BDGP Sequence Production Resources |
Search the DGRC for RE70574
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 705 |
Well: | 74 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG31855-RA |
Protein status: | RE70574.pep: gold |
Sequenced Size: | 1053 |
Gene | Date | Evidence |
---|---|---|
CG31855 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31855 | 2004-10-02 | Blastp of sequenced clone |
CG31855 | 2008-04-29 | Release 5.5 accounting |
CG31855 | 2008-08-15 | Release 5.9 accounting |
CG31855 | 2008-12-18 | 5.12 accounting |
1053 bp (1053 high quality bases) assembled on 2006-06-05
GenBank Submission: BT015978
> RE70574.complete AAGTTAAATTTTTGTGAGTTGCTACACAAAAAACGTAAAAAAGAAGACAG TTCTCTCGAAATATTGATAGATCAACAAAGATTAAAGTGAGCAACCCAAA AGCAGAATGTCAGTACGAGACTTTATCAAGGGTCTGCCCATACACGATTC GAGCAATTTTACCCATTTGAGCAACGAACATGGAATTCGAACGTCGCAGA AGCGTGCCTCCGTCTACCTGCCCACCGAGGATGAGCATTCAGAGCAGCTG ATCGTGATGGACAAGCGATGTGTCCTGCTGCGCTACCTCACTCAGCAGTG GGACAAAAAGACGCTTCAGCGGAAGAGGGAGCACGGCGGCGATTCGGGAA ATGGCAACGGCAACAGCTCCACGCCCAACGGCAACAGCACCAACAGCAAA AAGCGCCCGCGCTTGGACCCCAACGAGCTGAACTGAGCTGGGCGGCAGGA CCTTAAGCCAAGCACCCGATGGACATCCCCACGCAGCACTACTATCCCGA GCGAACACGCAGCCGCCACCATTCATTTACACTCATATACATATATATTA AATAAAATATACTAAGTACAAAGGAGTTGCAGTCGAACGGTCCTTTCAAA GTTTTGTATCACGCTGATCATTGGTCGAAAGCCCCAGTATTTCTTTAGAT TTCAGTTGTACCCAAATTAACACAGCTAAATAATGTTTTTGTGACCAACA TATGCATACCTCCTTTTGCAAGAAAATACCATCATTCGTATAAAATGCCG AGTACAAAATTTTGTAAGCTTTGTTACTGCTAGTTCATGAATCACGGTAT TTTTTTTTCCATTCTTTGGACTTACCTTAGGAAAATATACATGTACTTCT CGCAAAGTTTGTAACCTAAAATGTAATGCGTTTATAATCTGGGAATTGAT CTGCATAACCAATTGTATACACTATTATTGTAAATTGGCAATGAATTATT TTGGCAGAAGGAAGATCGACTGAATTCCAGTACAACACATTTATAATAGC ACATAATGTGAGTTCCAATAGATTTACTTTTAAAGGCAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31855-RA | 1136 | CG31855-RA | 88..1127 | 1..1040 | 5155 | 99.7 | Plus |
CG31855.a | 1075 | CG31855.a | 41..1075 | 1..1040 | 5055 | 99.2 | Plus |
CG31855-RB | 1142 | CG31855-RB | 192..1142 | 90..1040 | 4725 | 99.7 | Plus |
CG31855-RB | 1142 | CG31855-RB | 41..131 | 1..91 | 440 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 809..859 | 576..525 | 113 | 71.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13367908..13367996 | 1..91 | 96 | -> | Plus |
chr2L | 13368059..13369005 | 92..1037 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31855-RB | 1..330 | 107..436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31855-RB | 1..330 | 107..436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31855-RA | 1..330 | 107..436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31855-RB | 1..330 | 107..436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31855-RA | 1..330 | 107..436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31855-RA | 41..1077 | 1..1037 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31855-RA | 41..1077 | 1..1037 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31855-RA | 30..1064 | 1..1035 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31855-RA | 41..1077 | 1..1037 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31855-RA | 30..1064 | 1..1035 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13369233..13369323 | 1..91 | 98 | -> | Plus |
2L | 13369386..13370331 | 92..1037 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13369233..13369323 | 1..91 | 98 | -> | Plus |
2L | 13369386..13370331 | 92..1037 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13369233..13369323 | 1..91 | 98 | -> | Plus |
2L | 13369386..13370331 | 92..1037 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13369233..13369323 | 1..91 | 98 | -> | Plus |
arm_2L | 13369386..13370331 | 92..1037 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13369233..13369323 | 1..91 | 98 | -> | Plus |
2L | 13369386..13370331 | 92..1037 | 99 | Plus |
Translation from 106 to 435
> RE70574.pep MSVRDFIKGLPIHDSSNFTHLSNEHGIRTSQKRASVYLPTEDEHSEQLIV MDKRCVLLRYLTQQWDKKTLQRKREHGGDSGNGNGNSSTPNGNSTNSKKR PRLDPNELN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23128-PA | 110 | GF23128-PA | 1..110 | 1..109 | 414 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23844-PA | 109 | GG23844-PA | 1..109 | 1..109 | 563 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13461-PA | 107 | GH13461-PA | 1..107 | 1..109 | 454 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31855-PB | 109 | CG31855-PB | 1..109 | 1..109 | 580 | 100 | Plus |
CG31855-PA | 109 | CG31855-PA | 1..109 | 1..109 | 580 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17215-PA | 107 | GI17215-PA | 1..107 | 1..109 | 381 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26047-PA | 106 | GL26047-PA | 1..106 | 1..109 | 500 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16526-PA | 106 | GA16526-PA | 1..106 | 1..109 | 500 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10443-PA | 109 | GM10443-PA | 1..109 | 1..109 | 569 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23893-PA | 109 | GD23893-PA | 1..109 | 1..109 | 569 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17972-PA | 107 | GJ17972-PA | 1..107 | 1..109 | 457 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15284-PA | 108 | GK15284-PA | 1..107 | 1..109 | 432 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18649-PA | 109 | GE18649-PA | 1..109 | 1..109 | 574 | 99.1 | Plus |
Translation from 106 to 435
> RE70574.hyp MSVRDFIKGLPIHDSSNFTHLSNEHGIRTSQKRASVYLPTEDEHSEQLIV MDKRCVLLRYLTQQWDKKTLQRKREHGGDSGNGNGNSSTPNGNSTNSKKR PRLDPNELN*