BDGP Sequence Production Resources |
Search the DGRC for RE70407
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 704 |
Well: | 7 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG8079-RB |
Protein status: | RE70407.pep: gold |
Sequenced Size: | 2177 |
Gene | Date | Evidence |
---|---|---|
CG8079-RB | 2010-11-11 | Gleaning Pick By Joe Carlson |
2177 bp assembled on 2011-01-03
GenBank Submission: BT125870.1
> RE70407.complete GATTTAGATTCGACGGTTGTTAAACAATGTCGTTACCGGCTGAAGAGGAG GATTTGGCGGACACTGTCGCCAAGTACGATTCCATCGAATTGAAGAGCAT ACAGGACCTGGAAACCTGCGAGCAGCAACAACTACTGCAGTACGTCGAAA AGCTGCACGGGATTATCCGCAAATACGACACCAAACTGGCGTCCTATAAA CAAAAACTCCTACACTACGTAAGCCGGGAAGAAAAGGTTTCGTGTGACAA AGCCAGCCAAGCAACTGAATCGGAATTACAAGAATGCCAGTATTCCATGG AAAACGATGAGGATACTAACAAAAAAGACCAGCCCAACGATTTATCGGCG ACGGACGCCTTCAGTTTTGTGGACGAAATGAGGCAGGCAGCCAAGCACGC CGAAAACCTGAACAACTTCGTTTACGAGCACACCTCTGGCATGTACTACG ATCCCAAGACGGGATACTACTATAACGCGGAGTACGGGCTGTACTACGAT GGTAACAACGGCTGCTACTACAGCTATGATCACGCCAAAGACTCGTACGA GTTCCACTCTCAGGCCCAGGCGAACGATGCGGCCAAACCGGAATCGGAGG ACGAGGATTTGGAGGTGCAGTTCGATGAGCTGGGAGGCGTCATTACGGAC CACGAAACGCTGAAGAAGATTAAGGCCGAGAAGCAAAAGGCCAAAGATCA AGCTGAAAAATCCAAGCGCAAAGCCAAGAAAAAGAAGAGTAAAAAGCACA GCAAGAAGAGATCCAAGAAGGAGCGCCGTCACAAGTCCAAGAAGCGTCAC AGGCATTCTGATGATGAGCGGTCTAATGATGCCGAGGAGGGCGAGCTGTC GCAAAGCAGCGACTCCAGTTCCGACTCTAGCAACGAGGATAGCAGCAGCA ACACGGAAGACAGCAGTGTTCCAGTTTTCAAGGCTGCCGGACGCTTTCAA GACATTGCTAAAAAGTATCCACCCTCCCTCCGCATCATTGTCCAGGAGAC TAACGTAGAGTCGCTGAAAGTGGGAAGCCTGCATCTAATCACATACAAAG GTGGATCTCTTGGACGGGAGGGCGCTCACGATGTTATCATTCCGGACGTG AACGTCAGCAAGTGCCACTTAAAGTTTAAGTATGAGAACAAGTTGGGAAT CTACCAATGTCTTGATCTGGGCTCCCGAAACGGTACCATTCTCAATGGAT CCCCAATGTCCAGCGACGCCATGGATCTCGTTCACGGCAGTGTTATCACT CTGGGCCAAACAAGACTACTGTGTCATGTCCACGAGGGTAACAGTACCTG CGGTTTGTGCGAGCCGGGCCTTTTGATAGAGAATTCTCCGCCGGTAGTGG CCGCTGTTGCCTCATCCACCGCATCCGTATTATCTCACAAGGAGCAGTTA AAAAAACTGCAGCGCAAATATGGACTAGAAAACGAAAAATTCGTTGATAC TAGCGGCAATGGGCAGTCCAACTACAATGATCGTGCCGCAACAAGGAGAG TCCAGGTGGGCAGCAGTACAGATAAAGAAAAGACTGAGGTGGCTTGTGTG AACACTGAAATCGGTAGCTCTAATAAGGGTTTTAAAATGCTGAGTAAATT GGGCTGGCAAAAGGGCGAAAAACTGGGCAAAACAAATGCCAGTGCTGGAC TTTTGGAGCCGATCAATGTGGTAGCCAATGAGGGCACTAGCGGTCTGGGA AACAGTGACCCAGTGCTGTCCAGCTCCAGAACCATTGACAAACGGAAGCT GGCCAACTTGAAGATCACTCAGGCGCGATATCAGCGCGCCAGTGATATGT TTGGACAATCGGATGATAGTGATTAGAAAGACATTTTGAATGATGTTGGA AACACATTTAATTAACAATTACTCAAACATATTTATAAGTGTATGTAAAT ATATATGTATGTATATACACATAGATTCTATGTATGTATATATTAATTCA AAAATCTTGCTATAAGGTTAAGCTATCAGTCAATTAATTAATTTAGCTTC GCTTATAAACAAAAAGAATAGGGGAAGGTAATGTTAAATAAATACGACTT CGCACACGTTGGTCTAAACTAATTGCGAGCCTAATGGGCATACAAACCGA TCGTTTAAATTAATTATCGTGTAGCCTAATGTTAATGTTAAATACAAAAG CCTCTTAAGATAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 11110593..11111093 | 1661..2161 | 2505 | 100 | Plus |
chr2R | 21145070 | chr2R | 11109705..11110192 | 950..1437 | 2440 | 100 | Plus |
chr2R | 21145070 | chr2R | 11109251..11109635 | 567..951 | 1925 | 100 | Plus |
chr2R | 21145070 | chr2R | 11105648..11105867 | 1..220 | 1100 | 100 | Plus |
chr2R | 21145070 | chr2R | 11108639..11108776 | 343..480 | 690 | 100 | Plus |
chr2R | 21145070 | chr2R | 11105923..11106046 | 219..342 | 620 | 100 | Plus |
chr2R | 21145070 | chr2R | 11110252..11110369 | 1438..1555 | 590 | 100 | Plus |
chr2R | 21145070 | chr2R | 11110431..11110536 | 1556..1661 | 530 | 100 | Plus |
chr2R | 21145070 | chr2R | 11108937..11109028 | 479..570 | 460 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 15223383..15223884 | 1661..2162 | 2510 | 100 | Plus |
2R | 25286936 | 2R | 15222495..15222982 | 950..1437 | 2440 | 100 | Plus |
2R | 25286936 | 2R | 15222041..15222425 | 567..951 | 1925 | 100 | Plus |
2R | 25286936 | 2R | 15218438..15218657 | 1..220 | 1100 | 100 | Plus |
2R | 25286936 | 2R | 15221429..15221566 | 343..480 | 690 | 100 | Plus |
2R | 25286936 | 2R | 15218713..15218836 | 219..342 | 620 | 100 | Plus |
2R | 25286936 | 2R | 15223042..15223159 | 1438..1555 | 590 | 100 | Plus |
2R | 25286936 | 2R | 15223221..15223326 | 1556..1661 | 530 | 100 | Plus |
2R | 25286936 | 2R | 15221727..15221818 | 479..570 | 460 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 15224582..15225083 | 1661..2162 | 2510 | 100 | Plus |
2R | 25260384 | 2R | 15223694..15224181 | 950..1437 | 2440 | 100 | Plus |
2R | 25260384 | 2R | 15223240..15223624 | 567..951 | 1925 | 100 | Plus |
2R | 25260384 | 2R | 15219637..15219856 | 1..220 | 1100 | 100 | Plus |
2R | 25260384 | 2R | 15222628..15222765 | 343..480 | 690 | 100 | Plus |
2R | 25260384 | 2R | 15219912..15220035 | 219..342 | 620 | 100 | Plus |
2R | 25260384 | 2R | 15224241..15224358 | 1438..1555 | 590 | 100 | Plus |
2R | 25260384 | 2R | 15224420..15224525 | 1556..1661 | 530 | 100 | Plus |
2R | 25260384 | 2R | 15222926..15223017 | 479..570 | 460 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NOF | 4347 | NOF FB 4347bp Derived from X51937 (g8297) (Rel. 44, Last updated, Version 6). | 3898..4026 | 2060..1935 | 145 | 60.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11110876..11111093 | 1944..2161 | 100 | Plus | |
chr2R | 11105648..11105865 | 1..218 | 100 | -> | Plus |
chr2R | 11105923..11106046 | 219..342 | 100 | -> | Plus |
chr2R | 11108639..11108775 | 343..479 | 100 | -> | Plus |
chr2R | 11108938..11109027 | 480..569 | 100 | -> | Plus |
chr2R | 11109254..11109635 | 570..951 | 100 | -> | Plus |
chr2R | 11109707..11110192 | 952..1437 | 100 | -> | Plus |
chr2R | 11110252..11110369 | 1438..1555 | 100 | -> | Plus |
chr2R | 11110431..11110536 | 1556..1661 | 100 | -> | Plus |
chr2R | 11110594..11110810 | 1662..1878 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RB | 1..1800 | 27..1826 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RB | 1..1800 | 27..1826 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RB | 1..1800 | 27..1826 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RB | 58..2159 | 1..2102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RB | 58..2218 | 1..2161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RB | 58..2218 | 1..2161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15222497..15222982 | 952..1437 | 100 | -> | Plus |
2R | 15218438..15218655 | 1..218 | 100 | -> | Plus |
2R | 15218713..15218836 | 219..342 | 100 | -> | Plus |
2R | 15221429..15221565 | 343..479 | 100 | -> | Plus |
2R | 15221728..15221817 | 480..569 | 100 | -> | Plus |
2R | 15222044..15222425 | 570..951 | 100 | -> | Plus |
2R | 15223042..15223159 | 1438..1555 | 100 | -> | Plus |
2R | 15223221..15223326 | 1556..1661 | 100 | -> | Plus |
2R | 15223384..15223883 | 1662..2161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15222497..15222982 | 952..1437 | 100 | -> | Plus |
2R | 15218438..15218655 | 1..218 | 100 | -> | Plus |
2R | 15218713..15218836 | 219..342 | 100 | -> | Plus |
2R | 15221429..15221565 | 343..479 | 100 | -> | Plus |
2R | 15221728..15221817 | 480..569 | 100 | -> | Plus |
2R | 15222044..15222425 | 570..951 | 100 | -> | Plus |
2R | 15223042..15223159 | 1438..1555 | 100 | -> | Plus |
2R | 15223221..15223326 | 1556..1661 | 100 | -> | Plus |
2R | 15223384..15223883 | 1662..2161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15222497..15222982 | 952..1437 | 100 | -> | Plus |
2R | 15218438..15218655 | 1..218 | 100 | -> | Plus |
2R | 15218713..15218836 | 219..342 | 100 | -> | Plus |
2R | 15221429..15221565 | 343..479 | 100 | -> | Plus |
2R | 15221728..15221817 | 480..569 | 100 | -> | Plus |
2R | 15222044..15222425 | 570..951 | 100 | -> | Plus |
2R | 15223042..15223159 | 1438..1555 | 100 | -> | Plus |
2R | 15223221..15223326 | 1556..1661 | 100 | -> | Plus |
2R | 15223384..15223883 | 1662..2161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11108934..11109070 | 343..479 | 100 | -> | Plus |
arm_2R | 11109233..11109322 | 480..569 | 100 | -> | Plus |
arm_2R | 11109549..11109930 | 570..951 | 100 | -> | Plus |
arm_2R | 11105943..11106160 | 1..218 | 100 | -> | Plus |
arm_2R | 11106218..11106341 | 219..342 | 100 | -> | Plus |
arm_2R | 11110002..11110487 | 952..1437 | 100 | -> | Plus |
arm_2R | 11110547..11110664 | 1438..1555 | 100 | -> | Plus |
arm_2R | 11110726..11110831 | 1556..1661 | 100 | -> | Plus |
arm_2R | 11110889..11111388 | 1662..2161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15219637..15219854 | 1..218 | 100 | -> | Plus |
2R | 15219912..15220035 | 219..342 | 100 | -> | Plus |
2R | 15222628..15222764 | 343..479 | 100 | -> | Plus |
2R | 15222927..15223016 | 480..569 | 100 | -> | Plus |
2R | 15223243..15223624 | 570..951 | 100 | -> | Plus |
2R | 15223696..15224181 | 952..1437 | 100 | -> | Plus |
2R | 15224241..15224358 | 1438..1555 | 100 | -> | Plus |
2R | 15224420..15224525 | 1556..1661 | 100 | -> | Plus |
2R | 15224583..15225082 | 1662..2161 | 100 | Plus |
Translation from 26 to 1825
> RE70407.pep MSLPAEEEDLADTVAKYDSIELKSIQDLETCEQQQLLQYVEKLHGIIRKY DTKLASYKQKLLHYVSREEKVSCDKASQATESELQECQYSMENDEDTNKK DQPNDLSATDAFSFVDEMRQAAKHAENLNNFVYEHTSGMYYDPKTGYYYN AEYGLYYDGNNGCYYSYDHAKDSYEFHSQAQANDAAKPESEDEDLEVQFD ELGGVITDHETLKKIKAEKQKAKDQAEKSKRKAKKKKSKKHSKKRSKKER RHKSKKRHRHSDDERSNDAEEGELSQSSDSSSDSSNEDSSSNTEDSSVPV FKAAGRFQDIAKKYPPSLRIIVQETNVESLKVGSLHLITYKGGSLGREGA HDVIIPDVNVSKCHLKFKYENKLGIYQCLDLGSRNGTILNGSPMSSDAMD LVHGSVITLGQTRLLCHVHEGNSTCGLCEPGLLIENSPPVVAAVASSTAS VLSHKEQLKKLQRKYGLENEKFVDTSGNGQSNYNDRAATRRVQVGSSTDK EKTEVACVNTEIGSSNKGFKMLSKLGWQKGEKLGKTNASAGLLEPINVVA NEGTSGLGNSDPVLSSSRTIDKRKLANLKITQARYQRASDMFGQSDDSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12318-PA | 611 | GF12318-PA | 17..611 | 17..599 | 1983 | 71.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20505-PA | 604 | GG20505-PA | 1..604 | 1..599 | 2753 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20421-PA | 636 | GH20421-PA | 19..636 | 17..599 | 1789 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8079-PB | 599 | CG8079-PB | 1..599 | 1..599 | 3092 | 100 | Plus |
CG8079-PA | 601 | CG8079-PA | 1..601 | 1..599 | 3079 | 99.7 | Plus |
CG8079-PC | 501 | CG8079-PC | 211..501 | 309..599 | 1490 | 100 | Plus |
CG8079-PC | 501 | CG8079-PC | 1..181 | 1..181 | 965 | 100 | Plus |
CG8079-PE | 229 | CG8079-PE | 1..181 | 1..181 | 965 | 100 | Plus |
CG8079-PD | 250 | CG8079-PD | 1..181 | 1..181 | 965 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19605-PA | 502 | GI19605-PA | 1..502 | 118..599 | 1598 | 70.4 | Plus |
Dmoj\GI19604-PA | 74 | GI19604-PA | 12..66 | 11..65 | 188 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11084-PA | 606 | GL11084-PA | 1..606 | 1..599 | 1947 | 72.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20808-PA | 616 | GA20808-PA | 1..616 | 1..599 | 1936 | 70.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21598-PA | 603 | GM21598-PA | 1..603 | 1..599 | 2888 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Hex-C-PA | 601 | GD11104-PA | 1..601 | 1..599 | 3085 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14969-PA | 623 | GJ14969-PA | 19..623 | 17..599 | 1811 | 64.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21767-PA | 615 | GK21767-PA | 33..615 | 17..599 | 1897 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13639-PA | 602 | GE13639-PA | 1..600 | 1..596 | 2743 | 93.2 | Plus |
Translation from 26 to 1825
> RE70407.hyp MSLPAEEEDLADTVAKYDSIELKSIQDLETCEQQQLLQYVEKLHGIIRKY DTKLASYKQKLLHYVSREEKVSCDKASQATESELQECQYSMENDEDTNKK DQPNDLSATDAFSFVDEMRQAAKHAENLNNFVYEHTSGMYYDPKTGYYYN AEYGLYYDGNNGCYYSYDHAKDSYEFHSQAQANDAAKPESEDEDLEVQFD ELGGVITDHETLKKIKAEKQKAKDQAEKSKRKAKKKKSKKHSKKRSKKER RHKSKKRHRHSDDERSNDAEEGELSQSSDSSSDSSNEDSSSNTEDSSVPV FKAAGRFQDIAKKYPPSLRIIVQETNVESLKVGSLHLITYKGGSLGREGA HDVIIPDVNVSKCHLKFKYENKLGIYQCLDLGSRNGTILNGSPMSSDAMD LVHGSVITLGQTRLLCHVHEGNSTCGLCEPGLLIENSPPVVAAVASSTAS VLSHKEQLKKLQRKYGLENEKFVDTSGNGQSNYNDRAATRRVQVGSSTDK EKTEVACVNTEIGSSNKGFKMLSKLGWQKGEKLGKTNASAGLLEPINVVA NEGTSGLGNSDPVLSSSRTIDKRKLANLKITQARYQRASDMFGQSDDSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8079-PB | 599 | CG8079-PB | 1..599 | 1..599 | 3092 | 100 | Plus |
CG8079-PA | 601 | CG8079-PA | 1..601 | 1..599 | 3079 | 99.7 | Plus |
CG8079-PC | 501 | CG8079-PC | 211..501 | 309..599 | 1490 | 100 | Plus |
CG8079-PC | 501 | CG8079-PC | 1..181 | 1..181 | 965 | 100 | Plus |
CG8079-PE | 229 | CG8079-PE | 1..181 | 1..181 | 965 | 100 | Plus |
CG8079-PD | 250 | CG8079-PD | 1..181 | 1..181 | 965 | 100 | Plus |