BDGP Sequence Production Resources |
Search the DGRC for RE70318
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 703 |
Well: | 18 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG1124-RA |
Protein status: | RE70318.pep: gold |
Preliminary Size: | 1123 |
Sequenced Size: | 1129 |
Gene | Date | Evidence |
---|---|---|
CG1124 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1124 | 2002-04-26 | Blastp of sequenced clone |
CG1124 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1124 | 2008-04-29 | Release 5.5 accounting |
CG1124 | 2008-08-15 | Release 5.9 accounting |
CG1124 | 2008-12-18 | 5.12 accounting |
1129 bp (1129 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113548
> RE70318.complete TGGCAGTTTAAGTTCTCAGCTTCGCATCGACGGACGTTCGAGCACTCCAC CCGCAGAAAGTTGATAGCTTCAGATTCCGACTTCGTTGCGTGCTGCTGCA GATTGAGATTCATATCCGGAAGTTGTTCTTGAGTGAAATGAATAAAGCGG TGTGCCTAGTAATCGTGATCCAAGCATTGCGGATGGTGCAGGCCGAGACC CCGCCCTATATTAAACAATGTCATAGGAACGACCCGAAATTGGTGGACTG CTTTATCGGAGCTATTGAACACCTAAAGCCATATTTGGCCAATGGCATTC CTGATATTCAGCTGCCCTCTGTGGAGCCCTTTAAGATGGACACCCTTGCC CTGCAGTTAACAGAGGGTCCCCAGGGGTATAAGATCACGCTGAAGAACAT GGAGGCCTTCGGGGCCAGCAACTTCAAGGTGACATCCCTGAAACTGAGCG AAGGAAGCGAGCCCTTCAAGGCGAAGATCGTGATGCCCAAGCTAAAGATT GAGGCTAAATACACGAGCTCCGGGGTCCTGCTGATCCTGCCCGCCTCCGG AGGTGGGGACTTCCATGCTAACTTCGAGGGTGTGAGTGCCGATCTCACAG GAAAGACATCCATTCACGCCTTCAAGGGCGCTAACTACCTCCACATCGAT GCTCTCAGCTTGGTTCTGGATGTGAAGGATGTGAAAATGAGCATCTCAGG TGCCTTCAACAACAATCGAATTCTGCTGGAGGCCACCAATCTGTTTCTGC GGGAAAACTCTCAAGTCGTTTTGGAGGCTATGCAGGCTCAATTGCAGAAA AAATTGGCTAGCGAGTTCGGCAAACTCGCCAACCAGCTCCTGAAGAATGT TCCTGTAGAGCAATTCTACGTGGACTAGGCCTTAATCCCTTAGATTGTAG TTCGTTAGTCTTATGTATATATATGTATTTAACTCTAAATTACACTCCAA TGCTATGAACCAAGTATTAAATTGTACATGTATATGGTGTAAACTCTGCG CATTTGTCTGGGTCAATAATGTCCTAGATTCCGATGATAATAAAACTCAT AAGTTTAATCATCAATTATTATTATTTGCATTGCGTAGAGTCGTATTCAC CCTGTGAAATCAATAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 793299..793716 | 309..726 | 2090 | 100 | Plus |
chr3R | 27901430 | chr3R | 793779..794166 | 727..1114 | 1940 | 100 | Plus |
chr3R | 27901430 | chr3R | 791130..791328 | 3..201 | 995 | 100 | Plus |
chr3R | 27901430 | chr3R | 792810..792919 | 202..311 | 550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 4967618..4968035 | 309..726 | 2090 | 100 | Plus |
3R | 32079331 | 3R | 4968098..4968491 | 727..1120 | 1970 | 100 | Plus |
3R | 32079331 | 3R | 4965449..4965647 | 3..201 | 995 | 100 | Plus |
3R | 32079331 | 3R | 4967129..4967238 | 202..311 | 550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 4708449..4708866 | 309..726 | 2090 | 100 | Plus |
3R | 31820162 | 3R | 4708929..4709322 | 727..1120 | 1970 | 100 | Plus |
3R | 31820162 | 3R | 4706280..4706478 | 3..201 | 995 | 100 | Plus |
3R | 31820162 | 3R | 4707960..4708069 | 202..311 | 550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
G3 | 4605 | G3 G3 4605bp | 4516..4583 | 912..978 | 112 | 66.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 791128..791328 | 1..201 | 99 | -> | Plus |
chr3R | 792810..792919 | 202..311 | 100 | -> | Plus |
chr3R | 793302..793716 | 312..726 | 100 | -> | Plus |
chr3R | 793779..794166 | 727..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1124-RA | 1..741 | 138..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1124-RA | 1..741 | 138..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1124-RA | 1..741 | 138..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1124-RA | 1..741 | 138..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1124-RA | 1..741 | 138..878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1124-RA | 1..1114 | 1..1114 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1124-RA | 1..1114 | 1..1114 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1124-RA | 3..1116 | 1..1114 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1124-RA | 1..1114 | 1..1114 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1124-RA | 3..1116 | 1..1114 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4965447..4965647 | 1..201 | 99 | -> | Plus |
3R | 4967129..4967238 | 202..311 | 100 | -> | Plus |
3R | 4967621..4968035 | 312..726 | 100 | -> | Plus |
3R | 4968098..4968485 | 727..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4965447..4965647 | 1..201 | 99 | -> | Plus |
3R | 4967129..4967238 | 202..311 | 100 | -> | Plus |
3R | 4967621..4968035 | 312..726 | 100 | -> | Plus |
3R | 4968098..4968485 | 727..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4965447..4965647 | 1..201 | 99 | -> | Plus |
3R | 4967129..4967238 | 202..311 | 100 | -> | Plus |
3R | 4967621..4968035 | 312..726 | 100 | -> | Plus |
3R | 4968098..4968485 | 727..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 791169..791369 | 1..201 | 99 | -> | Plus |
arm_3R | 792851..792960 | 202..311 | 100 | -> | Plus |
arm_3R | 793820..794207 | 727..1114 | 100 | Plus | |
arm_3R | 793343..793757 | 312..726 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4708452..4708866 | 312..726 | 100 | -> | Plus |
3R | 4708929..4709316 | 727..1114 | 100 | Plus | |
3R | 4706278..4706478 | 1..201 | 99 | -> | Plus |
3R | 4707960..4708069 | 202..311 | 100 | -> | Plus |
Translation from 137 to 877
> RE70318.pep MNKAVCLVIVIQALRMVQAETPPYIKQCHRNDPKLVDCFIGAIEHLKPYL ANGIPDIQLPSVEPFKMDTLALQLTEGPQGYKITLKNMEAFGASNFKVTS LKLSEGSEPFKAKIVMPKLKIEAKYTSSGVLLILPASGGGDFHANFEGVS ADLTGKTSIHAFKGANYLHIDALSLVLDVKDVKMSISGAFNNNRILLEAT NLFLRENSQVVLEAMQAQLQKKLASEFGKLANQLLKNVPVEQFYVD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18921-PA | 246 | GF18921-PA | 1..246 | 1..246 | 1185 | 90.7 | Plus |
Dana\GF16078-PA | 249 | GF16078-PA | 1..245 | 1..243 | 384 | 28.6 | Plus |
Dana\GF16079-PA | 246 | GF16079-PA | 24..244 | 22..244 | 313 | 28.7 | Plus |
Dana\GF11902-PA | 266 | GF11902-PA | 39..266 | 20..245 | 270 | 28.9 | Plus |
Dana\GF11323-PA | 261 | GF11323-PA | 31..235 | 19..223 | 263 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12598-PA | 246 | GG12598-PA | 1..246 | 1..246 | 1253 | 97.6 | Plus |
Dere\GG11255-PA | 249 | GG11255-PA | 21..245 | 20..243 | 381 | 30.7 | Plus |
Dere\GG11266-PA | 246 | GG11266-PA | 12..244 | 5..244 | 315 | 27.9 | Plus |
Dere\GG16974-PA | 269 | GG16974-PA | 42..269 | 20..245 | 270 | 28.5 | Plus |
Dere\GG20212-PA | 259 | GG20212-PA | 33..238 | 20..225 | 248 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17330-PA | 244 | GH17330-PA | 11..244 | 10..246 | 956 | 76.1 | Plus |
Dgri\GH15279-PA | 249 | GH15279-PA | 21..245 | 20..243 | 386 | 32 | Plus |
Dgri\GH15290-PA | 247 | GH15290-PA | 12..245 | 5..244 | 300 | 27.5 | Plus |
Dgri\GH18760-PA | 268 | GH18760-PA | 41..268 | 20..245 | 257 | 27.6 | Plus |
Dgri\GH18842-PA | 260 | GH18842-PA | 33..254 | 22..243 | 241 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1124-PA | 246 | CG1124-PA | 1..246 | 1..246 | 1243 | 100 | Plus |
CG2016-PD | 249 | CG2016-PD | 4..245 | 3..243 | 370 | 29.8 | Plus |
CG2016-PB | 249 | CG2016-PB | 4..245 | 3..243 | 370 | 29.8 | Plus |
CG2016-PE | 254 | CG2016-PE | 4..250 | 3..243 | 360 | 29.6 | Plus |
CG14661-PB | 246 | CG14661-PB | 12..244 | 5..244 | 318 | 28.3 | Plus |
CG14661-PA | 246 | CG14661-PA | 12..244 | 5..244 | 318 | 28.3 | Plus |
CG2016-PC | 183 | CG2016-PC | 2..179 | 67..243 | 284 | 30.3 | Plus |
CG10264-PA | 270 | CG10264-PA | 19..270 | 4..245 | 254 | 26.6 | Plus |
CG10407-PB | 259 | CG10407-PB | 33..236 | 20..223 | 252 | 27.2 | Plus |
CG10407-PA | 259 | CG10407-PA | 33..236 | 20..223 | 252 | 27.2 | Plus |
CG10407-PC | 263 | CG10407-PC | 33..240 | 20..223 | 238 | 26.7 | Plus |
CG14457-PB | 271 | CG14457-PB | 27..255 | 20..246 | 223 | 23.4 | Plus |
CG14457-PC | 270 | CG14457-PC | 28..254 | 22..246 | 218 | 23.1 | Plus |
CG11852-PA | 250 | CG11852-PA | 23..249 | 22..246 | 191 | 24 | Plus |
CG2650-PA | 260 | CG2650-PA | 30..257 | 22..244 | 185 | 23.8 | Plus |
CG17189-PC | 271 | CG17189-PC | 25..255 | 20..246 | 183 | 21.2 | Plus |
CG17189-PB | 271 | CG17189-PB | 25..255 | 20..246 | 183 | 21.2 | Plus |
CG14259-PA | 289 | CG14259-PA | 40..271 | 19..246 | 180 | 21.6 | Plus |
to-PB | 249 | CG11853-PB | 3..247 | 4..246 | 179 | 24.7 | Plus |
to-PA | 249 | CG11853-PA | 3..247 | 4..246 | 179 | 24.7 | Plus |
CG33680-PA | 278 | CG33680-PA | 15..227 | 6..244 | 164 | 21.5 | Plus |
CG5945-PB | 250 | CG5945-PB | 28..247 | 25..243 | 161 | 21 | Plus |
CG5945-PA | 250 | CG5945-PA | 28..247 | 25..243 | 161 | 21 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10251-PA | 244 | GI10251-PA | 1..244 | 1..246 | 971 | 75.8 | Plus |
Dmoj\GI22504-PA | 249 | GI22504-PA | 1..245 | 1..243 | 381 | 30.2 | Plus |
Dmoj\GI22505-PA | 247 | GI22505-PA | 24..245 | 22..244 | 307 | 28.3 | Plus |
Dmoj\GI22650-PA | 263 | GI22650-PA | 36..261 | 20..243 | 279 | 29.2 | Plus |
Dmoj\GI21174-PA | 307 | GI21174-PA | 5..223 | 25..244 | 233 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21627-PA | 246 | GL21627-PA | 1..246 | 1..246 | 1164 | 89 | Plus |
Dper\GL22211-PA | 249 | GL22211-PA | 21..245 | 20..243 | 382 | 30.7 | Plus |
Dper\GL22212-PA | 266 | GL22212-PA | 21..233 | 19..233 | 312 | 30.2 | Plus |
Dper\GL12216-PA | 269 | GL12216-PA | 42..269 | 20..245 | 273 | 28.9 | Plus |
Dper\GL17654-PA | 262 | GL17654-PA | 3..221 | 25..244 | 249 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10858-PA | 246 | GA10858-PA | 1..246 | 1..246 | 1164 | 89 | Plus |
Dpse\GA15186-PA | 249 | GA15186-PA | 21..245 | 20..243 | 382 | 30.7 | Plus |
Dpse\GA13156-PA | 246 | GA13156-PA | 21..244 | 19..244 | 322 | 29.2 | Plus |
Dpse\GA10203-PA | 269 | GA10203-PA | 42..269 | 20..245 | 274 | 28.9 | Plus |
Dpse\GA10301-PA | 265 | GA10301-PA | 34..239 | 18..223 | 209 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10785-PA | 246 | GM10785-PA | 1..246 | 1..246 | 1275 | 98.8 | Plus |
Dsec\GM10667-PA | 249 | GM10667-PA | 1..245 | 1..243 | 376 | 29 | Plus |
Dsec\GM10668-PA | 246 | GM10668-PA | 12..244 | 5..244 | 318 | 28.3 | Plus |
Dsec\GM24280-PA | 270 | GM24280-PA | 43..270 | 20..245 | 272 | 28.5 | Plus |
Dsec\GM25738-PA | 230 | GM25738-PA | 4..209 | 20..225 | 256 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19757-PA | 246 | GD19757-PA | 1..246 | 1..246 | 1275 | 98.8 | Plus |
Dsim\GD19644-PA | 246 | GD19644-PA | 12..244 | 5..244 | 318 | 28.3 | Plus |
Dsim\GD19070-PA | 270 | GD19070-PA | 43..270 | 20..245 | 271 | 28.5 | Plus |
Dsim\GD15043-PA | 271 | GD15043-PA | 14..255 | 4..246 | 220 | 23.5 | Plus |
Dsim\GD21189-PA | 250 | GD21189-PA | 23..249 | 22..246 | 188 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11056-PA | 244 | GJ11056-PA | 1..242 | 1..244 | 987 | 76.8 | Plus |
Dvir\GJ10107-PA | 249 | GJ10107-PA | 7..245 | 7..243 | 382 | 30.1 | Plus |
Dvir\GJ10108-PA | 247 | GJ10108-PA | 24..245 | 22..244 | 308 | 28.3 | Plus |
Dvir\GJ23379-PA | 264 | GJ23379-PA | 37..262 | 20..243 | 281 | 29.2 | Plus |
Dvir\GJ23840-PA | 260 | GJ23840-PA | 30..235 | 19..224 | 242 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13242-PA | 246 | GK13242-PA | 1..246 | 1..246 | 1107 | 84.1 | Plus |
Dwil\GK14050-PA | 251 | GK14050-PA | 23..247 | 20..243 | 374 | 30.7 | Plus |
Dwil\GK14051-PA | 224 | GK14051-PA | 2..222 | 22..244 | 271 | 26.5 | Plus |
Dwil\GK13256-PA | 268 | GK13256-PA | 41..268 | 20..245 | 262 | 28.1 | Plus |
Dwil\GK14019-PA | 258 | GK14019-PA | 28..233 | 19..224 | 222 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25446-PA | 246 | GE25446-PA | 1..246 | 1..246 | 1246 | 96.3 | Plus |
Dyak\GE25317-PA | 249 | GE25317-PA | 1..245 | 1..243 | 378 | 29 | Plus |
Dyak\GE25321-PA | 246 | GE25321-PA | 12..244 | 5..244 | 308 | 27.5 | Plus |
Dyak\GE25318-PA | 246 | GE25318-PA | 12..244 | 5..244 | 308 | 27.5 | Plus |
Dyak\GE24362-PA | 269 | GE24362-PA | 42..269 | 20..245 | 272 | 28.5 | Plus |
Translation from 137 to 877
> RE70318.hyp MNKAVCLVIVIQALRMVQAETPPYIKQCHRNDPKLVDCFIGAIEHLKPYL ANGIPDIQLPSVEPFKMDTLALQLTEGPQGYKITLKNMEAFGASNFKVTS LKLSEGSEPFKAKIVMPKLKIEAKYTSSGVLLILPASGGGDFHANFEGVS ADLTGKTSIHAFKGANYLHIDALSLVLDVKDVKMSISGAFNNNRILLEAT NLFLRENSQVVLEAMQAQLQKKLASEFGKLANQLLKNVPVEQFYVD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1124-PA | 246 | CG1124-PA | 1..246 | 1..246 | 1243 | 100 | Plus |
CG2016-PD | 249 | CG2016-PD | 4..245 | 3..243 | 370 | 29.8 | Plus |
CG2016-PB | 249 | CG2016-PB | 4..245 | 3..243 | 370 | 29.8 | Plus |
CG2016-PE | 254 | CG2016-PE | 4..250 | 3..243 | 360 | 29.6 | Plus |
CG14661-PB | 246 | CG14661-PB | 12..244 | 5..244 | 318 | 28.3 | Plus |