BDGP Sequence Production Resources |
Search the DGRC for RE70461
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 704 |
Well: | 61 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14234-RA |
Protein status: | RE70461.pep: gold |
Preliminary Size: | 1146 |
Sequenced Size: | 3647 |
Gene | Date | Evidence |
---|---|---|
CG14234 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14234 | 2002-04-22 | Blastp of sequenced clone |
CG14234 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14234 | 2008-04-29 | Release 5.5 accounting |
CG14234 | 2008-08-15 | Release 5.9 accounting |
CG14234 | 2008-12-18 | 5.12 accounting |
3647 bp (3647 high quality bases) assembled on 2002-04-22
GenBank Submission: AY113549
> RE70461.complete ACAAGCTATTCTGGCTTGGCCCCGATTGTAACGAATCCGTATCGCACGTC GCAGTGCGAAAATGTGTGCAAATACTGCAATGTACCCGCAGTAAATTGGC CGCAGGATCGCTTGACACTCGCTGCAAAAGGACATCCAGGTGCTACGCCC TATTTCGCAGTCAATCCAGCCAGGTGGTAGTATAGGTGTACAGGCATAGG TGTAACCAACCATGCCCCTGCGAACGGTGCAGGAATGCGGAGTCCTTTTG TGCCAGTGAAGAGCAACCAACACGAAACAACGCCACGAAGAGGACAATCC GCCAGTGCTGTGTAGAAGAACAAGAACCAGAACAACAAGGACAAGACCAA GAGCATCGAGTACACCAGATCGCAGATTCCGTTGAGAAGGGTCCGCCAAA AATTAGTCCGCCGGAATGAGGGTGGCGGCGGACATGGTGTATGACTACGG CAGCGAGGACTCCATGAGCACCACCCACCTGGACTGGCCCTTTCTCATCA AGGGCATCCTGGAGGGGCAGACGTGCACGCCCACTGCGCCGGAGCCGCTG GCCGCCATCCTGTGGGCCATCTTCGCCGTGTTTGGCATCGTGTACGCGCT ACTCGGCTACCGATGCCTGCGCGCCGTGGGCTTTCTCAGTGGACTGCTGG TGGGCGCCAACGGGATCTTCATTCTGCAGGACTTCCAGATCACCTTCCTG GGCAAGCCGGCGGACTCGGCGCTGGCCATTGTGGCGGGTTTGCTGGGCGC GGTGCTCGGCTCCACATATCCGGTGGCCTCTGTCCTCATTAGCGCCTTTG CCGGCGCCCTGCTCTCCGGCGCAGCCATGGCCGTCTGCGTGGCCACCTTT CCGGACAACGAGTTTGGGTACCGCGAGATCTATGTGGCCGTGGTGGGTGG AGCCGTCATCTGCTCCGTGCTGACCTTGTGCTGCGTGAAGTACGTGACCA TTCTCACCTCCAGCATTGTGGGCACGGCCATGATCCTCAGCGCCATCGAC TTCTTCACGCACGGTCTGGAGACCATCAATTGGATAATCGGCATGCGGCC GCATCCCTCGCCGCCACCTTGCTACGGTGGCCTCCTGATCGCCGCCTGGC CCGTCACCATTGTGCTCAGCATCATGGTGCAGTGCTTCATTACCGCCTGG CGCGTGGATCACCGCAAGCGGGTGTACATGCGGCATCACAACCATCCTGG CCACGCGCACGGCGCCCATCTGCCGCACAGCCAGCAGCAGGCGGGACCCA ACCACGGCATCGCTCCCGTCCGGCGATCCCAATCCCGCACCCGGGAGACG CGCGAGGAGGCCAGGCAGCGCAAGTTCCGCTATCTGTACCAGGTGCGCAC GGCCCGTGGTGACATCATATCGCAGAACTTCGTGTCGGCTCTGCAGAAGC GCATCCAGCTGAGCGGCACGGAGACGCCGTCGGAGAGATCGATAAAGAGC AGCTCAAACGAACGAAACACGTTCCGGAGCGACCGCACGCACTTCACCAC CATCCACGATCCGGACTCGGAGCTGTGCGACAAGATCGAGATCGTCCGTG ACATTGGATAACAAACAAGCAATAGCTACATGTAACTATACCCGTAGGGG GGCTACGGGCTGCGGTACTTGGGCGCGGATGTGGTCATGGTCGGGGGACA CAACTGTATGGTTGGATAGTTAAACGGGATTGGGGGCTCTAGGGAGCCGC CACGTAGAGCGGCGGAGGACTCACACAAGTACGGTTGCATGTAGACTTTT TAAGACGAGGCACCAAGTGCCGGACACAACACAAACGGAAGCGGAAATGG TGGCACAGAACCGAGTGGATGGTCATTGGAAGCTTTAAATATCAGAGGAT ATACGACGGATCTTTAGCTGGTTTCGCATGGAAGCCTTGGAGCTGGCGCC AGCCACAGATCAGGGGGACGAGATAGTCTAGACTAAGATTAATCGCATCG TGCACAGCTAGAGTCTAAGATGATGGACAGCACGGAAGGAAGCTGGCAGG AAGCTTTTGTTCTCTTCACTTAATCGAATGTTACTACAGATAGGAATACC TACACTACATATGTATGTAGCGATGGGCTGCGTGATGCATGATTGTGGTG GTGGATCATGGGTGCCTGAGATTCCTGTAACTACACTATACCCAACGCAG TACTCGTAGCTTCTCCCTTTTTCGTATATAGCCAGGCAATTGCAATTACT AATCCGGTTCATATCTGTGTTATAACTCTACGATTATAATGGGATGCATC CCAGCTGCAGGAGTTCCATTTCAACTATCTAGCATGATATTTATATATAT AAGCATTACGTTGTAAACTCCAAACACTCGATCATCGCACAGCAGTTTCT CGGAGGCTCAAGGCAGGCGAAAATACAATACAATACCTATTAAGTACAAT AAGAGAGGGTGGGGAGGGGGAGGGGGAAGTTGGAGCCATAGCCATCTAGA CTAGTAGTAGACTAGAACTAGGATTAGCCAGTTACCCGGATGAGCCAAAG CCACTAAGCCACTTAATTGTCGATACCAGTAAATCACAATCCGCTGCAAG GGGCGCACTTGGGGCTCGACCAAGTCAGAATCCAACGATCCGCTCGATCA GCCGTCTTAGCGTTATCCGTAAGATTAGCGTTCGAAATATATATATATAT ATATATATATATATACTTTAAGACATTAGATCCATGCAAACAGCGGTACA AACTTCAGAAATTCACGCTATATATGCTAGCCGAGACATACCAATTTAAG TGATATAAAGCATTTTAAACGGTCTGATTATGGGGCTTAATCGGGTTACT GGAGCGAAATGAGTCCGTGCATCTGGTTTTCAGAAGTCTTGTGGTCGTCT TCCATCCGCTTTTGTTTCCAAGCAACATTACATTTCATTTCAAAGTACGG ACGTATTTCTCAATCCACAGTACGGATTAAGCCCTTTTAGCTGGACACAC CTACAACCAATAAATAGATAAAGTGATGCGTTTAGGGGAAGAACTAGAAC TGGAAGGGTTCTTTCTCCAAGCCGCAAAGAAGGATTGGACATTGCCGGGC AGGAACTTCCATGTCGAATCGGTTGGTTTCCAAGTCGCAAACACCTATAC TAAATACAACTCGAGTTTCCTGTTAAGTTGATTAGCAATTAGTTTCTAGG AATGGCTGCCGTCCGCAATTGTTGATTTATTACTATCGAAGACTATAGAC TTTATATTTCCGAATTTTGTTCTCAAACTCAAGTGCTTATACTTTGATTC CTATTAGTTGTTCACTCTATCCTCCTGTCGTTCTAATGTTCAACAGCAAT GTCTAATGCAGCACGATAATGCATTTAACTTCGGCAAACAGTAGACGTTT TGTACGACACACTCAATTCGGTTTAATAAAATATATATATAAAAAAAAAG GATAATAACTGCAAACTAAAGTAGTGAAAATCATAAAAAGAGTTGCACAC ATGTATACACCACTAATGAAATCCAATTAAAAACTAATATAACAAAAAGG CCAAAAGCGATTATAACCAGAAAGAATCCGATTTCCGAATGAAATCAAGT CTTGAGACGACGGGCTGCCAAAGATTAAACAACTTGTAATGAGCAAACAG AAAAGTAATATTAAATAAACGATGCAGGCCGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14234-RA | 3749 | CG14234-RA | 116..3745 | 1..3630 | 18135 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 19626901..19629155 | 1372..3630 | 10760 | 98.8 | Plus |
chrX | 22417052 | chrX | 19624282..19624784 | 1..503 | 2470 | 99.4 | Plus |
chrX | 22417052 | chrX | 19625702..19626069 | 501..868 | 1825 | 99.7 | Plus |
chrX | 22417052 | chrX | 19626408..19626750 | 1033..1375 | 1715 | 100 | Plus |
chrX | 22417052 | chrX | 19626131..19626296 | 868..1033 | 800 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 19738194..19740452 | 1372..3630 | 11280 | 100 | Plus |
X | 23542271 | X | 19735574..19736076 | 1..503 | 2515 | 100 | Plus |
X | 23542271 | X | 19736994..19737361 | 501..868 | 1840 | 100 | Plus |
X | 23542271 | X | 19737701..19738043 | 1033..1375 | 1715 | 100 | Plus |
X | 23542271 | X | 19737423..19737588 | 868..1033 | 830 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 19746292..19748550 | 1372..3630 | 11280 | 99.9 | Plus |
X | 23527363 | X | 19743672..19744174 | 1..503 | 2515 | 100 | Plus |
X | 23527363 | X | 19745092..19745459 | 501..868 | 1840 | 100 | Plus |
X | 23527363 | X | 19745799..19746141 | 1033..1375 | 1715 | 100 | Plus |
X | 23527363 | X | 19745521..19745686 | 868..1033 | 830 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19624282..19624783 | 1..502 | 99 | -> | Plus |
chrX | 19625704..19626069 | 503..868 | 99 | -> | Plus |
chrX | 19626132..19626296 | 869..1033 | 98 | -> | Plus |
chrX | 19626409..19626750 | 1034..1375 | 100 | -> | Plus |
chrX | 19626905..19629155 | 1376..3631 | 96 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14234-RA | 1..1146 | 416..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14234-RA | 1..1146 | 416..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14234-RA | 1..1146 | 416..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14234-RA | 1..1146 | 416..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14234-RA | 1..1146 | 416..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14234-RA | 1..3630 | 1..3631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14234-RA | 1..3630 | 1..3631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14234-RA | 5..3634 | 1..3631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14234-RA | 1..3630 | 1..3631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14234-RA | 5..3634 | 1..3631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19735574..19736075 | 1..502 | 100 | -> | Plus |
X | 19736996..19737361 | 503..868 | 100 | -> | Plus |
X | 19737424..19737588 | 869..1033 | 100 | -> | Plus |
X | 19737702..19738043 | 1034..1375 | 100 | -> | Plus |
X | 19738198..19740452 | 1376..3631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19735574..19736075 | 1..502 | 100 | -> | Plus |
X | 19736996..19737361 | 503..868 | 100 | -> | Plus |
X | 19737424..19737588 | 869..1033 | 100 | -> | Plus |
X | 19737702..19738043 | 1034..1375 | 100 | -> | Plus |
X | 19738198..19740452 | 1376..3631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19735574..19736075 | 1..502 | 100 | -> | Plus |
X | 19736996..19737361 | 503..868 | 100 | -> | Plus |
X | 19737424..19737588 | 869..1033 | 100 | -> | Plus |
X | 19737702..19738043 | 1034..1375 | 100 | -> | Plus |
X | 19738198..19740452 | 1376..3631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19629607..19630108 | 1..502 | 100 | -> | Plus |
arm_X | 19631029..19631394 | 503..868 | 100 | -> | Plus |
arm_X | 19631457..19631621 | 869..1033 | 100 | -> | Plus |
arm_X | 19631735..19632076 | 1034..1375 | 100 | -> | Plus |
arm_X | 19632231..19634485 | 1376..3631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19743672..19744173 | 1..502 | 100 | -> | Plus |
X | 19745094..19745459 | 503..868 | 100 | -> | Plus |
X | 19745522..19745686 | 869..1033 | 100 | -> | Plus |
X | 19745800..19746141 | 1034..1375 | 100 | -> | Plus |
X | 19746296..19748550 | 1376..3631 | 99 | Plus |
Translation from 415 to 1560
> RE70461.hyp MRVAADMVYDYGSEDSMSTTHLDWPFLIKGILEGQTCTPTAPEPLAAILW AIFAVFGIVYALLGYRCLRAVGFLSGLLVGANGIFILQDFQITFLGKPAD SALAIVAGLLGAVLGSTYPVASVLISAFAGALLSGAAMAVCVATFPDNEF GYREIYVAVVGGAVICSVLTLCCVKYVTILTSSIVGTAMILSAIDFFTHG LETINWIIGMRPHPSPPPCYGGLLIAAWPVTIVLSIMVQCFITAWRVDHR KRVYMRHHNHPGHAHGAHLPHSQQQAGPNHGIAPVRRSQSRTRETREEAR QRKFRYLYQVRTARGDIISQNFVSALQKRIQLSGTETPSERSIKSSSNER NTFRSDRTHFTTIHDPDSELCDKIEIVRDIG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14234-PA | 381 | CG14234-PA | 1..381 | 1..381 | 1986 | 100 | Plus |
Translation from 415 to 1560
> RE70461.pep MRVAADMVYDYGSEDSMSTTHLDWPFLIKGILEGQTCTPTAPEPLAAILW AIFAVFGIVYALLGYRCLRAVGFLSGLLVGANGIFILQDFQITFLGKPAD SALAIVAGLLGAVLGSTYPVASVLISAFAGALLSGAAMAVCVATFPDNEF GYREIYVAVVGGAVICSVLTLCCVKYVTILTSSIVGTAMILSAIDFFTHG LETINWIIGMRPHPSPPPCYGGLLIAAWPVTIVLSIMVQCFITAWRVDHR KRVYMRHHNHPGHAHGAHLPHSQQQAGPNHGIAPVRRSQSRTRETREEAR QRKFRYLYQVRTARGDIISQNFVSALQKRIQLSGTETPSERSIKSSSNER NTFRSDRTHFTTIHDPDSELCDKIEIVRDIG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20214-PA | 384 | GF20214-PA | 1..384 | 1..381 | 1898 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19252-PA | 381 | GG19252-PA | 1..381 | 1..381 | 2019 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17691-PA | 429 | GH17691-PA | 57..429 | 6..381 | 1639 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14234-PA | 381 | CG14234-PA | 1..381 | 1..381 | 1986 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16099-PA | 409 | GI16099-PA | 30..409 | 6..381 | 1679 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15015-PA | 383 | GL15015-PA | 1..383 | 1..381 | 1804 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12847-PA | 383 | GA12847-PA | 1..383 | 1..381 | 1812 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22989-PA | 267 | GM22989-PA | 1..206 | 1..206 | 1061 | 99.5 | Plus |
Dsec\GM22989-PA | 267 | GM22989-PA | 202..267 | 316..381 | 333 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15747-PA | 403 | GJ15747-PA | 31..403 | 6..381 | 1700 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17356-PA | 404 | GK17356-PA | 1..404 | 1..381 | 1655 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15871-PA | 62 | GE15871-PA | 1..41 | 1..46 | 160 | 71.7 | Plus |