BDGP Sequence Production Resources |
Search the DGRC for RE70528
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 705 |
Well: | 28 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG13640-RA |
Protein status: | RE70528.pep: gold |
Preliminary Size: | 399 |
Sequenced Size: | 519 |
Gene | Date | Evidence |
---|---|---|
CG13640 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13640 | 2002-06-03 | Blastp of sequenced clone |
CG13640 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13640 | 2008-04-29 | Release 5.5 accounting |
CG13640 | 2008-08-15 | Release 5.9 accounting |
CG13640 | 2008-12-18 | 5.12 accounting |
519 bp (519 high quality bases) assembled on 2002-06-03
GenBank Submission: AY118415
> RE70528.complete AGAACTGGAAGTGATTCGAAATCGAAGCAAGATGAGATCCCGCGATTCCC GATTGACTATCCTAACATTGCTGATTGCGTGCTGCCTGGATTCGAGTGGC GCTCTGTTCTTCAAGTCCTGGAAGACGGGAAAAGGATATACTGGATATAG TGGAGTACAAGACTATGGAGGCTACGGTCAGGGAAACTACGGCTATGGAA GCTATGCTGGAGGATATGGTTACAACTATCCCGCATATAATTCCTACTCT TACCCAGCTTACTCAGGCCACTCCTCTTACTCATACTCCAAAGGAGGACG CAAGCCTTCTGGAAACCGCAAAGGACGCACTTACTCGGACATTCGAAGAG TTATAAATCCCGATCCATACATCGGTCCTGGAGGCAGTCGCTTCCTGCCC CGTACTCCATATTCCGCCCTTTGGGGTTAACGATTCGACCGTCTGAACTC GCATTGTTGTCAGCAGTATTAGCCATTAAAATAAAATCAGCGAAAGTTAC ATCTAAAAAAAAAGAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13640-RA | 504 | CG13640-RA | 1..504 | 1..504 | 2520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20684843..20685348 | 506..1 | 2530 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24861657..24862162 | 506..1 | 2530 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24602488..24602993 | 506..1 | 2530 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20684836..20685348 | 1..514 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13640-RA | 1..399 | 32..430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13640-RA | 1..399 | 32..430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13640-RA | 1..399 | 32..430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13640-RA | 1..399 | 32..430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13640-RA | 1..399 | 32..430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13640-RA | 1..512 | 1..512 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13640-RA | 1..504 | 1..504 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13640-RA | 4..507 | 1..504 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13640-RA | 1..512 | 1..512 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13640-RA | 4..507 | 1..504 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24861650..24862162 | 1..514 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24861650..24862162 | 1..514 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24861650..24862162 | 1..514 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20687372..20687884 | 1..514 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24602481..24602993 | 1..514 | 99 | Minus |
Translation from 0 to 429
> RE70528.hyp ELEVIRNRSKMRSRDSRLTILTLLIACCLDSSGALFFKSWKTGKGYTGYS GVQDYGGYGQGNYGYGSYAGGYGYNYPAYNSYSYPAYSGHSSYSYSKGGR KPSGNRKGRTYSDIRRVINPDPYIGPGGSRFLPRTPYSALWG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13640-PA | 132 | CG13640-PA | 1..132 | 11..142 | 734 | 100 | Plus |
Translation from 31 to 429
> RE70528.pep MRSRDSRLTILTLLIACCLDSSGALFFKSWKTGKGYTGYSGVQDYGGYGQ GNYGYGSYAGGYGYNYPAYNSYSYPAYSGHSSYSYSKGGRKPSGNRKGRT YSDIRRVINPDPYIGPGGSRFLPRTPYSALWG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19930-PA | 140 | GF19930-PA | 1..140 | 1..132 | 318 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12309-PA | 135 | GG12309-PA | 1..135 | 1..132 | 432 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13640-PA | 132 | CG13640-PA | 1..132 | 1..132 | 734 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22197-PA | 140 | GI22197-PA | 98..140 | 90..132 | 134 | 60.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13557-PA | 133 | GL13557-PA | 1..133 | 1..132 | 226 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12428-PA | 133 | GA12428-PA | 1..133 | 1..132 | 230 | 52.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23451-PA | 136 | GM23451-PA | 1..136 | 1..132 | 451 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18257-PA | 136 | GD18257-PA | 1..136 | 1..132 | 475 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24316-PA | 130 | GJ24316-PA | 6..130 | 8..132 | 146 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22756-PA | 227 | GK22756-PA | 1..112 | 1..132 | 175 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10764-PA | 135 | GE10764-PA | 1..135 | 1..132 | 255 | 59.3 | Plus |