
Dsec\GM16862-PA | 264 | GM16862-PA | 100..263 | 5..168 | 418 | 52.1 | Plus |
Dsec\GM16857-PA | 158 | GM16857-PA | 1..152 | 1..165 | 370 | 48.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23516-PA | 170 | GD23516-PA | 1..170 | 1..170 | 857 | 95.3 | Plus |
Dsim\GD23517-PA | 264 | GD23517-PA | 100..263 | 5..168 | 423 | 52.1 | Plus |
Dsim\GD23515-PA | 158 | GD23515-PA | 1..153 | 1..166 | 386 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24356-PA | 167 | GJ24356-PA | 1..167 | 1..168 | 607 | 68 | Plus |
Dvir\GJ24367-PA | 221 | GJ24367-PA | 70..221 | 14..168 | 447 | 57.4 | Plus |
Dvir\GJ24345-PA | 159 | GJ24345-PA | 1..154 | 1..166 | 377 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15159-PA | 170 | GK15159-PA | 1..170 | 1..170 | 670 | 74.1 | Plus |
Dwil\GK15160-PA | 216 | GK15160-PA | 53..213 | 7..169 | 443 | 53.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18746-PA | 170 | GE18746-PA | 1..170 | 1..170 | 818 | 90 | Plus |
Dyak\GE18747-PA | 264 | GE18747-PA | 100..263 | 5..168 | 444 | 53.3 | Plus |
Dyak\GE18745-PA | 158 | GE18745-PA | 1..153 | 1..166 | 387 | 49.7 | Plus |
Translation from 113 to 625
> RE70243.hyp MTHLTKNFARPEKNEEVVTFGSLDPSVQELLTAAFQVRQRAYVPYSGFKV GAAFRAKVDGKIFTGCNVENAAFTPGSCAERTAIAKAVSEGATEFLAGAV LAYEPNVFTTPCGVCRQFIREFANADIPIYVAQAIDARIAEKQELLQSDD PVMCTSIFNLLPSSFHTYRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8353-PB | 170 | CG8353-PB | 1..170 | 1..170 | 875 | 100 | Plus |
CG8353-PA | 170 | CG8353-PA | 1..170 | 1..170 | 875 | 100 | Plus |
CG8349-PA | 264 | CG8349-PA | 100..263 | 5..168 | 416 | 51.5 | Plus |
CG8360-PC | 158 | CG8360-PC | 1..152 | 1..165 | 379 | 49.4 | Plus |
CG8360-PA | 158 | CG8360-PA | 1..152 | 1..165 | 379 | 49.4 | Plus |