BDGP Sequence Production Resources |
Search the DGRC for RE70632
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 706 |
Well: | 32 |
Vector: | pFlc-1 |
Associated Gene/Transcript | mRNA-cap-RA |
Protein status: | RE70632.pep: gold |
Sequenced Size: | 2255 |
Gene | Date | Evidence |
---|---|---|
CG1810 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1810 | 2003-07-07 | Blastp of sequenced clone |
mRNA-capping-enzyme | 2008-04-29 | Release 5.5 accounting |
mRNA-capping-enzyme | 2008-08-15 | Release 5.9 accounting |
mRNA-capping-enzyme | 2008-12-18 | 5.12 accounting |
2255 bp (2255 high quality bases) assembled on 2003-07-07
GenBank Submission: BT009965
> RE70632.complete ACATATATATTCCACATCTCTAGACAAATCCTACACAGAATTCCCAGGCC CGCGAGTTCTCGCTGCATCTGCATCCACCACAATCTGCACCAGCAATAAA CCACCTAACACAAACGCAACGGCGTCGTCCCATCGCTGCGCCCGCCGTTT CCATCGTCGTCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGG AGGAGGAGGAGCAGGAGAGGCGGAGCCACTGTGGCACTATGGCCCTAACT AATCGGGATCGGGAACGGGGCTCTGGTCCATTGCCCAATCGCTGGCTATA CTGTCCGCGCAAGAGCGATACCATCATTGCGGAACGCTTCCTGGCCTTTA AGACCCCGCTGAGCAATAACTTTCACGACAAGATGCCCATCGAGTGCACC TTTCAACCCGAGATGCTCTTCGAATACTGCAAAACGCTAAAGGTGAAACT GGGCCTCTGGGTTGACCTGACCAATACGAAACGATTCTACGATCGATCCG CAGTGGAGGAGCTCGGCGCGAAATATATTAAGCTGCAGTGCCGTGGACAT GGCGAGACGCCATCGCCGGAGCAGACGCACAGTTTCATCGAGATCGTGGA CAACTTTATTAACGAACGTCCATTTGACGTTATAGCCGTGCACTGCACGC ACGGTTTCAATCGCACTGGCTTCCTGATTGTCTGCTATTTGGTCGAGCGA CTCGATTGCTCCGTTTCGGCAGCGCTCGCTATCTTTGCCAGCGCCCGGCC GCCGGGCATCTACAAGCAGGATTACATCAACGAGCTGTACAAACGCTACG AGGACACGAATGCCGCTCCAGCGGCACCAGAACAGCCCAATTGGTGCCTG GACTATGATGATGGCAACGGCGATGGTTTTGTGCAGGACAACTCCTCATC CACGTCACAGCAGGCCGGCGAGCAGGATGACGACGCCGAGGAGGTGGAGG GAGAGGATGCGGGCGGCGACTGTGACGCCTCCACGTCGGACGGTCAGCCG CGTAAGAAGCGACGGCGCGAAATGATCATCAAGAATGCCACCTTTATGGC GGGAGTGCCGGGCGTGCGACAGGTGAGCGATCAGCCGCGACTGGGCGATC TGCAGCGTAAGGTGCAGGACTGGTGCGACTGGAAGAAGAACGGCTTCCCT GGCGCACAGCCCGTCTCCATGGACAGGGAGAACATAAAGCGGCTAAGCGA GATACCGTATCGTGTGTCGTGGAAGGCGGACGGTACACGTTATATGATGC TCATCGATGGAAGGGACGAGGTATATTTCTTCGATCGCAATCACTCCTGT TTCCAGGTGGAGAATGTGACATTTGTGGAGAGCAGGAACCTAAACGAGCA TCTCGACGGCACTCTCGTCGACGGGGAGATGGTGCTGGACAAGATCGGCG AGACCGTAACGCCGCGCTACCTCATCTACGACATTGTGCGATTATCGAAT CGCGATGTGCGGGACGAGCCATTCTATCCAAATCGACTGGACTACATTAA GACGGAAGTTATAGGTCCCCGAATCCTGGGCATGAAGCATGGCATCATCA ATCAGCGGCTGCAGGCGTTCAGTGTGCGCGGCAAGGACTTCTGGGACATT TGGATGTCTGCCCGGCTGCTGGGTGAGAAATTCTCGCGGACACTGGCACA CGAACCGGATGGCCTCATCTTCCAGCCATCAAAGCAGCCCTACACGGCTG GCACATGCTCCGATGTCTTCAAATGGAAGCCACATGAGCTCAACTCGGTG GACTTTCGGCTGAAGATCATAACAGAGCGCGGCGAGGGCTTGCTGACGAA AAAGGTGGGCTTCCTCTATGTCGGCGGACACGATGCACCCTATGGACGGA TGCAAAGGTTAACGAAGGAGACCAGAGAATTGGACAACAGAATCGTTGAG TGCACCATGAATCAGTTTGGCAACTGGGACTTTATGCGCGAGCGAACGGA CAAAAAGAATCCCAACAGTTATAATACAGCCCGCTCCGTTGTGGACAGCA TAAAGCATCCAGTCACCAAGGAGTACCTACTAAACTTTATCGCAAGCTCT GGCTATCGGAATGATCATGTCATGATGCCGCCGCCGATCAATTCCCATAA CCAAAACCACAACCATAACCACTTTTATCCCCATGGTCATGGCCAACACC AGCGTCGTCCCTGCGTGAACCCGACATTAGGAAATTAATCAGAGCGTAAT AAAAAAAGAAAGAATAAAATTAATCGTGAGTTATGTACCAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRNA-capping-enzyme-RA | 2466 | mRNA-capping-enzyme-RA | 71..2315 | 1..2245 | 11210 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 14131926..14132861 | 1376..441 | 4650 | 99.8 | Minus |
chrX | 22417052 | chrX | 14132919..14133365 | 447..1 | 2220 | 99.8 | Minus |
chrX | 22417052 | chrX | 14131398..14131673 | 1788..1513 | 1365 | 99.6 | Minus |
chrX | 22417052 | chrX | 14130813..14131066 | 2239..1986 | 1270 | 100 | Minus |
chrX | 22417052 | chrX | 14131134..14131331 | 1985..1788 | 990 | 100 | Minus |
chrX | 22417052 | chrX | 14131724..14131865 | 1516..1375 | 710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 14241380..14242315 | 1376..441 | 4680 | 100 | Minus |
X | 23542271 | X | 14242373..14242819 | 447..1 | 2235 | 100 | Minus |
X | 23542271 | X | 14240852..14241127 | 1788..1513 | 1380 | 100 | Minus |
X | 23542271 | X | 14240261..14240520 | 2245..1986 | 1285 | 99.6 | Minus |
X | 23542271 | X | 14240588..14240785 | 1985..1788 | 990 | 100 | Minus |
X | 23542271 | X | 14241178..14241319 | 1516..1375 | 710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 14249478..14250413 | 1376..441 | 4680 | 100 | Minus |
X | 23527363 | X | 14250471..14250917 | 447..1 | 2235 | 100 | Minus |
X | 23527363 | X | 14248950..14249225 | 1788..1513 | 1380 | 100 | Minus |
X | 23527363 | X | 14248359..14248618 | 2245..1986 | 1285 | 99.6 | Minus |
X | 23527363 | X | 14248686..14248883 | 1985..1788 | 990 | 100 | Minus |
X | 23527363 | X | 14249276..14249417 | 1516..1375 | 710 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 14130813..14131066 | 1986..2239 | 100 | <- | Minus |
chrX | 14131134..14131330 | 1789..1985 | 100 | <- | Minus |
chrX | 14131398..14131671 | 1515..1788 | 99 | <- | Minus |
chrX | 14131726..14131864 | 1376..1514 | 100 | <- | Minus |
chrX | 14131927..14132859 | 443..1375 | 99 | <- | Minus |
chrX | 14132924..14133365 | 1..442 | 91 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRNA-capping-enzyme-RA | 1..1950 | 239..2188 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRNA-capping-enzyme-RA | 1..1950 | 239..2188 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRNA-cap-RA | 1..1950 | 239..2188 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRNA-capping-enzyme-RA | 1..1950 | 239..2188 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRNA-cap-RA | 1..1950 | 239..2188 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRNA-capping-enzyme-RA | 1..2239 | 1..2239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRNA-capping-enzyme-RA | 1..2239 | 1..2239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRNA-cap-RA | 4..2242 | 1..2239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRNA-capping-enzyme-RA | 1..2239 | 1..2239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRNA-cap-RA | 4..2242 | 1..2239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14240588..14240784 | 1789..1985 | 100 | <- | Minus |
X | 14240267..14240520 | 1986..2239 | 100 | <- | Minus |
X | 14240852..14241125 | 1515..1788 | 100 | <- | Minus |
X | 14241180..14241318 | 1376..1514 | 100 | <- | Minus |
X | 14241381..14242313 | 443..1375 | 100 | <- | Minus |
X | 14242378..14242819 | 1..442 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14240588..14240784 | 1789..1985 | 100 | <- | Minus |
X | 14240267..14240520 | 1986..2239 | 100 | <- | Minus |
X | 14240852..14241125 | 1515..1788 | 100 | <- | Minus |
X | 14241180..14241318 | 1376..1514 | 100 | <- | Minus |
X | 14241381..14242313 | 443..1375 | 100 | <- | Minus |
X | 14242378..14242819 | 1..442 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14240588..14240784 | 1789..1985 | 100 | <- | Minus |
X | 14240267..14240520 | 1986..2239 | 100 | <- | Minus |
X | 14240852..14241125 | 1515..1788 | 100 | <- | Minus |
X | 14241180..14241318 | 1376..1514 | 100 | <- | Minus |
X | 14241381..14242313 | 443..1375 | 100 | <- | Minus |
X | 14242378..14242819 | 1..442 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 14134300..14134553 | 1986..2239 | 100 | <- | Minus |
arm_X | 14134621..14134817 | 1789..1985 | 100 | <- | Minus |
arm_X | 14134885..14135158 | 1515..1788 | 100 | <- | Minus |
arm_X | 14135213..14135351 | 1376..1514 | 100 | <- | Minus |
arm_X | 14135414..14136346 | 443..1375 | 100 | <- | Minus |
arm_X | 14136411..14136852 | 1..442 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14248365..14248618 | 1986..2239 | 100 | <- | Minus |
X | 14248686..14248882 | 1789..1985 | 100 | <- | Minus |
X | 14248950..14249223 | 1515..1788 | 100 | <- | Minus |
X | 14249278..14249416 | 1376..1514 | 100 | <- | Minus |
X | 14249479..14250411 | 443..1375 | 100 | <- | Minus |
X | 14250476..14250917 | 1..442 | 100 | Minus |
Translation from 238 to 2187
> RE70632.hyp MALTNRDRERGSGPLPNRWLYCPRKSDTIIAERFLAFKTPLSNNFHDKMP IECTFQPEMLFEYCKTLKVKLGLWVDLTNTKRFYDRSAVEELGAKYIKLQ CRGHGETPSPEQTHSFIEIVDNFINERPFDVIAVHCTHGFNRTGFLIVCY LVERLDCSVSAALAIFASARPPGIYKQDYINELYKRYEDTNAAPAAPEQP NWCLDYDDGNGDGFVQDNSSSTSQQAGEQDDDAEEVEGEDAGGDCDASTS DGQPRKKRRREMIIKNATFMAGVPGVRQVSDQPRLGDLQRKVQDWCDWKK NGFPGAQPVSMDRENIKRLSEIPYRVSWKADGTRYMMLIDGRDEVYFFDR NHSCFQVENVTFVESRNLNEHLDGTLVDGEMVLDKIGETVTPRYLIYDIV RLSNRDVRDEPFYPNRLDYIKTEVIGPRILGMKHGIINQRLQAFSVRGKD FWDIWMSARLLGEKFSRTLAHEPDGLIFQPSKQPYTAGTCSDVFKWKPHE LNSVDFRLKIITERGEGLLTKKVGFLYVGGHDAPYGRMQRLTKETRELDN RIVECTMNQFGNWDFMRERTDKKNPNSYNTARSVVDSIKHPVTKEYLLNF IASSGYRNDHVMMPPPINSHNQNHNHNHFYPHGHGQHQRRPCVNPTLGN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRNA-cap-PA | 649 | CG1810-PA | 1..649 | 1..649 | 3527 | 100 | Plus |
CG13197-PB | 343 | CG13197-PB | 5..170 | 15..183 | 242 | 34.9 | Plus |
CG13197-PA | 343 | CG13197-PA | 5..170 | 15..183 | 242 | 34.9 | Plus |
Translation from 238 to 2187
> RE70632.pep MALTNRDRERGSGPLPNRWLYCPRKSDTIIAERFLAFKTPLSNNFHDKMP IECTFQPEMLFEYCKTLKVKLGLWVDLTNTKRFYDRSAVEELGAKYIKLQ CRGHGETPSPEQTHSFIEIVDNFINERPFDVIAVHCTHGFNRTGFLIVCY LVERLDCSVSAALAIFASARPPGIYKQDYINELYKRYEDTNAAPAAPEQP NWCLDYDDGNGDGFVQDNSSSTSQQAGEQDDDAEEVEGEDAGGDCDASTS DGQPRKKRRREMIIKNATFMAGVPGVRQVSDQPRLGDLQRKVQDWCDWKK NGFPGAQPVSMDRENIKRLSEIPYRVSWKADGTRYMMLIDGRDEVYFFDR NHSCFQVENVTFVESRNLNEHLDGTLVDGEMVLDKIGETVTPRYLIYDIV RLSNRDVRDEPFYPNRLDYIKTEVIGPRILGMKHGIINQRLQAFSVRGKD FWDIWMSARLLGEKFSRTLAHEPDGLIFQPSKQPYTAGTCSDVFKWKPHE LNSVDFRLKIITERGEGLLTKKVGFLYVGGHDAPYGRMQRLTKETRELDN RIVECTMNQFGNWDFMRERTDKKNPNSYNTARSVVDSIKHPVTKEYLLNF IASSGYRNDHVMMPPPINSHNQNHNHNHFYPHGHGQHQRRPCVNPTLGN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15987-PA | 672 | GF15987-PA | 18..637 | 12..618 | 2865 | 84.4 | Plus |
Dana\GF11454-PA | 369 | GF11454-PA | 3..172 | 14..185 | 263 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19463-PA | 652 | GG19463-PA | 1..621 | 1..613 | 2939 | 88.6 | Plus |
Dere\GG20215-PA | 302 | GG20215-PA | 2..187 | 12..202 | 261 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11798-PA | 642 | GH11798-PA | 1..637 | 1..616 | 2627 | 74.7 | Plus |
Dgri\GH22885-PA | 378 | GH22885-PA | 2..170 | 11..183 | 283 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRNA-cap-PA | 649 | CG1810-PA | 1..649 | 1..649 | 3527 | 100 | Plus |
CG13197-PB | 343 | CG13197-PB | 5..170 | 15..183 | 242 | 34.9 | Plus |
CG13197-PA | 343 | CG13197-PA | 5..170 | 15..183 | 242 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15976-PA | 638 | GI15976-PA | 1..633 | 3..616 | 2644 | 75.5 | Plus |
Dmoj\GI21271-PA | 388 | GI21271-PA | 5..171 | 15..183 | 273 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14931-PA | 599 | GL14931-PA | 1..599 | 1..611 | 2414 | 73.2 | Plus |
Dper\GL10081-PA | 385 | GL10081-PA | 5..172 | 15..185 | 251 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14791-PA | 655 | GA14791-PA | 1..653 | 1..638 | 2658 | 75.6 | Plus |
Dpse\GA12112-PA | 385 | GA12112-PA | 5..172 | 15..185 | 254 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17561-PA | 651 | GM17561-PA | 1..651 | 1..649 | 3383 | 95.2 | Plus |
Dsec\GM21302-PA | 351 | GM21302-PA | 5..170 | 15..183 | 253 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15855-PA | 651 | GD15855-PA | 1..651 | 1..649 | 3379 | 94.9 | Plus |
Dsim\GD10810-PA | 402 | GD10810-PA | 5..170 | 15..183 | 258 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19096-PA | 637 | GJ19096-PA | 1..632 | 1..616 | 2657 | 77.1 | Plus |
Dvir\GJ20873-PA | 401 | GJ20873-PA | 5..171 | 15..183 | 265 | 35.5 | Plus |